RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ATF5Q9Y2D1 282 aaPredicted RBP23.31■■□□□ 1.32
SREBF1-213ENST00000485080 CCDC27Q2M243 656 aa23.3■■□□□ 1.32
SREBF1-213ENST00000485080 SOS1Q07889 1333 aaPredicted RBP23.3■■□□□ 1.32
SREBF1-213ENST00000485080 CHL1O00533 1208 aa23.29■■□□□ 1.32
SREBF1-213ENST00000485080 PHF14O94880 888 aa23.29■■□□□ 1.32
SREBF1-213ENST00000485080 EIF4A1P60842 406 aaKnown RBP23.29■■□□□ 1.32
SREBF1-213ENST00000485080 ARHGEF1Q92888 912 aaKnown RBP23.29■■□□□ 1.32
SREBF1-213ENST00000485080 MSH5O43196 834 aa23.28■■□□□ 1.32
SREBF1-213ENST00000485080 CALD1Q05682 793 aaKnown RBP23.28■■□□□ 1.32
SREBF1-213ENST00000485080 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
SREBF1-213ENST00000485080 DIEXFQ68CQ4 756 aaKnown RBP23.27■■□□□ 1.32
SREBF1-213ENST00000485080 SMIM5Q71RC9 77 aa23.27■■□□□ 1.32
SREBF1-213ENST00000485080 ZBTB1Q9Y2K1 713 aa23.27■■□□□ 1.32
SREBF1-213ENST00000485080 GIGYF1O75420 1035 aaPredicted RBP23.26■■□□□ 1.31
SREBF1-213ENST00000485080 CFAP44Q96MT7 982 aa23.26■■□□□ 1.31
SREBF1-213ENST00000485080 ZNF853P0CG23 659 aa23.25■■□□□ 1.31
SREBF1-213ENST00000485080 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
SREBF1-213ENST00000485080 NGEFQ8N5V2 710 aa23.25■■□□□ 1.31
SREBF1-213ENST00000485080 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
SREBF1-213ENST00000485080 POLD1P28340 1107 aa23.24■■□□□ 1.31
SREBF1-213ENST00000485080 RFC4P35249 363 aa23.24■■□□□ 1.31
SREBF1-213ENST00000485080 IL6STP40189 918 aaPredicted RBP23.24■■□□□ 1.31
SREBF1-213ENST00000485080 FAM9BQ8IZU0 186 aa23.23■■□□□ 1.31
SREBF1-213ENST00000485080 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
SREBF1-213ENST00000485080 C4AP0C0L4 1744 aa23.22■■□□□ 1.31
SREBF1-213ENST00000485080 PRAMEF22A3QJZ6 481 aa23.22■■□□□ 1.31
SREBF1-213ENST00000485080 NLGN1Q8N2Q7 840 aa23.22■■□□□ 1.31
SREBF1-213ENST00000485080 ARXQ96QS3 562 aa23.22■■□□□ 1.31
SREBF1-213ENST00000485080 PPP1R1BQ9UD71 204 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-213ENST00000485080 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
SREBF1-213ENST00000485080 COL15A1P39059 1388 aa23.22■■□□□ 1.31
SREBF1-213ENST00000485080 A0A087WZG4 1122 aa23.21■■□□□ 1.31
SREBF1-213ENST00000485080 A1BGP04217 495 aa23.21■■□□□ 1.31
SREBF1-213ENST00000485080 GYS1P13807 737 aa23.21■■□□□ 1.31
SREBF1-213ENST00000485080 WWC1Q8IX03 1113 aa23.21■■□□□ 1.31
SREBF1-213ENST00000485080 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
SREBF1-213ENST00000485080 GNAI1P63096 354 aa23.2■■□□□ 1.3
SREBF1-213ENST00000485080 NARFQ9UHQ1 456 aa23.2■■□□□ 1.3
SREBF1-213ENST00000485080 LAMB4A4D0S4 1761 aa23.19■■□□□ 1.3
SREBF1-213ENST00000485080 IL16Q14005 1332 aa23.19■■□□□ 1.3
SREBF1-213ENST00000485080 MSL1Q68DK7 614 aa23.19■■□□□ 1.3
SREBF1-213ENST00000485080 ERBB4Q15303 1308 aa23.18■■□□□ 1.3
SREBF1-213ENST00000485080 NBPF26B4DH59 902 aa23.17■■□□□ 1.3
SREBF1-213ENST00000485080 ZPR1O75312 459 aa23.17■■□□□ 1.3
SREBF1-213ENST00000485080 HOXB7P09629 217 aa23.17■■□□□ 1.3
SREBF1-213ENST00000485080 NBPF10Q6P3W6 841 aaKnown RBP23.17■■□□□ 1.3
SREBF1-213ENST00000485080 NBPF15Q8N660 670 aa23.17■■□□□ 1.3
SREBF1-213ENST00000485080 MBIPQ9NS73 344 aa23.16■■□□□ 1.3
SREBF1-213ENST00000485080 SRP68Q9UHB9 627 aaKnown RBP23.16■■□□□ 1.3
SREBF1-213ENST00000485080 LAS1LQ9Y4W2 734 aaKnown RBP23.16■■□□□ 1.3
SREBF1-213ENST00000485080 RGL2O15211 777 aa23.15■■□□□ 1.3
SREBF1-213ENST00000485080 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
SREBF1-213ENST00000485080 MMP10P09238 476 aa23.13■■□□□ 1.29
SREBF1-213ENST00000485080 FKBP8Q14318 412 aa23.13■■□□□ 1.29
SREBF1-213ENST00000485080 USPL1Q5W0Q7 1092 aa23.13■■□□□ 1.29
SREBF1-213ENST00000485080 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
SREBF1-213ENST00000485080 MIER1Q8N108 512 aa23.13■■□□□ 1.29
SREBF1-213ENST00000485080 FHDC1Q9C0D6 1143 aaPredicted RBP23.13■■□□□ 1.29
SREBF1-213ENST00000485080 TM4SF1P30408 202 aa23.12■■□□□ 1.29
SREBF1-213ENST00000485080 SYT17Q9BSW7 474 aa23.12■■□□□ 1.29
SREBF1-213ENST00000485080 BCL2L12Q9HB09 334 aa23.12■■□□□ 1.29
SREBF1-213ENST00000485080 CD2APQ9Y5K6 639 aa23.11■■□□□ 1.29
SREBF1-213ENST00000485080 CAMTA2O94983 1202 aa23.1■■□□□ 1.29
SREBF1-213ENST00000485080 PIP4K2AP48426 406 aaPredicted RBP23.09■■□□□ 1.29
SREBF1-213ENST00000485080 PDIA6Q15084 440 aa23.09■■□□□ 1.29
SREBF1-213ENST00000485080 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
SREBF1-213ENST00000485080 CLEC4GQ6UXB4 293 aa23.09■■□□□ 1.29
SREBF1-213ENST00000485080 LRP10Q7Z4F1 713 aa23.09■■□□□ 1.29
SREBF1-213ENST00000485080 DZIP3Q86Y13 1208 aaKnown RBP23.09■■□□□ 1.29
SREBF1-213ENST00000485080 TBC1D2BQ9UPU7 963 aa23.09■■□□□ 1.29
SREBF1-213ENST00000485080 ZNF521Q96K83 1311 aa23.08■■□□□ 1.29
SREBF1-213ENST00000485080 SCN7AQ01118 1682 aa23.08■■□□□ 1.29
SREBF1-213ENST00000485080 DUSP27Q5VZP5 1158 aa23.07■■□□□ 1.28
SREBF1-213ENST00000485080 CHMP4AQ9BY43 222 aa23.07■■□□□ 1.28
SREBF1-213ENST00000485080 ZNF330Q9Y3S2 320 aaPredicted RBP23.07■■□□□ 1.28
SREBF1-213ENST00000485080 PARP3Q9Y6F1 533 aa23.07■■□□□ 1.28
SREBF1-213ENST00000485080 GOLGB1Q14789 3259 aaKnown RBP23.06■■□□□ 1.28
SREBF1-213ENST00000485080 EIF2S2P20042 333 aaKnown RBP23.06■■□□□ 1.28
SREBF1-213ENST00000485080 DDR1Q08345 913 aa23.06■■□□□ 1.28
SREBF1-213ENST00000485080 NFIXQ14938 502 aa23.06■■□□□ 1.28
SREBF1-213ENST00000485080 BCORQ6W2J9 1755 aa23.05■■□□□ 1.28
SREBF1-213ENST00000485080 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
SREBF1-213ENST00000485080 ERVV-1B6SEH8 477 aa23.05■■□□□ 1.28
SREBF1-213ENST00000485080 POLRMTO00411 1230 aaKnown RBP23.05■■□□□ 1.28
SREBF1-213ENST00000485080 DDX21Q9NR30 783 aaKnown RBP eCLIP23.05■■□□□ 1.28
SREBF1-213ENST00000485080 UTRNP46939 3433 aa23.04■■□□□ 1.28
SREBF1-213ENST00000485080 HDGFL1Q5TGJ6 251 aa23.04■■□□□ 1.28
SREBF1-213ENST00000485080 C8orf58Q8NAV2 365 aa23.04■■□□□ 1.28
SREBF1-213ENST00000485080 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
SREBF1-213ENST00000485080 ZNF652Q9Y2D9 606 aa23.03■■□□□ 1.28
SREBF1-213ENST00000485080 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
SREBF1-213ENST00000485080 C10orf71Q711Q0 1435 aa23.02■■□□□ 1.28
SREBF1-213ENST00000485080 MYL6BP14649 208 aa23.02■■□□□ 1.28
SREBF1-213ENST00000485080 TSR2Q969E8 191 aaKnown RBP23.02■■□□□ 1.28
SREBF1-213ENST00000485080 DBF4Q9UBU7 674 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-213ENST00000485080 MAP3K15Q6ZN16 1313 aa23.02■■□□□ 1.28
SREBF1-213ENST00000485080 PROSER3Q2NL68 480 aa23.01■■□□□ 1.27
SREBF1-213ENST00000485080 TBC1D9BQ66K14 1250 aa23.01■■□□□ 1.27
SREBF1-213ENST00000485080 NRXN2Q9P2S2 1712 aa23.01■■□□□ 1.27
SREBF1-213ENST00000485080 FANCIQ9NVI1 1328 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms