RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 GLTPD2A6NH11 291 aa23.81■■□□□ 1.4
RXRB-203ENST00000481441 LMNB1P20700 586 aa23.81■■□□□ 1.4
RXRB-203ENST00000481441 NFIXQ14938 502 aa23.81■■□□□ 1.4
RXRB-203ENST00000481441 SULT6B1Q6IMI4 303 aa23.81■■□□□ 1.4
RXRB-203ENST00000481441 TIAM2Q8IVF5 1701 aa23.81■■□□□ 1.4
RXRB-203ENST00000481441 VEGFAP15692 232 aaPredicted RBP23.8■■□□□ 1.4
RXRB-203ENST00000481441 PCNTO95613 3336 aa23.79■■□□□ 1.4
RXRB-203ENST00000481441 CYP19A1P11511 503 aaPredicted RBP23.79■■□□□ 1.4
RXRB-203ENST00000481441 PANK3Q9H999 370 aa23.79■■□□□ 1.4
RXRB-203ENST00000481441 NARFQ9UHQ1 456 aa23.79■■□□□ 1.4
RXRB-203ENST00000481441 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
RXRB-203ENST00000481441 SLC52A2Q9HAB3 445 aa23.78■■□□□ 1.4
RXRB-203ENST00000481441 MRC1P22897 1456 aa23.77■■□□□ 1.4
RXRB-203ENST00000481441 COL15A1P39059 1388 aa23.77■■□□□ 1.4
RXRB-203ENST00000481441 BCL2L12Q9HB09 334 aa23.77■■□□□ 1.4
RXRB-203ENST00000481441 AKAP4Q5JQC9 854 aa23.76■■□□□ 1.39
RXRB-203ENST00000481441 TTLL6Q8N841 843 aa23.76■■□□□ 1.39
RXRB-203ENST00000481441 TIMELESSQ9UNS1 1208 aa23.76■■□□□ 1.39
RXRB-203ENST00000481441 SERPINB2P05120 415 aa23.75■■□□□ 1.39
RXRB-203ENST00000481441 HSPA1AP0DMV8 641 aaKnown RBP23.75■■□□□ 1.39
RXRB-203ENST00000481441 HSPA1BP0DMV9 641 aaKnown RBP23.75■■□□□ 1.39
RXRB-203ENST00000481441 IL13P35225 146 aa23.75■■□□□ 1.39
RXRB-203ENST00000481441 MORC1Q86VD1 984 aa23.75■■□□□ 1.39
RXRB-203ENST00000481441 LGR6Q9HBX8 967 aa23.75■■□□□ 1.39
RXRB-203ENST00000481441 NFKBIEO00221 500 aa23.74■■□□□ 1.39
RXRB-203ENST00000481441 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
RXRB-203ENST00000481441 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
RXRB-203ENST00000481441 CARMIL3Q8ND23 1372 aa23.73■■□□□ 1.39
RXRB-203ENST00000481441 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
RXRB-203ENST00000481441 POTECB2RU33 542 aa23.72■■□□□ 1.39
RXRB-203ENST00000481441 RNMTO43148 476 aaKnown RBP23.71■■□□□ 1.39
RXRB-203ENST00000481441 DICER1Q9UPY3 1922 aaKnown RBP23.71■■□□□ 1.39
RXRB-203ENST00000481441 ANKRD31Q8N7Z5 1873 aa23.71■■□□□ 1.39
RXRB-203ENST00000481441 UBR2Q8IWV8 1755 aa23.7■■□□□ 1.38
RXRB-203ENST00000481441 H0YIN7 160 aa23.7■■□□□ 1.38
RXRB-203ENST00000481441 FER1L6Q2WGJ9 1857 aa23.69■■□□□ 1.38
RXRB-203ENST00000481441 VSIG10Q8N0Z9 540 aa23.68■■□□□ 1.38
RXRB-203ENST00000481441 DPY19L2Q6NUT2 758 aa23.66■■□□□ 1.38
RXRB-203ENST00000481441 COL11A2P13942 1736 aaPredicted RBP23.66■■□□□ 1.38
RXRB-203ENST00000481441 CANXP27824 592 aaKnown RBP23.65■■□□□ 1.38
RXRB-203ENST00000481441 HSPA5P11021 654 aaKnown RBP23.64■■□□□ 1.38
RXRB-203ENST00000481441 EIF5P55010 431 aaKnown RBP23.64■■□□□ 1.38
RXRB-203ENST00000481441 EIF4G2P78344 907 aaKnown RBP eCLIP23.64■■□□□ 1.38
RXRB-203ENST00000481441 BICDL1Q6ZP65 573 aa23.64■■□□□ 1.38
RXRB-203ENST00000481441 SCN7AQ01118 1682 aa23.63■■□□□ 1.37
RXRB-203ENST00000481441 HMOX1P09601 288 aa23.62■■□□□ 1.37
RXRB-203ENST00000481441 MTHFSDQ2M296 383 aaKnown RBP23.62■■□□□ 1.37
RXRB-203ENST00000481441 ERFEQ4G0M1 354 aa23.62■■□□□ 1.37
RXRB-203ENST00000481441 ZNF622Q969S3 477 aaKnown RBP eCLIP23.62■■□□□ 1.375e-6■■■□□ 17.1
RXRB-203ENST00000481441 A0A087WZG4 1122 aa23.61■■□□□ 1.37
RXRB-203ENST00000481441 C21orf2O43822 256 aa23.61■■□□□ 1.37
RXRB-203ENST00000481441 TBC1D9BQ66K14 1250 aa23.61■■□□□ 1.37
RXRB-203ENST00000481441 BRIP1Q9BX63 1249 aa23.61■■□□□ 1.37
RXRB-203ENST00000481441 PDZRN3Q9UPQ7 1066 aa23.61■■□□□ 1.37
RXRB-203ENST00000481441 KNSTRNQ9Y448 316 aa23.61■■□□□ 1.37
RXRB-203ENST00000481441 PDE6BP35913 854 aa23.6■■□□□ 1.37
RXRB-203ENST00000481441 CREBZFQ9NS37 354 aa23.6■■□□□ 1.37
RXRB-203ENST00000481441 STARD3NLO95772 234 aa23.59■■□□□ 1.37
RXRB-203ENST00000481441 PRR5LQ6MZQ0 368 aa23.59■■□□□ 1.37
RXRB-203ENST00000481441 CHADLQ6NUI6 762 aa23.59■■□□□ 1.37
RXRB-203ENST00000481441 ZNF219Q9P2Y4 722 aaPredicted RBP23.59■■□□□ 1.37
RXRB-203ENST00000481441 LTBP3Q9NS15 1303 aa23.59■■□□□ 1.37
RXRB-203ENST00000481441 SLX4Q8IY92 1834 aa23.58■■□□□ 1.37
RXRB-203ENST00000481441 CACNA1SQ13698 1873 aa23.58■■□□□ 1.37
RXRB-203ENST00000481441 POTEIP0CG38 1075 aa23.58■■□□□ 1.36
RXRB-203ENST00000481441 POTEJP0CG39 1038 aa23.58■■□□□ 1.36
RXRB-203ENST00000481441 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.36
RXRB-203ENST00000481441 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.36
RXRB-203ENST00000481441 MKRN1Q9UHC7 482 aaKnown RBP23.58■■□□□ 1.36
RXRB-203ENST00000481441 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
RXRB-203ENST00000481441 TTC5Q8N0Z6 440 aa23.57■■□□□ 1.36
RXRB-203ENST00000481441 TAOK3Q9H2K8 898 aa23.57■■□□□ 1.36
RXRB-203ENST00000481441 ARFGEF2Q9Y6D5 1785 aa23.56■■□□□ 1.36
RXRB-203ENST00000481441 DDNO94850 711 aaPredicted RBP23.56■■□□□ 1.36
RXRB-203ENST00000481441 ZNF496Q96IT1 587 aaPredicted RBP23.56■■□□□ 1.36
RXRB-203ENST00000481441 TBC1D2BQ9UPU7 963 aa23.56■■□□□ 1.36
RXRB-203ENST00000481441 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
RXRB-203ENST00000481441 CLSPNQ9HAW4 1339 aa23.55■■□□□ 1.36
RXRB-203ENST00000481441 HEG1Q9ULI3 1381 aa23.54■■□□□ 1.36
RXRB-203ENST00000481441 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
RXRB-203ENST00000481441 CNKSR1Q969H4 720 aa23.53■■□□□ 1.36
RXRB-203ENST00000481441 TEX13AQ9BXU3 409 aaPredicted RBP23.53■■□□□ 1.36
RXRB-203ENST00000481441 SCN4AP35499 1836 aa23.52■■□□□ 1.36
RXRB-203ENST00000481441 CNTNAP1P78357 1384 aa23.52■■□□□ 1.36
RXRB-203ENST00000481441 STYK1Q6J9G0 422 aa23.52■■□□□ 1.36
RXRB-203ENST00000481441 ZNF790Q6PG37 636 aa23.52■■□□□ 1.36
RXRB-203ENST00000481441 ZNF330Q9Y3S2 320 aaPredicted RBP23.52■■□□□ 1.36
RXRB-203ENST00000481441 PASKQ96RG2 1323 aa23.51■■□□□ 1.35
RXRB-203ENST00000481441 FOXN1O15353 648 aa23.51■■□□□ 1.35
RXRB-203ENST00000481441 DIAPH1O60610 1272 aaKnown RBP23.51■■□□□ 1.35
RXRB-203ENST00000481441 SRGNP10124 158 aa23.51■■□□□ 1.35
RXRB-203ENST00000481441 PRPF40BQ6NWY9 871 aaKnown RBP23.51■■□□□ 1.35
RXRB-203ENST00000481441 CNBD1Q8NA66 436 aa23.51■■□□□ 1.35
RXRB-203ENST00000481441 BCORQ6W2J9 1755 aa23.51■■□□□ 1.35
RXRB-203ENST00000481441 CAMTA2O94983 1202 aa23.5■■□□□ 1.35
RXRB-203ENST00000481441 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
RXRB-203ENST00000481441 SETDB2Q96T68 719 aa23.5■■□□□ 1.35
RXRB-203ENST00000481441 SOGA3Q5TF21 947 aa23.49■■□□□ 1.35
RXRB-203ENST00000481441 L3MBTL3Q96JM7 780 aaPredicted RBP23.49■■□□□ 1.35
RXRB-203ENST00000481441 IQCA1LA6NCM1 817 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms