RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CLUAP1Q96AJ1 413 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
LRIF1-202ENST00000485275 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
LRIF1-202ENST00000485275 ATF7IPQ6VMQ6 1270 aa18.62■□□□□ 0.57
LRIF1-202ENST00000485275 EXOC6Q8TAG9 804 aa18.62■□□□□ 0.57
LRIF1-202ENST00000485275 RXRBP28702 533 aa18.61■□□□□ 0.57
LRIF1-202ENST00000485275 PDIA6Q15084 440 aa18.61■□□□□ 0.57
LRIF1-202ENST00000485275 KRT27Q7Z3Y8 459 aa18.6■□□□□ 0.57
LRIF1-202ENST00000485275 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
LRIF1-202ENST00000485275 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
LRIF1-202ENST00000485275 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
LRIF1-202ENST00000485275 PDE3AQ14432 1141 aa18.59■□□□□ 0.57
LRIF1-202ENST00000485275 LRP10Q7Z4F1 713 aa18.59■□□□□ 0.57
LRIF1-202ENST00000485275 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
LRIF1-202ENST00000485275 LY75O60449 1722 aa18.59■□□□□ 0.57
LRIF1-202ENST00000485275 N4BP2Q86UW6 1770 aaPredicted RBP18.59■□□□□ 0.57
LRIF1-202ENST00000485275 COL5A3P25940 1745 aaPredicted RBP18.58■□□□□ 0.57
LRIF1-202ENST00000485275 ABCC4O15439 1325 aa18.58■□□□□ 0.56
LRIF1-202ENST00000485275 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.56
LRIF1-202ENST00000485275 FLIIQ13045 1269 aa18.58■□□□□ 0.56
LRIF1-202ENST00000485275 DNAJC10Q8IXB1 793 aa18.58■□□□□ 0.56
LRIF1-202ENST00000485275 ARHGAP45Q92619 1136 aa18.58■□□□□ 0.56
LRIF1-202ENST00000485275 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.56
LRIF1-202ENST00000485275 COG6Q9Y2V7 657 aa18.58■□□□□ 0.56
LRIF1-202ENST00000485275 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
LRIF1-202ENST00000485275 VSIG10Q8N0Z9 540 aa18.57■□□□□ 0.56
LRIF1-202ENST00000485275 DBF4Q9UBU7 674 aaPredicted RBP18.57■□□□□ 0.56
LRIF1-202ENST00000485275 NBPF26B4DH59 902 aa18.56■□□□□ 0.56
LRIF1-202ENST00000485275 NBPF14Q5TI25 921 aa18.56■□□□□ 0.56
LRIF1-202ENST00000485275 NBPF10Q6P3W6 841 aaKnown RBP18.56■□□□□ 0.56
LRIF1-202ENST00000485275 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
LRIF1-202ENST00000485275 NBPF15Q8N660 670 aa18.56■□□□□ 0.56
LRIF1-202ENST00000485275 PTPRCP08575 1304 aa18.56■□□□□ 0.56
LRIF1-202ENST00000485275 RREB1Q92766 1687 aa18.56■□□□□ 0.56
LRIF1-202ENST00000485275 DDX21Q9NR30 783 aaKnown RBP eCLIP18.55■□□□□ 0.56
LRIF1-202ENST00000485275 F6X3S4 739 aa18.55■□□□□ 0.56
LRIF1-202ENST00000485275 IPO8O15397 1037 aaKnown RBP18.55■□□□□ 0.56
LRIF1-202ENST00000485275 A1BGP04217 495 aa18.54■□□□□ 0.56
LRIF1-202ENST00000485275 ITPK1Q13572 414 aa18.54■□□□□ 0.56
LRIF1-202ENST00000485275 FTSJ3Q8IY81 847 aaKnown RBP18.54■□□□□ 0.56
LRIF1-202ENST00000485275 MYH14Q7Z406 1995 aaKnown RBP18.53■□□□□ 0.56
LRIF1-202ENST00000485275 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
LRIF1-202ENST00000485275 MYL6BP14649 208 aa18.53■□□□□ 0.56
LRIF1-202ENST00000485275 SIK1P57059 783 aa18.53■□□□□ 0.56
LRIF1-202ENST00000485275 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
LRIF1-202ENST00000485275 ADCY9O60503 1353 aa18.53■□□□□ 0.56
LRIF1-202ENST00000485275 FKBP5Q13451 457 aaPredicted RBP18.53■□□□□ 0.56
LRIF1-202ENST00000485275 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
LRIF1-202ENST00000485275 API5Q9BZZ5 524 aaKnown RBP18.53■□□□□ 0.56
LRIF1-202ENST00000485275 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.56
LRIF1-202ENST00000485275 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
LRIF1-202ENST00000485275 CYP19A1P11511 503 aaPredicted RBP18.52■□□□□ 0.55
LRIF1-202ENST00000485275 KCNQ4P56696 695 aa18.52■□□□□ 0.55
LRIF1-202ENST00000485275 ARFGEF2Q9Y6D5 1785 aa18.51■□□□□ 0.55
LRIF1-202ENST00000485275 TAF1LQ8IZX4 1826 aa18.51■□□□□ 0.55
LRIF1-202ENST00000485275 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
LRIF1-202ENST00000485275 TRIM37O94972 964 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
LRIF1-202ENST00000485275 HYPKQ9NX55 129 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 ATP6V1AP38606 617 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 ERICH6BQ5W0A0 696 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 ITPRIPQ8IWB1 547 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 CHMP4AQ9BY43 222 aa18.5■□□□□ 0.55
LRIF1-202ENST00000485275 XAGE3Q8WTP9 111 aa18.49■□□□□ 0.55
LRIF1-202ENST00000485275 ZBTB1Q9Y2K1 713 aa18.49■□□□□ 0.55
LRIF1-202ENST00000485275 INTS3Q68E01 1043 aaKnown RBP18.48■□□□□ 0.55
LRIF1-202ENST00000485275 PI4KAP2A4QPH2 592 aa18.47■□□□□ 0.55
LRIF1-202ENST00000485275 MS4A1P11836 297 aa18.47■□□□□ 0.55
LRIF1-202ENST00000485275 AIMP1Q12904 312 aaKnown RBP18.47■□□□□ 0.55
LRIF1-202ENST00000485275 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
LRIF1-202ENST00000485275 PI4KAP1Q8N8J0 262 aa18.47■□□□□ 0.55
LRIF1-202ENST00000485275 LINC00116Q8NCU8 138 aa18.47■□□□□ 0.55
LRIF1-202ENST00000485275 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
LRIF1-202ENST00000485275 STARD3NLO95772 234 aa18.46■□□□□ 0.55
LRIF1-202ENST00000485275 INTS5Q6P9B9 1019 aaKnown RBP18.46■□□□□ 0.55
LRIF1-202ENST00000485275 SLC4A10Q6U841 1118 aa18.46■□□□□ 0.55
LRIF1-202ENST00000485275 TTLL7Q6ZT98 887 aa18.46■□□□□ 0.55
LRIF1-202ENST00000485275 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
LRIF1-202ENST00000485275 B4GALNT3Q6L9W6 998 aa18.45■□□□□ 0.54
LRIF1-202ENST00000485275 PPP4R2Q9NY27 417 aa18.45■□□□□ 0.54
LRIF1-202ENST00000485275 MAP3K2Q9Y2U5 619 aa18.45■□□□□ 0.54
LRIF1-202ENST00000485275 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
LRIF1-202ENST00000485275 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
LRIF1-202ENST00000485275 C4BP0C0L5 1744 aa18.44■□□□□ 0.54
LRIF1-202ENST00000485275 KSR2Q6VAB6 950 aa18.44■□□□□ 0.54
LRIF1-202ENST00000485275 DNAAF4Q8WXU2 420 aa18.44■□□□□ 0.54
LRIF1-202ENST00000485275 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
LRIF1-202ENST00000485275 DDX19BQ9UMR2 479 aa18.44■□□□□ 0.54
LRIF1-202ENST00000485275 ZBTB40Q9NUA8 1239 aa18.43■□□□□ 0.54
LRIF1-202ENST00000485275 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
LRIF1-202ENST00000485275 BEND3Q5T5X7 828 aa18.42■□□□□ 0.54
LRIF1-202ENST00000485275 CCDC87Q9NVE4 849 aa18.42■□□□□ 0.54
LRIF1-202ENST00000485275 MEIS3Q99687 375 aa18.42■□□□□ 0.54
LRIF1-202ENST00000485275 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
LRIF1-202ENST00000485275 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
LRIF1-202ENST00000485275 CCT4P50991 539 aaKnown RBP18.41■□□□□ 0.54
LRIF1-202ENST00000485275 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
LRIF1-202ENST00000485275 RGPD3A6NKT7 1758 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms