RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 DDX19BQ9UMR2 479 aa10.28□□□□□ -0.76
SORT1-205ENST00000483508 KIF16BQ96L93 1317 aa10.28□□□□□ -0.76
SORT1-205ENST00000483508 C5P01031 1676 aa10.28□□□□□ -0.76
SORT1-205ENST00000483508 CYP27B1O15528 508 aa10.27□□□□□ -0.77
SORT1-205ENST00000483508 RLBP1P12271 317 aa10.27□□□□□ -0.77
SORT1-205ENST00000483508 CALD1Q05682 793 aaKnown RBP10.27□□□□□ -0.77
SORT1-205ENST00000483508 ALDH1L2Q3SY69 923 aa10.27□□□□□ -0.77
SORT1-205ENST00000483508 UPF2Q9HAU5 1272 aaKnown RBP10.27□□□□□ -0.77
SORT1-205ENST00000483508 TMOD3Q9NYL9 352 aa10.27□□□□□ -0.77
SORT1-205ENST00000483508 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
SORT1-205ENST00000483508 IPO8O15397 1037 aaKnown RBP10.26□□□□□ -0.77
SORT1-205ENST00000483508 BRPF1P55201 1214 aaPredicted RBP10.26□□□□□ -0.77
SORT1-205ENST00000483508 EXOSC9Q06265 439 aaKnown RBP10.26□□□□□ -0.77
SORT1-205ENST00000483508 HDAC1Q13547 482 aaPredicted RBP10.26□□□□□ -0.77
SORT1-205ENST00000483508 CHMP4BQ9H444 224 aaKnown RBP10.26□□□□□ -0.77
SORT1-205ENST00000483508 SMC4Q9NTJ3 1288 aa10.26□□□□□ -0.77
SORT1-205ENST00000483508 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
SORT1-205ENST00000483508 PCDHB15Q9Y5E8 787 aa10.26□□□□□ -0.77
SORT1-205ENST00000483508 CD2APQ9Y5K6 639 aa10.26□□□□□ -0.77
SORT1-205ENST00000483508 COL24A1Q17RW2 1714 aa10.25□□□□□ -0.77
SORT1-205ENST00000483508 YBX3P16989 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
SORT1-205ENST00000483508 RIPK4P57078 832 aa10.25□□□□□ -0.77
SORT1-205ENST00000483508 NFKBIBQ15653 356 aa10.25□□□□□ -0.77
SORT1-205ENST00000483508 ATF7IPQ6VMQ6 1270 aa10.25□□□□□ -0.77
SORT1-205ENST00000483508 IFNL2Q8IZJ0 200 aa10.25□□□□□ -0.77
SORT1-205ENST00000483508 PIGBQ92521 554 aa10.25□□□□□ -0.77
SORT1-205ENST00000483508 ITGB4P16144 1822 aa10.25□□□□□ -0.77
SORT1-205ENST00000483508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
SORT1-205ENST00000483508 LOC102724428A0A0B4J2F2 783 aa10.24□□□□□ -0.77
SORT1-205ENST00000483508 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
SORT1-205ENST00000483508 SIK1P57059 783 aa10.24□□□□□ -0.77
SORT1-205ENST00000483508 EYA1Q99502 592 aa10.24□□□□□ -0.77
SORT1-205ENST00000483508 BCL2L13Q9BXK5 485 aa10.24□□□□□ -0.77
SORT1-205ENST00000483508 C4BP0C0L5 1744 aa10.24□□□□□ -0.77
SORT1-205ENST00000483508 TAF1LQ8IZX4 1826 aa10.23□□□□□ -0.77
SORT1-205ENST00000483508 GNPATO15228 680 aa10.23□□□□□ -0.77
SORT1-205ENST00000483508 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
SORT1-205ENST00000483508 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
SORT1-205ENST00000483508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.77
SORT1-205ENST00000483508 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
SORT1-205ENST00000483508 WWC3Q9ULE0 1092 aa10.23□□□□□ -0.77
SORT1-205ENST00000483508 TNNQ9UQP3 1299 aa10.23□□□□□ -0.77
SORT1-205ENST00000483508 PKD1L3Q7Z443 1732 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 TRIM27P14373 513 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 PHKG2P15735 406 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 SSFA2P28290 1259 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 LMOD3Q0VAK6 560 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 NFE2L2Q16236 605 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 SMIM5Q71RC9 77 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 ZNF526Q8TF50 670 aaPredicted RBP10.22□□□□□ -0.77
SORT1-205ENST00000483508 SSH1Q8WYL5 1049 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 TBC1D32Q96NH3 1257 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
SORT1-205ENST00000483508 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
SORT1-205ENST00000483508 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
SORT1-205ENST00000483508 HSP90AB1P08238 724 aaKnown RBP10.21□□□□□ -0.77
SORT1-205ENST00000483508 GSE1Q14687 1217 aa10.21□□□□□ -0.77
SORT1-205ENST00000483508 SMC5Q8IY18 1101 aa10.21□□□□□ -0.77
SORT1-205ENST00000483508 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.77
SORT1-205ENST00000483508 ARHGAP45Q92619 1136 aa10.21□□□□□ -0.77
SORT1-205ENST00000483508 IGSF1Q8N6C5 1336 aa10.21□□□□□ -0.78
SORT1-205ENST00000483508 TOGARAM1Q9Y4F4 1720 aa10.21□□□□□ -0.78
SORT1-205ENST00000483508 PRKAR2BP31323 418 aa10.2□□□□□ -0.78
SORT1-205ENST00000483508 SLC4A3P48751 1232 aa10.2□□□□□ -0.78
SORT1-205ENST00000483508 CABP4P57796 275 aa10.2□□□□□ -0.78
SORT1-205ENST00000483508 GNAI1P63096 354 aa10.2□□□□□ -0.78
SORT1-205ENST00000483508 EIF4A2Q14240 407 aaKnown RBP10.2□□□□□ -0.78
SORT1-205ENST00000483508 PLEKHO1Q53GL0 409 aaPredicted RBP10.2□□□□□ -0.78
SORT1-205ENST00000483508 TRAPPC3LQ5T215 181 aa10.2□□□□□ -0.78
SORT1-205ENST00000483508 ITPRIPQ8IWB1 547 aa10.2□□□□□ -0.78
SORT1-205ENST00000483508 IFT57Q9NWB7 429 aa10.2□□□□□ -0.78
SORT1-205ENST00000483508 NOB1Q9ULX3 412 aaKnown RBP10.2□□□□□ -0.78
SORT1-205ENST00000483508 RTCBQ9Y3I0 505 aaKnown RBP10.2□□□□□ -0.78
SORT1-205ENST00000483508 ATP10DQ9P241 1426 aa10.19□□□□□ -0.78
SORT1-205ENST00000483508 C1orf141Q5JVX7 400 aa10.19□□□□□ -0.78
SORT1-205ENST00000483508 ZBTB40Q9NUA8 1239 aa10.19□□□□□ -0.78
SORT1-205ENST00000483508 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
SORT1-205ENST00000483508 ERVV-2B6SEH9 535 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 MMP10P09238 476 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 IL13P35225 146 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 RFC4P35249 363 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 ITPK1Q13572 414 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 AMOTQ4VCS5 1084 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 ZNF530Q6P9A1 599 aaPredicted RBP10.18□□□□□ -0.78
SORT1-205ENST00000483508 AMIGO3Q86WK7 504 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 TMEM57Q8N5G2 664 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 ATG3Q9NT62 314 aa10.18□□□□□ -0.78
SORT1-205ENST00000483508 NCAPD2Q15021 1401 aa10.17□□□□□ -0.78
SORT1-205ENST00000483508 EIF5BO60841 1220 aaKnown RBP10.17□□□□□ -0.78
SORT1-205ENST00000483508 SEC24BO95487 1268 aa10.17□□□□□ -0.78
SORT1-205ENST00000483508 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
SORT1-205ENST00000483508 CCDC87Q9NVE4 849 aa10.17□□□□□ -0.78
SORT1-205ENST00000483508 PARP3Q9Y6F1 533 aa10.17□□□□□ -0.78
SORT1-205ENST00000483508 ZNF853P0CG23 659 aa10.16□□□□□ -0.78
SORT1-205ENST00000483508 NUCB1Q02818 461 aa10.16□□□□□ -0.78
SORT1-205ENST00000483508 MRPL50Q8N5N7 158 aaKnown RBP10.16□□□□□ -0.78
SORT1-205ENST00000483508 GCC1Q96CN9 775 aa10.16□□□□□ -0.78
SORT1-205ENST00000483508 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms