RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 PCDHB15Q9Y5E8 787 aa8.81□□□□□ -1
PKP4-211ENST00000481115 RALGAPBQ86X10 1494 aa8.81□□□□□ -1
PKP4-211ENST00000481115 ZNF142P52746 1687 aaPredicted RBP8.81□□□□□ -1
PKP4-211ENST00000481115 TRPM2O94759 1503 aa8.8□□□□□ -1
PKP4-211ENST00000481115 LAMC1P11047 1609 aa8.8□□□□□ -1
PKP4-211ENST00000481115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.8□□□□□ -1
PKP4-211ENST00000481115 GPR37L1O60883 481 aa8.8□□□□□ -1
PKP4-211ENST00000481115 IRX5P78411 483 aaPredicted RBP8.8□□□□□ -1
PKP4-211ENST00000481115 IRX3P78415 501 aaPredicted RBP8.8□□□□□ -1
PKP4-211ENST00000481115 KLHL40Q2TBA0 621 aa8.8□□□□□ -1
PKP4-211ENST00000481115 SULF1Q8IWU6 871 aa8.8□□□□□ -1
PKP4-211ENST00000481115 SMC5Q8IY18 1101 aa8.8□□□□□ -1
PKP4-211ENST00000481115 PMFBP1Q8TBY8 1022 aa8.8□□□□□ -1
PKP4-211ENST00000481115 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
PKP4-211ENST00000481115 PLA2R1Q13018 1463 aa8.8□□□□□ -1
PKP4-211ENST00000481115 KDM5AP29375 1690 aaKnown RBP8.79□□□□□ -1
PKP4-211ENST00000481115 TNRQ92752 1358 aa8.79□□□□□ -1
PKP4-211ENST00000481115 NDUFV2P19404 249 aa8.79□□□□□ -1
PKP4-211ENST00000481115 DNTTIP2Q5QJE6 756 aaKnown RBP8.79□□□□□ -1
PKP4-211ENST00000481115 DNAJC14Q6Y2X3 702 aaPredicted RBP8.79□□□□□ -1
PKP4-211ENST00000481115 SIRT1Q96EB6 747 aa8.79□□□□□ -1
PKP4-211ENST00000481115 EFCC1Q9HA90 598 aa8.79□□□□□ -1
PKP4-211ENST00000481115 USP47Q96K76 1375 aa8.78□□□□□ -1
PKP4-211ENST00000481115 SLC34A2O95436 690 aa8.78□□□□□ -1
PKP4-211ENST00000481115 CTR9Q6PD62 1173 aa8.78□□□□□ -1
PKP4-211ENST00000481115 CCDC125Q86Z20 511 aa8.78□□□□□ -1
PKP4-211ENST00000481115 CABLES1Q8TDN4 633 aa8.78□□□□□ -1
PKP4-211ENST00000481115 TRIM34Q9BYJ4 488 aa8.78□□□□□ -1
PKP4-211ENST00000481115 GEMIN8Q9NWZ8 242 aaKnown RBP8.78□□□□□ -1
PKP4-211ENST00000481115 CALCOCO1Q9P1Z2 691 aa8.78□□□□□ -1
PKP4-211ENST00000481115 CLTCL1P53675 1640 aa8.78□□□□□ -1
PKP4-211ENST00000481115 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
PKP4-211ENST00000481115 CEP170BQ9Y4F5 1589 aaPredicted RBP8.78□□□□□ -1
PKP4-211ENST00000481115 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1
PKP4-211ENST00000481115 UBR1Q8IWV7 1749 aa8.77□□□□□ -1
PKP4-211ENST00000481115 NPC1L1Q9UHC9 1359 aa8.77□□□□□ -1.01
PKP4-211ENST00000481115 ELOAQ14241 798 aaKnown RBP8.77□□□□□ -1.01
PKP4-211ENST00000481115 RAB3GAP1Q15042 981 aa8.77□□□□□ -1.01
PKP4-211ENST00000481115 ZNF622Q969S3 477 aaKnown RBP eCLIP8.77□□□□□ -1.015e-10■□□□□ 9.9
PKP4-211ENST00000481115 ZBTB3Q9H5J0 574 aa8.77□□□□□ -1.01
PKP4-211ENST00000481115 OGFRQ9NZT2 677 aa8.77□□□□□ -1.01
PKP4-211ENST00000481115 KIF1BO60333 1816 aa8.77□□□□□ -1.01
PKP4-211ENST00000481115 A2ML1A8K2U0 1454 aa8.77□□□□□ -1.01
PKP4-211ENST00000481115 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
PKP4-211ENST00000481115 TULP2O00295 520 aa8.76□□□□□ -1.01
PKP4-211ENST00000481115 HSCBQ8IWL3 235 aa8.76□□□□□ -1.01
PKP4-211ENST00000481115 TRMT2AQ8IZ69 625 aaKnown RBP8.76□□□□□ -1.01
PKP4-211ENST00000481115 PRR7Q8TB68 274 aa8.76□□□□□ -1.01
PKP4-211ENST00000481115 ZNF830Q96NB3 372 aaPredicted RBP8.76□□□□□ -1.01
PKP4-211ENST00000481115 NEURL4Q96JN8 1562 aa8.76□□□□□ -1.01
PKP4-211ENST00000481115 LMTK3Q96Q04 1460 aa8.76□□□□□ -1.01
PKP4-211ENST00000481115 TMEM131LA2VDJ0 1609 aa8.76□□□□□ -1.01
PKP4-211ENST00000481115 ADGRB3O60242 1522 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 ZNF16P17020 682 aaPredicted RBP8.75□□□□□ -1.01
PKP4-211ENST00000481115 SEMA3FQ13275 785 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 TIGD1Q96MW7 591 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 HMX1Q9NP08 348 aaPredicted RBP8.75□□□□□ -1.01
PKP4-211ENST00000481115 DIAPH3Q9NSV4 1193 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 SLC52A1Q9NWF4 448 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 RAD50Q92878 1312 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 ZNF521Q96K83 1311 aa8.75□□□□□ -1.01
PKP4-211ENST00000481115 RCCD1A6NED2 376 aa8.74□□□□□ -1.01
PKP4-211ENST00000481115 TPM3P06753 285 aa8.74□□□□□ -1.01
PKP4-211ENST00000481115 ARID4AP29374 1257 aaPredicted RBP8.74□□□□□ -1.01
PKP4-211ENST00000481115 KIAA2012Q0VF49 1180 aa8.74□□□□□ -1.01
PKP4-211ENST00000481115 IDI1Q13907 227 aa8.74□□□□□ -1.01
PKP4-211ENST00000481115 GAS2L3Q86XJ1 694 aa8.74□□□□□ -1.01
PKP4-211ENST00000481115 NKTRP30414 1462 aaKnown RBP8.73□□□□□ -1.01
PKP4-211ENST00000481115 ATP9BO43861 1147 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 TCF3P15923 654 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 PRSS12P56730 875 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 CTDSPL2Q05D32 466 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 IER5LQ5T953 404 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 CEP120Q8N960 986 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 DRC1Q96MC2 740 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 BCL2L13Q9BXK5 485 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 KIF16BQ96L93 1317 aa8.73□□□□□ -1.01
PKP4-211ENST00000481115 SCAF11Q99590 1463 aaKnown RBP8.72□□□□□ -1.01
PKP4-211ENST00000481115 IFT172Q9UG01 1749 aa8.72□□□□□ -1.01
PKP4-211ENST00000481115 UVSSAQ2YD98 709 aa8.72□□□□□ -1.01
PKP4-211ENST00000481115 DUSP27Q5VZP5 1158 aa8.72□□□□□ -1.01
PKP4-211ENST00000481115 ANKRD7Q92527 254 aa8.72□□□□□ -1.01
PKP4-211ENST00000481115 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
PKP4-211ENST00000481115 ARHGAP23Q9P227 1491 aa8.71□□□□□ -1.01
PKP4-211ENST00000481115 SLIT1O75093 1534 aa8.71□□□□□ -1.01
PKP4-211ENST00000481115 TMEM164Q5U3C3 297 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 PHLDB3Q6NSJ2 640 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 PIBF1Q8WXW3 757 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 C8orf37Q96NL8 207 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 C22orf23Q9BZE7 217 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 SPTLC3Q9NUV7 552 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 PLEKHH1Q9ULM0 1364 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 PPLO60437 1756 aa8.71□□□□□ -1.02
PKP4-211ENST00000481115 CTIFO43310 598 aaKnown RBP8.7□□□□□ -1.02
PKP4-211ENST00000481115 PTMAP06454 111 aaKnown RBP8.7□□□□□ -1.02
PKP4-211ENST00000481115 NUCB2P80303 420 aa8.7□□□□□ -1.02
PKP4-211ENST00000481115 FAM184AQ8NB25 1140 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms