RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 CWC25Q9NXE8 425 aaPredicted RBP18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 RNF123Q5XPI4 1314 aa18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 SLC3A2P08195 630 aaKnown RBP18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 NGLY1Q96IV0 654 aa18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 KDM4AO75164 1064 aa18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 ALDH1L1O75891 902 aa18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
PPFIA4-205ENST00000486360 GPTP24298 496 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 BRMS1Q9HCU9 246 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 IQGAP3Q86VI3 1631 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 TET3O43151 1660 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 SHROOM2Q13796 1616 aa18.46■□□□□ 0.55
PPFIA4-205ENST00000486360 METP08581 1390 aa18.45■□□□□ 0.54
PPFIA4-205ENST00000486360 KIF1BO60333 1816 aa18.45■□□□□ 0.54
PPFIA4-205ENST00000486360 MTMR7Q9Y216 660 aa18.45■□□□□ 0.54
PPFIA4-205ENST00000486360 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 KRT85P78386 507 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 CHL1O00533 1208 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 SDSP20132 328 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 ZNF396Q96N95 335 aaPredicted RBP18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 DCTPP1Q9H773 170 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 GRM8O00222 908 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 PDE1AP54750 535 aa18.44■□□□□ 0.54
PPFIA4-205ENST00000486360 LETM1O95202 739 aaPredicted RBP18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 JARID2Q92833 1246 aaPredicted RBP18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 SOS1Q07889 1333 aaPredicted RBP18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 KINO60870 393 aaKnown RBP18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 CEP85Q6P2H3 762 aa18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 LINS1Q8NG48 757 aa18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 ABCC3O15438 1527 aa18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 ATP2B1P20020 1258 aa18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 RAI14Q9P0K7 980 aa18.43■□□□□ 0.54
PPFIA4-205ENST00000486360 TDO2P48775 406 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 CEBPZQ03701 1054 aaKnown RBP18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 CCDC47Q96A33 483 aaKnown RBP18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 SYNMO15061 1565 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 TPM3P06753 285 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 STK38Q15208 465 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 ANKRD18BA2A2Z9 1011 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 IMMTQ16891 758 aaKnown RBP18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 STK11IPQ8N1F8 1099 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 AIDAQ96BJ3 306 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 ABCF2Q9UG63 623 aa18.42■□□□□ 0.54
PPFIA4-205ENST00000486360 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
PPFIA4-205ENST00000486360 TSPOAP1O95153 1857 aa18.41■□□□□ 0.54
PPFIA4-205ENST00000486360 IL2RBP14784 551 aa18.41■□□□□ 0.54
PPFIA4-205ENST00000486360 DCAF5Q96JK2 942 aa18.41■□□□□ 0.54
PPFIA4-205ENST00000486360 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
PPFIA4-205ENST00000486360 TPM1P09493 284 aa18.41■□□□□ 0.54
PPFIA4-205ENST00000486360 KAT6BQ8WYB5 2073 aa18.4■□□□□ 0.54
PPFIA4-205ENST00000486360 ZPR1O75312 459 aa18.4■□□□□ 0.54
PPFIA4-205ENST00000486360 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
PPFIA4-205ENST00000486360 PDIA4P13667 645 aaKnown RBP18.4■□□□□ 0.54
PPFIA4-205ENST00000486360 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
PPFIA4-205ENST00000486360 CCDC83Q8IWF9 413 aa18.4■□□□□ 0.54
PPFIA4-205ENST00000486360 C16orf71Q8IYS4 520 aaPredicted RBP18.4■□□□□ 0.54
PPFIA4-205ENST00000486360 TSR1Q2NL82 804 aaKnown RBP18.39■□□□□ 0.54
PPFIA4-205ENST00000486360 G2E3Q7L622 706 aa18.39■□□□□ 0.54
PPFIA4-205ENST00000486360 TSPY26PQ9H489 355 aa18.39■□□□□ 0.54
PPFIA4-205ENST00000486360 CCDC69A6NI79 296 aa18.39■□□□□ 0.53
PPFIA4-205ENST00000486360 PLEKHG1Q9ULL1 1385 aa18.39■□□□□ 0.53
PPFIA4-205ENST00000486360 ANKRD20A12PQ8NF67 263 aa18.39■□□□□ 0.53
PPFIA4-205ENST00000486360 PHAXQ9H814 394 aaKnown RBP18.39■□□□□ 0.53
PPFIA4-205ENST00000486360 UNC13BO14795 1591 aa18.38■□□□□ 0.53
PPFIA4-205ENST00000486360 PIP4K2AP48426 406 aaPredicted RBP18.38■□□□□ 0.53
PPFIA4-205ENST00000486360 NAT10Q9H0A0 1025 aaKnown RBP18.38■□□□□ 0.53
PPFIA4-205ENST00000486360 CDC42BPBQ9Y5S2 1711 aa18.38■□□□□ 0.53
PPFIA4-205ENST00000486360 ARHGAP31Q2M1Z3 1444 aa18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 TPM2P07951 284 aa18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 CTDP1Q9Y5B0 961 aaPredicted RBP18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 KLHL34Q8N239 644 aa18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 JMYQ8N9B5 988 aa18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 UBAC1Q9BSL1 405 aa18.37■□□□□ 0.53
PPFIA4-205ENST00000486360 GOLIM4O00461 696 aa18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 CDKL5O76039 1030 aa18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 CWF19L2Q2TBE0 894 aaKnown RBP18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 DDX11Q96FC9 970 aa18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 DDX21Q9NR30 783 aaKnown RBP eCLIP18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 SLC5A1P13866 664 aa18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 ME1P48163 572 aa18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 LMBR1LQ6UX01 489 aa18.36■□□□□ 0.53
PPFIA4-205ENST00000486360 CAVIN4Q5BKX8 364 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 ARHGEF10O15013 1369 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 CROCC2H7BZ55 1655 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 MAP3K12Q12852 859 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms