RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SOX12O15370 315 aa9.89□□□□□ -0.83
CHD6-209ENST00000482596 AOC2O75106 756 aa9.89□□□□□ -0.83
CHD6-209ENST00000482596 NLRP2Q9NX02 1062 aa9.89□□□□□ -0.83
CHD6-209ENST00000482596 METRNQ9UJH8 293 aa9.89□□□□□ -0.83
CHD6-209ENST00000482596 ABT1Q9ULW3 272 aaKnown RBP9.89□□□□□ -0.83
CHD6-209ENST00000482596 PAXIP1Q6ZW49 1069 aaPredicted RBP9.88□□□□□ -0.83
CHD6-209ENST00000482596 TRIM35Q9UPQ4 493 aa9.88□□□□□ -0.83
CHD6-209ENST00000482596 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
CHD6-209ENST00000482596 CHRNA5P30532 468 aa9.87□□□□□ -0.83
CHD6-209ENST00000482596 LDHDQ86WU2 507 aa9.87□□□□□ -0.83
CHD6-209ENST00000482596 CCDC87Q9NVE4 849 aa9.87□□□□□ -0.83
CHD6-209ENST00000482596 UNC80Q8N2C7 3258 aa9.87□□□□□ -0.83
CHD6-209ENST00000482596 SSFA2P28290 1259 aa9.86□□□□□ -0.83
CHD6-209ENST00000482596 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
CHD6-209ENST00000482596 DICER1Q9UPY3 1922 aaKnown RBP9.86□□□□□ -0.83
CHD6-209ENST00000482596 ADGRB1O14514 1584 aa9.85□□□□□ -0.83
CHD6-209ENST00000482596 DDNO94850 711 aaPredicted RBP9.85□□□□□ -0.83
CHD6-209ENST00000482596 PSEN1P49768 467 aa9.85□□□□□ -0.83
CHD6-209ENST00000482596 COLQQ9Y215 455 aaPredicted RBP9.85□□□□□ -0.83
CHD6-209ENST00000482596 ADAMTSL1Q8N6G6 1762 aa9.85□□□□□ -0.83
CHD6-209ENST00000482596 PALLDQ8WX93 1383 aa9.85□□□□□ -0.83
CHD6-209ENST00000482596 NSD3Q9BZ95 1437 aa9.84□□□□□ -0.83
CHD6-209ENST00000482596 FMR1Q06787 632 aaKnown RBP eCLIP9.84□□□□□ -0.83
CHD6-209ENST00000482596 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
CHD6-209ENST00000482596 CDK19Q9BWU1 502 aa9.84□□□□□ -0.83
CHD6-209ENST00000482596 NFAT5O94916 1531 aa9.83□□□□□ -0.84
CHD6-209ENST00000482596 NFKBIEO00221 500 aa9.83□□□□□ -0.84
CHD6-209ENST00000482596 ECE1P42892 770 aa9.83□□□□□ -0.84
CHD6-209ENST00000482596 SCN4AP35499 1836 aa9.82□□□□□ -0.84
CHD6-209ENST00000482596 CA12O43570 354 aa9.82□□□□□ -0.84
CHD6-209ENST00000482596 EAPPQ56P03 285 aaPredicted RBP9.82□□□□□ -0.84
CHD6-209ENST00000482596 IER5LQ5T953 404 aa9.82□□□□□ -0.84
CHD6-209ENST00000482596 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
CHD6-209ENST00000482596 LINC00116Q8NCU8 138 aa9.82□□□□□ -0.84
CHD6-209ENST00000482596 TAF1DQ9H5J8 278 aaPredicted RBP9.82□□□□□ -0.84
CHD6-209ENST00000482596 SEC24BO95487 1268 aa9.81□□□□□ -0.84
CHD6-209ENST00000482596 COL25A1Q9BXS0 654 aaPredicted RBP9.81□□□□□ -0.84
CHD6-209ENST00000482596 MAP2P11137 1827 aaKnown RBP9.81□□□□□ -0.84
CHD6-209ENST00000482596 POTEB2H3BUK9 544 aa9.8□□□□□ -0.84
CHD6-209ENST00000482596 GNPATO15228 680 aa9.8□□□□□ -0.84
CHD6-209ENST00000482596 ECM2O94769 699 aaPredicted RBP9.8□□□□□ -0.84
CHD6-209ENST00000482596 MAP2K2P36507 400 aa9.8□□□□□ -0.84
CHD6-209ENST00000482596 TMF1P82094 1093 aa9.8□□□□□ -0.84
CHD6-209ENST00000482596 CNTROBQ8N137 903 aa9.8□□□□□ -0.84
CHD6-209ENST00000482596 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
CHD6-209ENST00000482596 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
CHD6-209ENST00000482596 ITGAEP38570 1179 aa9.79□□□□□ -0.84
CHD6-209ENST00000482596 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
CHD6-209ENST00000482596 CIAPIN1Q6FI81 312 aa9.79□□□□□ -0.84
CHD6-209ENST00000482596 NLGN1Q8N2Q7 840 aa9.79□□□□□ -0.84
CHD6-209ENST00000482596 HPS5Q9UPZ3 1129 aa9.79□□□□□ -0.84
CHD6-209ENST00000482596 CEP290O15078 2479 aa9.79□□□□□ -0.84
CHD6-209ENST00000482596 BRCA2P51587 3418 aa9.79□□□□□ -0.84
CHD6-209ENST00000482596 RANBP2P49792 3224 aaKnown RBP9.78□□□□□ -0.84
CHD6-209ENST00000482596 VCANP13611 3396 aa9.78□□□□□ -0.84
CHD6-209ENST00000482596 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
CHD6-209ENST00000482596 ERFEQ4G0M1 354 aa9.78□□□□□ -0.84
CHD6-209ENST00000482596 KCNH5Q8NCM2 988 aa9.78□□□□□ -0.84
CHD6-209ENST00000482596 ANKRD24Q8TF21 1146 aa9.78□□□□□ -0.84
CHD6-209ENST00000482596 DDX21Q9NR30 783 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHD6-209ENST00000482596 TRPM7Q96QT4 1865 aa9.78□□□□□ -0.84
CHD6-209ENST00000482596 LTN1O94822 1766 aa9.78□□□□□ -0.84
CHD6-209ENST00000482596 SPTBN5Q9NRC6 3674 aaKnown RBP9.77□□□□□ -0.84
CHD6-209ENST00000482596 POTEFA5A3E0 1075 aa9.77□□□□□ -0.85
CHD6-209ENST00000482596 GYS1P13807 737 aa9.77□□□□□ -0.85
CHD6-209ENST00000482596 BRPF1P55201 1214 aaPredicted RBP9.77□□□□□ -0.85
CHD6-209ENST00000482596 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
CHD6-209ENST00000482596 RTN4Q9NQC3 1192 aaKnown RBP9.77□□□□□ -0.85
CHD6-209ENST00000482596 ITGB4P16144 1822 aa9.77□□□□□ -0.85
CHD6-209ENST00000482596 DLEC1Q9Y238 1755 aa9.76□□□□□ -0.85
CHD6-209ENST00000482596 IQCA1LA6NCM1 817 aa9.76□□□□□ -0.85
CHD6-209ENST00000482596 ZIC5Q96T25 663 aa9.76□□□□□ -0.85
CHD6-209ENST00000482596 FER1L6Q2WGJ9 1857 aa9.76□□□□□ -0.85
CHD6-209ENST00000482596 MKRN3Q13064 507 aaKnown RBP9.75□□□□□ -0.85
CHD6-209ENST00000482596 ITPK1Q13572 414 aa9.75□□□□□ -0.85
CHD6-209ENST00000482596 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
CHD6-209ENST00000482596 CST9Q5W186 159 aa9.75□□□□□ -0.85
CHD6-209ENST00000482596 MPRIPQ6WCQ1 1025 aa9.75□□□□□ -0.85
CHD6-209ENST00000482596 TLL2Q9Y6L7 1015 aa9.75□□□□□ -0.85
CHD6-209ENST00000482596 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
CHD6-209ENST00000482596 RGPD2P0DJD1 1756 aa9.74□□□□□ -0.85
CHD6-209ENST00000482596 PLCG2P16885 1265 aa9.74□□□□□ -0.85
CHD6-209ENST00000482596 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
CHD6-209ENST00000482596 DDR1Q08345 913 aa9.74□□□□□ -0.85
CHD6-209ENST00000482596 L3MBTL3Q96JM7 780 aaPredicted RBP9.74□□□□□ -0.85
CHD6-209ENST00000482596 RAPGEFL1Q9UHV5 662 aa9.74□□□□□ -0.85
CHD6-209ENST00000482596 FAM208AQ9UK61 1670 aaKnown RBP9.74□□□□□ -0.85
CHD6-209ENST00000482596 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
CHD6-209ENST00000482596 CTU1Q7Z7A3 348 aaKnown RBP9.73□□□□□ -0.85
CHD6-209ENST00000482596 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
CHD6-209ENST00000482596 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
CHD6-209ENST00000482596 CABP2Q9NPB3 220 aa9.73□□□□□ -0.85
CHD6-209ENST00000482596 PRDM6Q9NQX0 595 aa9.73□□□□□ -0.85
CHD6-209ENST00000482596 TRAF5O00463 557 aa9.72□□□□□ -0.85
CHD6-209ENST00000482596 EPHX2P34913 555 aa9.72□□□□□ -0.85
CHD6-209ENST00000482596 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
CHD6-209ENST00000482596 OTUD5Q96G74 571 aa9.72□□□□□ -0.85
CHD6-209ENST00000482596 OCEL1Q9H607 264 aa9.72□□□□□ -0.85
CHD6-209ENST00000482596 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
CHD6-209ENST00000482596 CACNA1AO00555 2505 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms