RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 COL15A1P39059 1388 aa24.69■■□□□ 1.54
RHBDF1-209ENST00000486045 NFIXQ14938 502 aa24.68■■□□□ 1.54
RHBDF1-209ENST00000486045 NARFQ9UHQ1 456 aa24.68■■□□□ 1.54
RHBDF1-209ENST00000486045 COL3A1P02461 1466 aaPredicted RBP24.67■■□□□ 1.54
RHBDF1-209ENST00000486045 BCL2L12Q9HB09 334 aa24.67■■□□□ 1.54
RHBDF1-209ENST00000486045 U2SURPO15042 1029 aaKnown RBP24.66■■□□□ 1.54
RHBDF1-209ENST00000486045 VSIG10Q8N0Z9 540 aa24.66■■□□□ 1.54
RHBDF1-209ENST00000486045 TOMM70O94826 608 aa24.65■■□□□ 1.54
RHBDF1-209ENST00000486045 CANXP27824 592 aaKnown RBP24.65■■□□□ 1.54
RHBDF1-209ENST00000486045 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.54
RHBDF1-209ENST00000486045 RNF181Q9P0P0 153 aa24.64■■□□□ 1.54
RHBDF1-209ENST00000486045 TTC5Q8N0Z6 440 aa24.63■■□□□ 1.53
RHBDF1-209ENST00000486045 IL17REQ8NFR9 667 aa24.63■■□□□ 1.53
RHBDF1-209ENST00000486045 ARFGEF1Q9Y6D6 1849 aa24.63■■□□□ 1.53
RHBDF1-209ENST00000486045 NPC1L1Q9UHC9 1359 aa24.62■■□□□ 1.53
RHBDF1-209ENST00000486045 SERPINB2P05120 415 aa24.61■■□□□ 1.53
RHBDF1-209ENST00000486045 ZNF496Q96IT1 587 aaPredicted RBP24.61■■□□□ 1.53
RHBDF1-209ENST00000486045 RASSF7Q02833 373 aa24.6■■□□□ 1.53
RHBDF1-209ENST00000486045 CARMIL3Q8ND23 1372 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 GNAT3A8MTJ3 354 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 STARD3NLO95772 234 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 APLP1P51693 650 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 EIF5P55010 431 aaKnown RBP24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 TEFQ10587 303 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 IFFO2Q5TF58 517 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 BICDL1Q6ZP65 573 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 GAS2L2Q8NHY3 880 aa24.59■■□□□ 1.53
RHBDF1-209ENST00000486045 UBR2Q8IWV8 1755 aa24.58■■□□□ 1.53
RHBDF1-209ENST00000486045 ZNF790Q6PG37 636 aa24.58■■□□□ 1.53
RHBDF1-209ENST00000486045 HEG1Q9ULI3 1381 aa24.57■■□□□ 1.52
RHBDF1-209ENST00000486045 VIRMAQ69YN4 1812 aaKnown RBP24.57■■□□□ 1.52
RHBDF1-209ENST00000486045 NRXN2Q9P2S2 1712 aa24.56■■□□□ 1.52
RHBDF1-209ENST00000486045 C2CD5Q86YS7 1000 aa24.56■■□□□ 1.52
RHBDF1-209ENST00000486045 RBM46Q8TBY0 533 aaKnown RBP24.56■■□□□ 1.52
RHBDF1-209ENST00000486045 ZNF330Q9Y3S2 320 aaPredicted RBP24.56■■□□□ 1.52
RHBDF1-209ENST00000486045 KDM2BQ8NHM5 1336 aa24.56■■□□□ 1.52
RHBDF1-209ENST00000486045 TBC1D9BQ66K14 1250 aa24.55■■□□□ 1.52
RHBDF1-209ENST00000486045 C16orf71Q8IYS4 520 aaPredicted RBP24.55■■□□□ 1.52
RHBDF1-209ENST00000486045 PHACTR3Q96KR7 559 aa24.55■■□□□ 1.52
RHBDF1-209ENST00000486045 RRAGCQ9HB90 399 aa24.55■■□□□ 1.52
RHBDF1-209ENST00000486045 AFDNP55196 1824 aaKnown RBP24.55■■□□□ 1.52
RHBDF1-209ENST00000486045 A0A087WZG4 1122 aa24.54■■□□□ 1.52
RHBDF1-209ENST00000486045 PRELPP51888 382 aa24.54■■□□□ 1.52
RHBDF1-209ENST00000486045 TBC1D2BQ9UPU7 963 aa24.54■■□□□ 1.52
RHBDF1-209ENST00000486045 KCNQ3O43525 872 aa24.53■■□□□ 1.52
RHBDF1-209ENST00000486045 PRKAR2BP31323 418 aa24.53■■□□□ 1.52
RHBDF1-209ENST00000486045 DNAJC5GQ8N7S2 189 aa24.53■■□□□ 1.52
RHBDF1-209ENST00000486045 TTLL6Q8N841 843 aa24.53■■□□□ 1.52
RHBDF1-209ENST00000486045 A1BGP04217 495 aa24.52■■□□□ 1.52
RHBDF1-209ENST00000486045 CCDC24Q8N4L8 307 aa24.52■■□□□ 1.52
RHBDF1-209ENST00000486045 RSPH6AQ9H0K4 717 aa24.52■■□□□ 1.52
RHBDF1-209ENST00000486045 CEMIPQ8WUJ3 1361 aa24.52■■□□□ 1.52
RHBDF1-209ENST00000486045 H0YIN7 160 aa24.51■■□□□ 1.51
RHBDF1-209ENST00000486045 HTRA3P83110 453 aa24.51■■□□□ 1.51
RHBDF1-209ENST00000486045 FMNL2Q96PY5 1086 aa24.51■■□□□ 1.51
RHBDF1-209ENST00000486045 TEX13AQ9BXU3 409 aaPredicted RBP24.51■■□□□ 1.51
RHBDF1-209ENST00000486045 LMNB1P20700 586 aa24.49■■□□□ 1.51
RHBDF1-209ENST00000486045 IL6STP40189 918 aaPredicted RBP24.49■■□□□ 1.51
RHBDF1-209ENST00000486045 CFAP53Q96M91 514 aa24.49■■□□□ 1.51
RHBDF1-209ENST00000486045 BTBD11A6QL63 1104 aa24.48■■□□□ 1.51
RHBDF1-209ENST00000486045 NFKBIEO00221 500 aa24.48■■□□□ 1.51
RHBDF1-209ENST00000486045 PRR5LQ6MZQ0 368 aa24.48■■□□□ 1.51
RHBDF1-209ENST00000486045 SIPA1L3O60292 1781 aaPredicted RBP24.47■■□□□ 1.51
RHBDF1-209ENST00000486045 FSTL1Q12841 308 aa24.47■■□□□ 1.51
RHBDF1-209ENST00000486045 ZNF622Q969S3 477 aaKnown RBP eCLIP24.47■■□□□ 1.511e-7■■■■■ 29.8
RHBDF1-209ENST00000486045 SCN7AQ01118 1682 aa24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 ZC3H4Q9UPT8 1303 aaKnown RBP24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 CAMTA2O94983 1202 aa24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 PIP4K2AP48426 406 aaPredicted RBP24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 BRIP1Q9BX63 1249 aa24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 ZNF219Q9P2Y4 722 aaPredicted RBP24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 SBF1O95248 1867 aa24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 DLEC1Q9Y238 1755 aa24.46■■□□□ 1.51
RHBDF1-209ENST00000486045 PRAMEF22A3QJZ6 481 aa24.45■■□□□ 1.5
RHBDF1-209ENST00000486045 USP16Q9Y5T5 823 aa24.45■■□□□ 1.5
RHBDF1-209ENST00000486045 U2AF1L5P0DN76 240 aaPredicted RBP24.44■■□□□ 1.5
RHBDF1-209ENST00000486045 U2AF1Q01081 240 aaKnown RBP eCLIP24.44■■□□□ 1.5
RHBDF1-209ENST00000486045 MCM10Q7L590 875 aa24.44■■□□□ 1.5
RHBDF1-209ENST00000486045 GLTPD2A6NH11 291 aa24.43■■□□□ 1.5
RHBDF1-209ENST00000486045 C21orf2O43822 256 aa24.43■■□□□ 1.5
RHBDF1-209ENST00000486045 PPP2R1AP30153 589 aa24.43■■□□□ 1.5
RHBDF1-209ENST00000486045 PDE6BP35913 854 aa24.43■■□□□ 1.5
RHBDF1-209ENST00000486045 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
RHBDF1-209ENST00000486045 NUDCQ9Y266 331 aa24.43■■□□□ 1.5
RHBDF1-209ENST00000486045 TNRC6CQ9HCJ0 1690 aaKnown RBP24.43■■□□□ 1.5
RHBDF1-209ENST00000486045 WDR90Q96KV7 1748 aa24.42■■□□□ 1.5
RHBDF1-209ENST00000486045 DZIP3Q86Y13 1208 aaKnown RBP24.42■■□□□ 1.5
RHBDF1-209ENST00000486045 SETDB2Q96T68 719 aa24.42■■□□□ 1.5
RHBDF1-209ENST00000486045 ANKRD31Q8N7Z5 1873 aa24.41■■□□□ 1.5
RHBDF1-209ENST00000486045 DCTN1Q14203 1278 aa24.41■■□□□ 1.5
RHBDF1-209ENST00000486045 CNBD1Q8NA66 436 aa24.41■■□□□ 1.5
RHBDF1-209ENST00000486045 SMC1BQ8NDV3 1235 aa24.41■■□□□ 1.5
RHBDF1-209ENST00000486045 KLRG1Q96E93 195 aa24.4■■□□□ 1.5
RHBDF1-209ENST00000486045 PDZRN3Q9UPQ7 1066 aa24.4■■□□□ 1.5
RHBDF1-209ENST00000486045 COL11A2P13942 1736 aaPredicted RBP24.39■■□□□ 1.5
RHBDF1-209ENST00000486045 NPHP1O15259 732 aa24.39■■□□□ 1.49
RHBDF1-209ENST00000486045 VEGFAP15692 232 aaPredicted RBP24.39■■□□□ 1.49
RHBDF1-209ENST00000486045 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.49
RHBDF1-209ENST00000486045 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
RHBDF1-209ENST00000486045 ST5P78524 1137 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms