RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 CANXP27824 592 aaKnown RBP31.15■■■□□ 2.58
RHBDF1-208ENST00000482904 PLEKHF1Q96S99 279 aa31.15■■■□□ 2.58
RHBDF1-208ENST00000482904 TEX13AQ9BXU3 409 aaPredicted RBP31.15■■■□□ 2.58
RHBDF1-208ENST00000482904 KCNQ3O43525 872 aa31.12■■■□□ 2.57
RHBDF1-208ENST00000482904 FKBP8Q14318 412 aa31.12■■■□□ 2.57
RHBDF1-208ENST00000482904 NFE2L2Q16236 605 aa31.12■■■□□ 2.57
RHBDF1-208ENST00000482904 YBX3P16989 372 aaKnown RBP eCLIP31.11■■■□□ 2.57
RHBDF1-208ENST00000482904 USPL1Q5W0Q7 1092 aa31.11■■■□□ 2.57
RHBDF1-208ENST00000482904 C10orf71Q711Q0 1435 aa31.11■■■□□ 2.57
RHBDF1-208ENST00000482904 ZNF330Q9Y3S2 320 aaPredicted RBP31.11■■■□□ 2.57
RHBDF1-208ENST00000482904 GRIN3BO60391 1043 aa31.1■■■□□ 2.57
RHBDF1-208ENST00000482904 WWC3Q9ULE0 1092 aa31.09■■■□□ 2.57
RHBDF1-208ENST00000482904 NARFQ9UHQ1 456 aa31.08■■■□□ 2.57
RHBDF1-208ENST00000482904 WDR43Q15061 677 aaKnown RBP eCLIP31.07■■■□□ 2.56
RHBDF1-208ENST00000482904 TAF7Q15545 349 aaPredicted RBP31.07■■■□□ 2.56
RHBDF1-208ENST00000482904 NPM2Q86SE8 214 aaKnown RBP31.07■■■□□ 2.56
RHBDF1-208ENST00000482904 A0A087WZG4 1122 aa31.06■■■□□ 2.56
RHBDF1-208ENST00000482904 PRKRIP1Q9H875 184 aaPredicted RBP31.06■■■□□ 2.56
RHBDF1-208ENST00000482904 DDR1Q08345 913 aa31.05■■■□□ 2.56
RHBDF1-208ENST00000482904 PXDNLA1KZ92 1463 aa31.05■■■□□ 2.56
RHBDF1-208ENST00000482904 DLG5Q8TDM6 1919 aa31.04■■■□□ 2.56
RHBDF1-208ENST00000482904 SNRPA1P09661 255 aaKnown RBP31.04■■■□□ 2.56
RHBDF1-208ENST00000482904 EIF5P55010 431 aaKnown RBP31.03■■■□□ 2.56
RHBDF1-208ENST00000482904 PNISRQ8TF01 805 aaKnown RBP31.03■■■□□ 2.56
RHBDF1-208ENST00000482904 THUMPD2Q9BTF0 503 aaKnown RBP31.03■■■□□ 2.56
RHBDF1-208ENST00000482904 UTRNP46939 3433 aa31.02■■■□□ 2.56
RHBDF1-208ENST00000482904 A1BGP04217 495 aa31.02■■■□□ 2.56
RHBDF1-208ENST00000482904 TGFB2P61812 414 aa31.02■■■□□ 2.56
RHBDF1-208ENST00000482904 MIS18AQ9NYP9 233 aa31.02■■■□□ 2.56
RHBDF1-208ENST00000482904 KIF13BQ9NQT8 1826 aa31.02■■■□□ 2.56
RHBDF1-208ENST00000482904 CHD4Q14839 1912 aa31.01■■■□□ 2.55
RHBDF1-208ENST00000482904 IL6STP40189 918 aaPredicted RBP31.01■■■□□ 2.55
RHBDF1-208ENST00000482904 PRAMEF22A3QJZ6 481 aa31■■■□□ 2.55
RHBDF1-208ENST00000482904 POLRMTO00411 1230 aaKnown RBP31■■■□□ 2.55
RHBDF1-208ENST00000482904 RIPK4P57078 832 aa30.99■■■□□ 2.55
RHBDF1-208ENST00000482904 CCDC146Q8IYE0 955 aa30.99■■■□□ 2.55
RHBDF1-208ENST00000482904 USP16Q9Y5T5 823 aa30.99■■■□□ 2.55
RHBDF1-208ENST00000482904 SCN7AQ01118 1682 aa30.98■■■□□ 2.55
RHBDF1-208ENST00000482904 LMOD3Q0VAK6 560 aa30.98■■■□□ 2.55
RHBDF1-208ENST00000482904 NFIXQ14938 502 aa30.98■■■□□ 2.55
RHBDF1-208ENST00000482904 BCL2L12Q9HB09 334 aa30.98■■■□□ 2.55
RHBDF1-208ENST00000482904 A0A0G2JLW4 131 aa30.97■■■□□ 2.55
RHBDF1-208ENST00000482904 TM4SF1P30408 202 aa30.97■■■□□ 2.55
RHBDF1-208ENST00000482904 KIAA1551Q9HCM1 1747 aa30.96■■■□□ 2.55
RHBDF1-208ENST00000482904 PIP4K2AP48426 406 aaPredicted RBP30.96■■■□□ 2.55
RHBDF1-208ENST00000482904 TBC1D2BQ9UPU7 963 aa30.96■■■□□ 2.55
RHBDF1-208ENST00000482904 KDM3BQ7LBC6 1761 aa30.95■■■□□ 2.55
RHBDF1-208ENST00000482904 N4BP2Q86UW6 1770 aaPredicted RBP30.95■■■□□ 2.55
RHBDF1-208ENST00000482904 DPEP1P16444 411 aa30.95■■■□□ 2.55
RHBDF1-208ENST00000482904 BICDL1Q6ZP65 573 aa30.95■■■□□ 2.55
RHBDF1-208ENST00000482904 TMPOP42166 694 aaKnown RBP30.94■■■□□ 2.54
RHBDF1-208ENST00000482904 ZNF784Q8NCA9 323 aaPredicted RBP30.94■■■□□ 2.54
RHBDF1-208ENST00000482904 RRP7AQ9Y3A4 280 aaKnown RBP30.94■■■□□ 2.54
RHBDF1-208ENST00000482904 GOLGB1Q14789 3259 aaKnown RBP30.93■■■□□ 2.54
RHBDF1-208ENST00000482904 BCS1LQ9Y276 419 aa30.93■■■□□ 2.54
RHBDF1-208ENST00000482904 NEUROD2Q15784 382 aa30.92■■■□□ 2.54
RHBDF1-208ENST00000482904 DZIP3Q86Y13 1208 aaKnown RBP30.92■■■□□ 2.54
RHBDF1-208ENST00000482904 RUNDC1Q96C34 613 aa30.92■■■□□ 2.54
RHBDF1-208ENST00000482904 LAMB4A4D0S4 1761 aa30.92■■■□□ 2.54
RHBDF1-208ENST00000482904 SERPINB2P05120 415 aa30.91■■■□□ 2.54
RHBDF1-208ENST00000482904 TSPYL4Q9UJ04 414 aa30.91■■■□□ 2.54
RHBDF1-208ENST00000482904 ADAMTS8Q9UP79 889 aa30.91■■■□□ 2.54
RHBDF1-208ENST00000482904 ZNF316A6NFI3 1004 aaPredicted RBP30.9■■■□□ 2.54
RHBDF1-208ENST00000482904 EIF4A1P60842 406 aaKnown RBP30.89■■■□□ 2.54
RHBDF1-208ENST00000482904 TBC1D9BQ66K14 1250 aa30.89■■■□□ 2.54
RHBDF1-208ENST00000482904 CAMTA2O94983 1202 aa30.88■■■□□ 2.53
RHBDF1-208ENST00000482904 CARMIL3Q8ND23 1372 aa30.88■■■□□ 2.53
RHBDF1-208ENST00000482904 GIGYF1O75420 1035 aaPredicted RBP30.86■■■□□ 2.53
RHBDF1-208ENST00000482904 PIM2Q9P1W9 311 aa30.86■■■□□ 2.53
RHBDF1-208ENST00000482904 NRXN2Q9P2S2 1712 aa30.86■■■□□ 2.53
RHBDF1-208ENST00000482904 BCORQ6W2J9 1755 aa30.86■■■□□ 2.53
RHBDF1-208ENST00000482904 NPHP1O15259 732 aa30.85■■■□□ 2.53
RHBDF1-208ENST00000482904 CHRNA5P30532 468 aa30.85■■■□□ 2.53
RHBDF1-208ENST00000482904 ZNF652Q9Y2D9 606 aa30.85■■■□□ 2.53
RHBDF1-208ENST00000482904 AFDNP55196 1824 aaKnown RBP30.84■■■□□ 2.53
RHBDF1-208ENST00000482904 NBPF26B4DH59 902 aa30.84■■■□□ 2.53
RHBDF1-208ENST00000482904 NBPF10Q6P3W6 841 aaKnown RBP30.84■■■□□ 2.53
RHBDF1-208ENST00000482904 NBPF15Q8N660 670 aa30.84■■■□□ 2.53
RHBDF1-208ENST00000482904 SETDB2Q96T68 719 aa30.83■■■□□ 2.53
RHBDF1-208ENST00000482904 KCNA3P22001 575 aa30.82■■■□□ 2.52
RHBDF1-208ENST00000482904 DALRD3Q5D0E6 543 aaKnown RBP30.82■■■□□ 2.52
RHBDF1-208ENST00000482904 BABAM1Q9NWV8 329 aa30.81■■■□□ 2.52
RHBDF1-208ENST00000482904 BRCA1P38398 1863 aaKnown RBP30.8■■■□□ 2.52
RHBDF1-208ENST00000482904 CNBD1Q8NA66 436 aa30.79■■■□□ 2.52
RHBDF1-208ENST00000482904 ARHGAP27Q6ZUM4 889 aa30.78■■■□□ 2.52
RHBDF1-208ENST00000482904 NGEFQ8N5V2 710 aa30.78■■■□□ 2.52
RHBDF1-208ENST00000482904 LAS1LQ9Y4W2 734 aaKnown RBP30.78■■■□□ 2.52
RHBDF1-208ENST00000482904 ATP10DQ9P241 1426 aa30.78■■■□□ 2.52
RHBDF1-208ENST00000482904 PRR5LQ6MZQ0 368 aa30.77■■■□□ 2.52
RHBDF1-208ENST00000482904 CLEC4GQ6UXB4 293 aa30.77■■■□□ 2.52
RHBDF1-208ENST00000482904 C2CD5Q86YS7 1000 aa30.77■■■□□ 2.52
RHBDF1-208ENST00000482904 TRIM35Q9UPQ4 493 aa30.77■■■□□ 2.52
RHBDF1-208ENST00000482904 MYL6BP14649 208 aa30.76■■■□□ 2.51
RHBDF1-208ENST00000482904 ST5P78524 1137 aa30.76■■■□□ 2.51
RHBDF1-208ENST00000482904 ANP32CO43423 234 aa30.75■■■□□ 2.51
RHBDF1-208ENST00000482904 CCDC24Q8N4L8 307 aa30.75■■■□□ 2.51
RHBDF1-208ENST00000482904 ERBB4Q15303 1308 aa30.74■■■□□ 2.51
RHBDF1-208ENST00000482904 H0YIN7 160 aa30.74■■■□□ 2.51
RHBDF1-208ENST00000482904 KIF6Q6ZMV9 814 aa30.74■■■□□ 2.51
RHBDF1-208ENST00000482904 ADCY9O60503 1353 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms