RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
CPNE1-225ENST00000483495 C5P01031 1676 aa16.47■□□□□ 0.23
CPNE1-225ENST00000483495 IBTKQ9P2D0 1353 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-225ENST00000483495 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
CPNE1-225ENST00000483495 EVA1CP58658 441 aa16.47■□□□□ 0.23
CPNE1-225ENST00000483495 ALDH1L1O75891 902 aa16.46■□□□□ 0.23
CPNE1-225ENST00000483495 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
CPNE1-225ENST00000483495 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
CPNE1-225ENST00000483495 FMNL2Q96PY5 1086 aa16.46■□□□□ 0.23
CPNE1-225ENST00000483495 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
CPNE1-225ENST00000483495 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.22
CPNE1-225ENST00000483495 GLI3P10071 1580 aa16.45■□□□□ 0.22
CPNE1-225ENST00000483495 COL14A1Q05707 1796 aaKnown RBP16.45■□□□□ 0.22
CPNE1-225ENST00000483495 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
CPNE1-225ENST00000483495 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
CPNE1-225ENST00000483495 MAP3K2Q9Y2U5 619 aa16.45■□□□□ 0.22
CPNE1-225ENST00000483495 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
CPNE1-225ENST00000483495 POLA2Q14181 598 aa16.44■□□□□ 0.22
CPNE1-225ENST00000483495 LRP10Q7Z4F1 713 aa16.44■□□□□ 0.22
CPNE1-225ENST00000483495 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-225ENST00000483495 NBPF7P0C2Y1 421 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-225ENST00000483495 GSPT1P15170 499 aaKnown RBP16.43■□□□□ 0.22
CPNE1-225ENST00000483495 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
CPNE1-225ENST00000483495 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
CPNE1-225ENST00000483495 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
CPNE1-225ENST00000483495 OSBPL3Q9H4L5 887 aa16.42■□□□□ 0.22
CPNE1-225ENST00000483495 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
CPNE1-225ENST00000483495 PAPPAQ13219 1627 aa16.42■□□□□ 0.22
CPNE1-225ENST00000483495 DISP2A7MBM2 1401 aa16.42■□□□□ 0.22
CPNE1-225ENST00000483495 SMARCA5O60264 1052 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-225ENST00000483495 COL16A1Q07092 1604 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-225ENST00000483495 UTYO14607 1347 aa16.41■□□□□ 0.22
CPNE1-225ENST00000483495 MTX1Q13505 466 aa16.41■□□□□ 0.22
CPNE1-225ENST00000483495 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-225ENST00000483495 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
CPNE1-225ENST00000483495 EXOC6BQ9Y2D4 811 aa16.41■□□□□ 0.22
CPNE1-225ENST00000483495 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 SALL3Q9BXA9 1300 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 TNS2Q63HR2 1409 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 LAMB4A4D0S4 1761 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
CPNE1-225ENST00000483495 PPP1R42Q7Z4L9 355 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
CPNE1-225ENST00000483495 APBB1O00213 710 aa16.39■□□□□ 0.21
CPNE1-225ENST00000483495 RAB11FIP3O75154 756 aa16.39■□□□□ 0.21
CPNE1-225ENST00000483495 CDC45O75419 566 aa16.39■□□□□ 0.21
CPNE1-225ENST00000483495 TBC1D9Q6ZT07 1266 aa16.39■□□□□ 0.21
CPNE1-225ENST00000483495 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
CPNE1-225ENST00000483495 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
CPNE1-225ENST00000483495 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
CPNE1-225ENST00000483495 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
CPNE1-225ENST00000483495 EIF5BO60841 1220 aaKnown RBP16.37■□□□□ 0.21
CPNE1-225ENST00000483495 MYL6BP14649 208 aa16.37■□□□□ 0.21
CPNE1-225ENST00000483495 RBM25P49756 843 aaKnown RBP16.37■□□□□ 0.21
CPNE1-225ENST00000483495 PDE1AP54750 535 aa16.37■□□□□ 0.21
CPNE1-225ENST00000483495 CWF19L2Q2TBE0 894 aaKnown RBP16.37■□□□□ 0.21
CPNE1-225ENST00000483495 RIC3Q7Z5B4 369 aa16.37■□□□□ 0.21
CPNE1-225ENST00000483495 C9orf78Q9NZ63 289 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-225ENST00000483495 PLCH1Q4KWH8 1693 aa16.37■□□□□ 0.21
CPNE1-225ENST00000483495 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
CPNE1-225ENST00000483495 IGKV5-2P06315 115 aa16.37■□□□□ 0.21
CPNE1-225ENST00000483495 METTL22Q9BUU2 404 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-225ENST00000483495 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-225ENST00000483495 GRM8O00222 908 aa16.36■□□□□ 0.21
CPNE1-225ENST00000483495 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
CPNE1-225ENST00000483495 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
CPNE1-225ENST00000483495 NEXNQ0ZGT2 675 aa16.35■□□□□ 0.21
CPNE1-225ENST00000483495 USP35Q9P2H5 1018 aa16.35■□□□□ 0.21
CPNE1-225ENST00000483495 STAP2Q9UGK3 403 aa16.35■□□□□ 0.21
CPNE1-225ENST00000483495 NEURL1BA8MQ27 555 aa16.35■□□□□ 0.21
CPNE1-225ENST00000483495 SDSP20132 328 aa16.35■□□□□ 0.21
CPNE1-225ENST00000483495 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
CPNE1-225ENST00000483495 BECN1Q14457 450 aa16.35■□□□□ 0.21
CPNE1-225ENST00000483495 PHLPP1O60346 1717 aa16.34■□□□□ 0.21
CPNE1-225ENST00000483495 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
CPNE1-225ENST00000483495 HSP90AB4PQ58FF6 505 aa16.34■□□□□ 0.21
CPNE1-225ENST00000483495 AOX1Q06278 1338 aa16.34■□□□□ 0.21
CPNE1-225ENST00000483495 NBPF26B4DH59 902 aa16.33■□□□□ 0.21
CPNE1-225ENST00000483495 MX1P20591 662 aa16.33■□□□□ 0.21
CPNE1-225ENST00000483495 NBPF14Q5TI25 921 aa16.33■□□□□ 0.21
CPNE1-225ENST00000483495 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.21
CPNE1-225ENST00000483495 NBPF15Q8N660 670 aa16.33■□□□□ 0.21
CPNE1-225ENST00000483495 TMOD3Q9NYL9 352 aa16.33■□□□□ 0.21
CPNE1-225ENST00000483495 GCKRQ14397 625 aa16.33■□□□□ 0.2
CPNE1-225ENST00000483495 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
CPNE1-225ENST00000483495 RHPN1Q8TCX5 695 aa16.33■□□□□ 0.2
CPNE1-225ENST00000483495 KIF1BPQ96EK5 621 aa16.33■□□□□ 0.2
CPNE1-225ENST00000483495 KAZALD1Q96I82 304 aa16.33■□□□□ 0.2
CPNE1-225ENST00000483495 LRP6O75581 1613 aa16.33■□□□□ 0.2
CPNE1-225ENST00000483495 SUCLG2Q96I99 432 aa16.32■□□□□ 0.2
CPNE1-225ENST00000483495 COL15A1P39059 1388 aa16.32■□□□□ 0.2
CPNE1-225ENST00000483495 TOM1O60784 492 aa16.31■□□□□ 0.2
CPNE1-225ENST00000483495 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-225ENST00000483495 MYD88Q99836 296 aa16.31■□□□□ 0.2
CPNE1-225ENST00000483495 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
CPNE1-225ENST00000483495 PIGBQ92521 554 aa16.31■□□□□ 0.2
CPNE1-225ENST00000483495 CDCA7Q9BWT1 371 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms