RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
TTC3-219ENST00000485402 TPM2P07951 284 aa18.17■□□□□ 0.5
TTC3-219ENST00000485402 GSPT1P15170 499 aaKnown RBP18.17■□□□□ 0.5
TTC3-219ENST00000485402 AKAP4Q5JQC9 854 aa18.17■□□□□ 0.5
TTC3-219ENST00000485402 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
TTC3-219ENST00000485402 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
TTC3-219ENST00000485402 RBSNQ9H1K0 784 aa18.17■□□□□ 0.5
TTC3-219ENST00000485402 CPDO75976 1380 aa18.17■□□□□ 0.5
TTC3-219ENST00000485402 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
TTC3-219ENST00000485402 ADAMTS2O95450 1211 aa18.15■□□□□ 0.5
TTC3-219ENST00000485402 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
TTC3-219ENST00000485402 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
TTC3-219ENST00000485402 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
TTC3-219ENST00000485402 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
TTC3-219ENST00000485402 CHMP4BQ9H444 224 aaKnown RBP18.14■□□□□ 0.49
TTC3-219ENST00000485402 BTG4Q9NY30 223 aa18.14■□□□□ 0.49
TTC3-219ENST00000485402 ROBO1Q9Y6N7 1651 aa18.14■□□□□ 0.49
TTC3-219ENST00000485402 NUCB2P80303 420 aa18.14■□□□□ 0.49
TTC3-219ENST00000485402 PLEKHM2Q8IWE5 1019 aa18.14■□□□□ 0.49
TTC3-219ENST00000485402 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
TTC3-219ENST00000485402 RABEP1Q15276 862 aa18.13■□□□□ 0.49
TTC3-219ENST00000485402 SYCE3A1L190 88 aa18.13■□□□□ 0.49
TTC3-219ENST00000485402 PTMAP06454 111 aaKnown RBP18.13■□□□□ 0.49
TTC3-219ENST00000485402 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
TTC3-219ENST00000485402 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
TTC3-219ENST00000485402 PPP1R9BQ96SB3 815 aa18.12■□□□□ 0.49
TTC3-219ENST00000485402 WDR17Q8IZU2 1322 aa18.12■□□□□ 0.49
TTC3-219ENST00000485402 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
TTC3-219ENST00000485402 CAMTA1Q9Y6Y1 1673 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 LMBRD1Q9NUN5 540 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 AK9Q5TCS8 1911 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 KCNQ3O43525 872 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.11■□□□□ 0.49
TTC3-219ENST00000485402 ST18O60284 1047 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 OFD1O75665 1012 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 PDCL3Q9H2J4 239 aa18.11■□□□□ 0.49
TTC3-219ENST00000485402 CASC1Q6TDU7 716 aa18.1■□□□□ 0.49
TTC3-219ENST00000485402 NHSL1Q5SYE7 1610 aa18.1■□□□□ 0.49
TTC3-219ENST00000485402 EIF2S2P20042 333 aaKnown RBP18.1■□□□□ 0.49
TTC3-219ENST00000485402 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
TTC3-219ENST00000485402 COL18A1P39060 1754 aa18.09■□□□□ 0.49
TTC3-219ENST00000485402 MEGF6O75095 1541 aa18.09■□□□□ 0.49
TTC3-219ENST00000485402 DNTTIP2Q5QJE6 756 aaKnown RBP18.09■□□□□ 0.49
TTC3-219ENST00000485402 TSHZ3Q63HK5 1081 aa18.09■□□□□ 0.49
TTC3-219ENST00000485402 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
TTC3-219ENST00000485402 SDSP20132 328 aa18.09■□□□□ 0.49
TTC3-219ENST00000485402 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
TTC3-219ENST00000485402 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
TTC3-219ENST00000485402 NSFL1CQ9UNZ2 370 aaKnown RBP18.09■□□□□ 0.49
TTC3-219ENST00000485402 NEK4P51957 841 aa18.08■□□□□ 0.49
TTC3-219ENST00000485402 TTC22Q5TAA0 569 aa18.08■□□□□ 0.49
TTC3-219ENST00000485402 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.49
TTC3-219ENST00000485402 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.48
TTC3-219ENST00000485402 PHKG2P15735 406 aa18.08■□□□□ 0.48
TTC3-219ENST00000485402 GPT2Q8TD30 523 aa18.08■□□□□ 0.48
TTC3-219ENST00000485402 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
TTC3-219ENST00000485402 CRYBG1Q9Y4K1 1723 aa18.07■□□□□ 0.48
TTC3-219ENST00000485402 UQCRHLA0A096LP55 91 aa18.07■□□□□ 0.48
TTC3-219ENST00000485402 CYP27B1O15528 508 aa18.07■□□□□ 0.48
TTC3-219ENST00000485402 UQCRHP07919 91 aa18.07■□□□□ 0.48
TTC3-219ENST00000485402 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
TTC3-219ENST00000485402 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
TTC3-219ENST00000485402 NFATC2IPQ8NCF5 419 aa18.06■□□□□ 0.48
TTC3-219ENST00000485402 COL5A2P05997 1499 aaPredicted RBP18.06■□□□□ 0.48
TTC3-219ENST00000485402 GDPD2Q9HCC8 539 aa18.06■□□□□ 0.48
TTC3-219ENST00000485402 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
TTC3-219ENST00000485402 PLCB2Q00722 1185 aa18.05■□□□□ 0.48
TTC3-219ENST00000485402 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
TTC3-219ENST00000485402 TMEM63CQ9P1W3 806 aa18.05■□□□□ 0.48
TTC3-219ENST00000485402 IL2RBP14784 551 aa18.05■□□□□ 0.48
TTC3-219ENST00000485402 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
TTC3-219ENST00000485402 ZNF445P59923 1031 aa18.05■□□□□ 0.48
TTC3-219ENST00000485402 G2E3Q7L622 706 aa18.04■□□□□ 0.48
TTC3-219ENST00000485402 HDGFL1Q5TGJ6 251 aa18.04■□□□□ 0.48
TTC3-219ENST00000485402 DCTPP1Q9H773 170 aa18.04■□□□□ 0.48
TTC3-219ENST00000485402 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
TTC3-219ENST00000485402 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
TTC3-219ENST00000485402 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
TTC3-219ENST00000485402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.04■□□□□ 0.482e-8■■■□□ 18.7
TTC3-219ENST00000485402 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
TTC3-219ENST00000485402 MEIS3Q99687 375 aa18.02■□□□□ 0.48
TTC3-219ENST00000485402 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.48
TTC3-219ENST00000485402 ZDHHC9Q9Y397 364 aa18.02■□□□□ 0.48
TTC3-219ENST00000485402 RILPL2Q969X0 211 aa18.02■□□□□ 0.48
TTC3-219ENST00000485402 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.48
TTC3-219ENST00000485402 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
TTC3-219ENST00000485402 F6X3S4 739 aa18.02■□□□□ 0.47
TTC3-219ENST00000485402 REC8O95072 547 aa18.01■□□□□ 0.47
TTC3-219ENST00000485402 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
TTC3-219ENST00000485402 CABP4P57796 275 aa18.01■□□□□ 0.47
TTC3-219ENST00000485402 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
TTC3-219ENST00000485402 ZNF830Q96NB3 372 aaPredicted RBP18.01■□□□□ 0.47
TTC3-219ENST00000485402 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
TTC3-219ENST00000485402 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
TTC3-219ENST00000485402 ABCC4O15439 1325 aa18.01■□□□□ 0.47
TTC3-219ENST00000485402 ANXA1P04083 346 aa18■□□□□ 0.47
TTC3-219ENST00000485402 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
TTC3-219ENST00000485402 PRAMEF22A3QJZ6 481 aa18■□□□□ 0.47
TTC3-219ENST00000485402 DTNBO60941 627 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms