RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 POLA2Q14181 598 aa17.52■□□□□ 0.4
ABCD4-212ENST00000484380 C5P01031 1676 aa17.52■□□□□ 0.39
ABCD4-212ENST00000484380 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.39
ABCD4-212ENST00000484380 APBB1O00213 710 aa17.51■□□□□ 0.39
ABCD4-212ENST00000484380 USP26Q9BXU7 913 aa17.51■□□□□ 0.39
ABCD4-212ENST00000484380 STAP2Q9UGK3 403 aa17.51■□□□□ 0.39
ABCD4-212ENST00000484380 CIZ1Q9ULV3 898 aaPredicted RBP17.51■□□□□ 0.39
ABCD4-212ENST00000484380 MEGF6O75095 1541 aa17.51■□□□□ 0.39
ABCD4-212ENST00000484380 RAB11FIP3O75154 756 aa17.5■□□□□ 0.39
ABCD4-212ENST00000484380 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
ABCD4-212ENST00000484380 RABEP1Q15276 862 aa17.5■□□□□ 0.39
ABCD4-212ENST00000484380 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
ABCD4-212ENST00000484380 REC8O95072 547 aa17.49■□□□□ 0.39
ABCD4-212ENST00000484380 MX1P20591 662 aa17.49■□□□□ 0.39
ABCD4-212ENST00000484380 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
ABCD4-212ENST00000484380 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
ABCD4-212ENST00000484380 SPATA31A3Q5VYP0 1347 aa17.49■□□□□ 0.39
ABCD4-212ENST00000484380 K7ELQ4 463 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-212ENST00000484380 ALDH1L1O75891 902 aa17.49■□□□□ 0.39
ABCD4-212ENST00000484380 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
ABCD4-212ENST00000484380 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
ABCD4-212ENST00000484380 ERC2O15083 957 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 MTX1Q13505 466 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 PHKG2P15735 406 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 SPRYD3Q8NCJ5 442 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
ABCD4-212ENST00000484380 LAMB4A4D0S4 1761 aa17.46■□□□□ 0.39
ABCD4-212ENST00000484380 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
ABCD4-212ENST00000484380 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
ABCD4-212ENST00000484380 AK9Q5TCS8 1911 aa17.46■□□□□ 0.39
ABCD4-212ENST00000484380 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
ABCD4-212ENST00000484380 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
ABCD4-212ENST00000484380 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
ABCD4-212ENST00000484380 MCM4P33991 863 aa17.45■□□□□ 0.38
ABCD4-212ENST00000484380 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
ABCD4-212ENST00000484380 DDX21Q9NR30 783 aaKnown RBP eCLIP17.45■□□□□ 0.38
ABCD4-212ENST00000484380 HDAC5Q9UQL6 1122 aa17.45■□□□□ 0.38
ABCD4-212ENST00000484380 ABCA3Q99758 1704 aa17.45■□□□□ 0.38
ABCD4-212ENST00000484380 HSP90AB4PQ58FF6 505 aa17.44■□□□□ 0.38
ABCD4-212ENST00000484380 GLI3P10071 1580 aa17.44■□□□□ 0.38
ABCD4-212ENST00000484380 ANXA1P04083 346 aa17.44■□□□□ 0.38
ABCD4-212ENST00000484380 PROSER3Q2NL68 480 aa17.44■□□□□ 0.38
ABCD4-212ENST00000484380 ZNF790Q6PG37 636 aa17.44■□□□□ 0.38
ABCD4-212ENST00000484380 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
ABCD4-212ENST00000484380 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
ABCD4-212ENST00000484380 UTYO14607 1347 aa17.43■□□□□ 0.38
ABCD4-212ENST00000484380 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
ABCD4-212ENST00000484380 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
ABCD4-212ENST00000484380 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
ABCD4-212ENST00000484380 MAP3K2Q9Y2U5 619 aa17.43■□□□□ 0.38
ABCD4-212ENST00000484380 EPB41L2O43491 1005 aaKnown RBP17.42■□□□□ 0.38
ABCD4-212ENST00000484380 DDX58O95786 925 aaKnown RBP17.42■□□□□ 0.38
ABCD4-212ENST00000484380 RHPN1Q8TCX5 695 aa17.42■□□□□ 0.38
ABCD4-212ENST00000484380 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
ABCD4-212ENST00000484380 USP42Q9H9J4 1324 aaKnown RBP17.42■□□□□ 0.38
ABCD4-212ENST00000484380 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
ABCD4-212ENST00000484380 PDIA6Q15084 440 aa17.42■□□□□ 0.38
ABCD4-212ENST00000484380 ESYT1Q9BSJ8 1104 aa17.42■□□□□ 0.38
ABCD4-212ENST00000484380 RAB3GAP1Q15042 981 aa17.41■□□□□ 0.38
ABCD4-212ENST00000484380 LINS1Q8NG48 757 aa17.41■□□□□ 0.38
ABCD4-212ENST00000484380 IL17RAQ96F46 866 aa17.41■□□□□ 0.38
ABCD4-212ENST00000484380 DCAF5Q96JK2 942 aa17.41■□□□□ 0.38
ABCD4-212ENST00000484380 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
ABCD4-212ENST00000484380 DDX11L8A8MPP1 907 aa17.4■□□□□ 0.38
ABCD4-212ENST00000484380 CHMLP26374 656 aa17.4■□□□□ 0.38
ABCD4-212ENST00000484380 BRINP3Q76B58 766 aa17.4■□□□□ 0.38
ABCD4-212ENST00000484380 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
ABCD4-212ENST00000484380 TSHZ3Q63HK5 1081 aa17.4■□□□□ 0.38
ABCD4-212ENST00000484380 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
ABCD4-212ENST00000484380 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
ABCD4-212ENST00000484380 PAPPAQ13219 1627 aa17.39■□□□□ 0.37
ABCD4-212ENST00000484380 ST18O60284 1047 aa17.38■□□□□ 0.37
ABCD4-212ENST00000484380 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
ABCD4-212ENST00000484380 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
ABCD4-212ENST00000484380 CYP27B1O15528 508 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
ABCD4-212ENST00000484380 ANAPC15P60006 121 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 CHRNA2Q15822 529 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 IL27Q8NEV9 243 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 C9orf78Q9NZ63 289 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-212ENST00000484380 ARFGEF2Q9Y6D5 1785 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 NHSL1Q5SYE7 1610 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 GRM8O00222 908 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 ERC1Q8IUD2 1116 aa17.37■□□□□ 0.37
ABCD4-212ENST00000484380 COL5A2P05997 1499 aaPredicted RBP17.36■□□□□ 0.37
ABCD4-212ENST00000484380 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
ABCD4-212ENST00000484380 SLC39A6Q13433 755 aa17.36■□□□□ 0.37
ABCD4-212ENST00000484380 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
ABCD4-212ENST00000484380 CLEC17AQ6ZS10 378 aa17.36■□□□□ 0.37
ABCD4-212ENST00000484380 NFATC2IPQ8NCF5 419 aa17.36■□□□□ 0.37
ABCD4-212ENST00000484380 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
ABCD4-212ENST00000484380 SHANK3Q9BYB0 1731 aa17.36■□□□□ 0.37
ABCD4-212ENST00000484380 WDR17Q8IZU2 1322 aa17.36■□□□□ 0.37
ABCD4-212ENST00000484380 PTMSP20962 102 aa17.35■□□□□ 0.37
ABCD4-212ENST00000484380 MCCP23508 829 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms