RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SLC27A3Q5K4L6 730 aa10.31□□□□□ -0.76
SF3B1-210ENST00000482158 NBPF15Q8N660 670 aa10.31□□□□□ -0.76
SF3B1-210ENST00000482158 RHBDD1Q8TEB9 315 aa10.31□□□□□ -0.76
SF3B1-210ENST00000482158 PARP3Q9Y6F1 533 aa10.31□□□□□ -0.76
SF3B1-210ENST00000482158 SOS2Q07890 1332 aaPredicted RBP10.31□□□□□ -0.76
SF3B1-210ENST00000482158 SPATA31C2B4DYI2 1134 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 ST8SIA5O15466 376 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 HIRAP54198 1017 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-210ENST00000482158 C4orf17Q53FE4 359 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 TMEM214Q6NUQ4 689 aaKnown RBP10.3□□□□□ -0.76
SF3B1-210ENST00000482158 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-210ENST00000482158 ZFP42Q96MM3 310 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 SAP130Q9H0E3 1048 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 AAASQ9NRG9 546 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 CABP1Q9NZU7 370 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 DACH1Q9UI36 760 aa10.3□□□□□ -0.76
SF3B1-210ENST00000482158 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-210ENST00000482158 SERTM1A2A2V5 107 aa10.29□□□□□ -0.76
SF3B1-210ENST00000482158 SOWAHDA6NJG2 315 aa10.29□□□□□ -0.76
SF3B1-210ENST00000482158 LAPTM4AQ15012 233 aa10.29□□□□□ -0.76
SF3B1-210ENST00000482158 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
SF3B1-210ENST00000482158 NIFKQ9BYG3 293 aaKnown RBP10.29□□□□□ -0.76
SF3B1-210ENST00000482158 QTRT2Q9H974 415 aaKnown RBP10.29□□□□□ -0.76
SF3B1-210ENST00000482158 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.76
SF3B1-210ENST00000482158 TTLL8A6PVC2 850 aa10.27□□□□□ -0.77
SF3B1-210ENST00000482158 POU4F2Q12837 409 aa10.27□□□□□ -0.77
SF3B1-210ENST00000482158 ZNF211Q13398 564 aaPredicted RBP10.27□□□□□ -0.77
SF3B1-210ENST00000482158 SCARF1Q14162 830 aa10.27□□□□□ -0.77
SF3B1-210ENST00000482158 ECM1Q16610 540 aa10.27□□□□□ -0.77
SF3B1-210ENST00000482158 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
SF3B1-210ENST00000482158 EGFL7Q9UHF1 273 aa10.27□□□□□ -0.77
SF3B1-210ENST00000482158 HCN4Q9Y3Q4 1203 aa10.27□□□□□ -0.77
SF3B1-210ENST00000482158 ABL1P00519 1130 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 TXLNAP40222 546 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 MTMR3Q13615 1198 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 GNASQ5JWF2 1037 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 COX20Q5RI15 118 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 PRICKLE2Q7Z3G6 844 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 VTI1AQ96AJ9 217 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 ATP13A2Q9NQ11 1180 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 LRFN2Q9ULH4 789 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 ZNF232Q9UNY5 417 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
SF3B1-210ENST00000482158 FIGNL2A6NMB9 653 aa10.25□□□□□ -0.77
SF3B1-210ENST00000482158 ICMTO60725 284 aa10.25□□□□□ -0.77
SF3B1-210ENST00000482158 PHKA2P46019 1235 aa10.25□□□□□ -0.77
SF3B1-210ENST00000482158 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
SF3B1-210ENST00000482158 NBPF10Q6P3W6 841 aaKnown RBP10.25□□□□□ -0.77
SF3B1-210ENST00000482158 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
SF3B1-210ENST00000482158 TNFRSF10BO14763 440 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 GTF2E1P29083 439 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-210ENST00000482158 C16orf46Q6P387 395 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 ALDH16A1Q8IZ83 802 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 HELQQ8TDG4 1101 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 MYO19Q96H55 970 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 NGLY1Q96IV0 654 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
SF3B1-210ENST00000482158 DNMT3LQ9UJW3 386 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
SF3B1-210ENST00000482158 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
SF3B1-210ENST00000482158 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
SF3B1-210ENST00000482158 PHACTR1Q9C0D0 580 aa10.23□□□□□ -0.77
SF3B1-210ENST00000482158 RHOQP17081 205 aa10.22□□□□□ -0.77
SF3B1-210ENST00000482158 FKBP4Q02790 459 aaKnown RBP eCLIP10.22□□□□□ -0.77
SF3B1-210ENST00000482158 WDR44Q5JSH3 913 aa10.22□□□□□ -0.77
SF3B1-210ENST00000482158 FAM26DQ5JW98 314 aa10.22□□□□□ -0.77
SF3B1-210ENST00000482158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.22□□□□□ -0.773e-16■■■■■ 119.2
SF3B1-210ENST00000482158 H3BRB1 525 aa10.21□□□□□ -0.77
SF3B1-210ENST00000482158 NPR3P17342 541 aa10.21□□□□□ -0.77
SF3B1-210ENST00000482158 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
SF3B1-210ENST00000482158 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.77
SF3B1-210ENST00000482158 LCE2BO14633 110 aa10.2□□□□□ -0.78
SF3B1-210ENST00000482158 ATP4AP20648 1035 aa10.2□□□□□ -0.78
SF3B1-210ENST00000482158 SF3B2Q13435 895 aaKnown RBP10.2□□□□□ -0.78
SF3B1-210ENST00000482158 RTN1Q16799 776 aa10.2□□□□□ -0.78
SF3B1-210ENST00000482158 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
SF3B1-210ENST00000482158 ARHGAP4P98171 946 aa10.19□□□□□ -0.78
SF3B1-210ENST00000482158 AIDAQ96BJ3 306 aa10.19□□□□□ -0.78
SF3B1-210ENST00000482158 ZDHHC3Q9NYG2 299 aa10.19□□□□□ -0.78
SF3B1-210ENST00000482158 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
SF3B1-210ENST00000482158 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
SF3B1-210ENST00000482158 GLYCTKQ8IVS8 523 aa10.18□□□□□ -0.78
SF3B1-210ENST00000482158 KLK14Q9P0G3 267 aa10.18□□□□□ -0.78
SF3B1-210ENST00000482158 BCS1LQ9Y276 419 aa10.18□□□□□ -0.78
SF3B1-210ENST00000482158 MPSTP25325 297 aa10.17□□□□□ -0.78
SF3B1-210ENST00000482158 DGKZQ13574 1117 aa10.17□□□□□ -0.78
SF3B1-210ENST00000482158 TIMMDC1Q9NPL8 285 aa10.17□□□□□ -0.78
SF3B1-210ENST00000482158 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
SF3B1-210ENST00000482158 ZBTB39O15060 712 aa10.16□□□□□ -0.78
SF3B1-210ENST00000482158 MSX1P28360 303 aa10.16□□□□□ -0.78
SF3B1-210ENST00000482158 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.16□□□□□ -0.78
SF3B1-210ENST00000482158 NBPF1Q3BBV0 1214 aa10.16□□□□□ -0.78
SF3B1-210ENST00000482158 C11orf91Q3C1V1 193 aa10.16□□□□□ -0.78
SF3B1-210ENST00000482158 STIM2Q9P246 746 aa10.16□□□□□ -0.78
SF3B1-210ENST00000482158 A0A1B0GTH6 734 aa10.15□□□□□ -0.78
SF3B1-210ENST00000482158 CCDC27Q2M243 656 aa10.15□□□□□ -0.78
SF3B1-210ENST00000482158 NOM1Q5C9Z4 860 aaKnown RBP10.15□□□□□ -0.78
SF3B1-210ENST00000482158 ETFBKMTQ8IXQ9 262 aa10.15□□□□□ -0.78
SF3B1-210ENST00000482158 BIN2Q9UBW5 565 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms