RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-208ENST00000483868 RGPD3A6NKT7 1758 aaPredicted RBP35.61■■■■□ 3.29
TPRA1-208ENST00000483868 RGPD4Q7Z3J3 1758 aa35.61■■■■□ 3.29
TPRA1-208ENST00000483868 TAF1LQ8IZX4 1826 aa35.6■■■■□ 3.29
TPRA1-208ENST00000483868 TEX13AQ9BXU3 409 aaPredicted RBP35.6■■■■□ 3.29
TPRA1-208ENST00000483868 COL5A3P25940 1745 aaPredicted RBP35.6■■■■□ 3.29
TPRA1-208ENST00000483868 MYH14Q7Z406 1995 aaKnown RBP35.59■■■■□ 3.29
TPRA1-208ENST00000483868 SOS1Q07889 1333 aaPredicted RBP35.59■■■■□ 3.29
TPRA1-208ENST00000483868 STARD3NLO95772 234 aa35.58■■■■□ 3.29
TPRA1-208ENST00000483868 ANXA1P04083 346 aa35.58■■■■□ 3.29
TPRA1-208ENST00000483868 CT47B1P0C2W7 299 aaPredicted RBP35.57■■■■□ 3.29
TPRA1-208ENST00000483868 CRKLP46109 303 aaKnown RBP35.57■■■■□ 3.29
TPRA1-208ENST00000483868 PROSER3Q2NL68 480 aa35.57■■■■□ 3.29
TPRA1-208ENST00000483868 BCL2L13Q9BXK5 485 aa35.57■■■■□ 3.29
TPRA1-208ENST00000483868 PDIA6Q15084 440 aa35.57■■■■□ 3.28
TPRA1-208ENST00000483868 INTS5Q6P9B9 1019 aaKnown RBP35.57■■■■□ 3.28
TPRA1-208ENST00000483868 CHPF2Q9P2E5 772 aa35.57■■■■□ 3.28
TPRA1-208ENST00000483868 NBPF26B4DH59 902 aa35.56■■■■□ 3.28
TPRA1-208ENST00000483868 RARSP54136 660 aaKnown RBP35.56■■■■□ 3.28
TPRA1-208ENST00000483868 NBPF14Q5TI25 921 aa35.56■■■■□ 3.28
TPRA1-208ENST00000483868 NBPF10Q6P3W6 841 aaKnown RBP35.56■■■■□ 3.28
TPRA1-208ENST00000483868 NBPF15Q8N660 670 aa35.56■■■■□ 3.28
TPRA1-208ENST00000483868 SSH1Q8WYL5 1049 aa35.56■■■■□ 3.28
TPRA1-208ENST00000483868 ZBTB1Q9Y2K1 713 aa35.55■■■■□ 3.28
TPRA1-208ENST00000483868 CCDC30Q5VVM6 783 aa35.54■■■■□ 3.28
TPRA1-208ENST00000483868 SMIM5Q71RC9 77 aa35.52■■■■□ 3.28
TPRA1-208ENST00000483868 CCDC87Q9NVE4 849 aa35.52■■■■□ 3.28
TPRA1-208ENST00000483868 C4BP0C0L5 1744 aa35.52■■■■□ 3.28
TPRA1-208ENST00000483868 CANXP27824 592 aaKnown RBP35.52■■■■□ 3.28
TPRA1-208ENST00000483868 BCAR3O75815 825 aa35.51■■■■□ 3.27
TPRA1-208ENST00000483868 MYL6BP14649 208 aa35.51■■■■□ 3.27
TPRA1-208ENST00000483868 AMIGO3Q86WK7 504 aa35.51■■■■□ 3.27
TPRA1-208ENST00000483868 RREB1Q92766 1687 aa35.51■■■■□ 3.27
TPRA1-208ENST00000483868 RCAN3Q9UKA8 241 aa35.5■■■■□ 3.27
TPRA1-208ENST00000483868 CNTNAP4Q9C0A0 1308 aa35.5■■■■□ 3.27
TPRA1-208ENST00000483868 SLC4A2P04920 1241 aa35.49■■■■□ 3.27
TPRA1-208ENST00000483868 LRP10Q7Z4F1 713 aa35.49■■■■□ 3.27
TPRA1-208ENST00000483868 ZNF428Q96B54 188 aa35.49■■■■□ 3.27
TPRA1-208ENST00000483868 DDX21Q9NR30 783 aaKnown RBP eCLIP35.49■■■■□ 3.27
TPRA1-208ENST00000483868 DBF4Q9UBU7 674 aaPredicted RBP35.49■■■■□ 3.27
TPRA1-208ENST00000483868 ZNF827Q17R98 1081 aa35.48■■■■□ 3.27
TPRA1-208ENST00000483868 ALDH1L2Q3SY69 923 aa35.47■■■■□ 3.27
TPRA1-208ENST00000483868 RC3H1Q5TC82 1133 aaKnown RBP35.47■■■■□ 3.27
TPRA1-208ENST00000483868 MRPL50Q8N5N7 158 aaKnown RBP35.47■■■■□ 3.27
TPRA1-208ENST00000483868 STK31Q9BXU1 1019 aa35.47■■■■□ 3.27
TPRA1-208ENST00000483868 SMC4Q9NTJ3 1288 aa35.47■■■■□ 3.27
TPRA1-208ENST00000483868 G2E3Q7L622 706 aa35.46■■■■□ 3.27
TPRA1-208ENST00000483868 PHAXQ9H814 394 aaKnown RBP35.46■■■■□ 3.27
TPRA1-208ENST00000483868 ANO8Q9HCE9 1232 aaPredicted RBP35.46■■■■□ 3.27
TPRA1-208ENST00000483868 NUP188Q5SRE5 1749 aa35.46■■■■□ 3.27
TPRA1-208ENST00000483868 ERBB4Q15303 1308 aa35.46■■■■□ 3.27
TPRA1-208ENST00000483868 GNPATO15228 680 aa35.45■■■■□ 3.27
TPRA1-208ENST00000483868 ZNF330Q9Y3S2 320 aaPredicted RBP35.45■■■■□ 3.27
TPRA1-208ENST00000483868 AKT1S1Q96B36 256 aa35.43■■■■□ 3.26
TPRA1-208ENST00000483868 AK7Q96M32 723 aa35.43■■■■□ 3.26
TPRA1-208ENST00000483868 CHMP4AQ9BY43 222 aa35.43■■■■□ 3.26
TPRA1-208ENST00000483868 EIF5P55010 431 aaKnown RBP35.41■■■■□ 3.26
TPRA1-208ENST00000483868 RPS6KA4O75676 772 aa35.4■■■■□ 3.26
TPRA1-208ENST00000483868 IL6STP40189 918 aaPredicted RBP35.4■■■■□ 3.26
TPRA1-208ENST00000483868 HYPKQ9NX55 129 aa35.4■■■■□ 3.26
TPRA1-208ENST00000483868 AIMP1Q12904 312 aaKnown RBP35.39■■■■□ 3.26
TPRA1-208ENST00000483868 COPS6Q7L5N1 327 aa35.38■■■■□ 3.25
TPRA1-208ENST00000483868 XAGE3Q8WTP9 111 aa35.38■■■■□ 3.25
TPRA1-208ENST00000483868 UBR3Q6ZT12 1888 aa35.38■■■■□ 3.25
TPRA1-208ENST00000483868 CACNA1FO60840 1977 aa35.38■■■■□ 3.25
TPRA1-208ENST00000483868 PHF14O94880 888 aa35.37■■■■□ 3.25
TPRA1-208ENST00000483868 TTLL7Q6ZT98 887 aa35.37■■■■□ 3.25
TPRA1-208ENST00000483868 RTCBQ9Y3I0 505 aaKnown RBP35.37■■■■□ 3.25
TPRA1-208ENST00000483868 FLIIQ13045 1269 aa35.37■■■■□ 3.25
TPRA1-208ENST00000483868 BRPF1P55201 1214 aaPredicted RBP35.36■■■■□ 3.25
TPRA1-208ENST00000483868 NOB1Q9ULX3 412 aaKnown RBP35.36■■■■□ 3.25
TPRA1-208ENST00000483868 TFCP2L1Q9NZI6 479 aa35.35■■■■□ 3.25
TPRA1-208ENST00000483868 CENPBP07199 599 aaPredicted RBP35.35■■■■□ 3.25
TPRA1-208ENST00000483868 COL15A1P39059 1388 aa35.34■■■■□ 3.25
TPRA1-208ENST00000483868 TUBGCP6Q96RT7 1819 aa35.34■■■■□ 3.25
TPRA1-208ENST00000483868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.33■■■■□ 3.25
TPRA1-208ENST00000483868 SLC15A2Q16348 729 aa35.33■■■■□ 3.25
TPRA1-208ENST00000483868 FRAT1Q92837 279 aaPredicted RBP35.33■■■■□ 3.25
TPRA1-208ENST00000483868 ARXQ96QS3 562 aa35.33■■■■□ 3.25
TPRA1-208ENST00000483868 TBC1D2BQ9UPU7 963 aa35.33■■■■□ 3.25
TPRA1-208ENST00000483868 ARHGEF1Q92888 912 aaKnown RBP35.32■■■■□ 3.25
TPRA1-208ENST00000483868 HMGB2P26583 209 aaKnown RBP35.32■■■■□ 3.24
TPRA1-208ENST00000483868 PLIN1O60240 522 aa35.31■■■■□ 3.24
TPRA1-208ENST00000483868 STK32BQ9NY57 414 aa35.31■■■■□ 3.24
TPRA1-208ENST00000483868 TNNQ9UQP3 1299 aa35.3■■■■□ 3.24
TPRA1-208ENST00000483868 FKBP5Q13451 457 aaPredicted RBP35.29■■■■□ 3.24
TPRA1-208ENST00000483868 TRAPPC3LQ5T215 181 aa35.29■■■■□ 3.24
TPRA1-208ENST00000483868 DZIP3Q86Y13 1208 aaKnown RBP35.29■■■■□ 3.24
TPRA1-208ENST00000483868 SSFA2P28290 1259 aa35.28■■■■□ 3.24
TPRA1-208ENST00000483868 NPM2Q86SE8 214 aaKnown RBP35.27■■■■□ 3.24
TPRA1-208ENST00000483868 ZBTB3Q9H5J0 574 aa35.27■■■■□ 3.24
TPRA1-208ENST00000483868 SUPT16HQ9Y5B9 1047 aaKnown RBP35.27■■■■□ 3.24
TPRA1-208ENST00000483868 PNPLA7Q6ZV29 1317 aa35.27■■■■□ 3.24
TPRA1-208ENST00000483868 KIF16BQ96L93 1317 aa35.27■■■■□ 3.24
TPRA1-208ENST00000483868 F6X3S4 739 aa35.26■■■■□ 3.24
TPRA1-208ENST00000483868 SRP68Q9UHB9 627 aaKnown RBP35.26■■■■□ 3.24
TPRA1-208ENST00000483868 PI4KAP2A4QPH2 592 aa35.26■■■■□ 3.23
TPRA1-208ENST00000483868 COL23A1Q86Y22 540 aaPredicted RBP35.26■■■■□ 3.23
TPRA1-208ENST00000483868 PI4KAP1Q8N8J0 262 aa35.26■■■■□ 3.23
TPRA1-208ENST00000483868 ADCY9O60503 1353 aa35.26■■■■□ 3.23
TPRA1-208ENST00000483868 C4AP0C0L4 1744 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms