RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SIX5Q8N196 739 aa11.53□□□□□ -0.56
CBX3-206ENST00000481057 LARGE2Q8N3Y3 721 aa11.53□□□□□ -0.56
CBX3-206ENST00000481057 ZNF594Q96JF6 807 aaPredicted RBP11.53□□□□□ -0.56
CBX3-206ENST00000481057 ARHGEF10LQ9HCE6 1279 aa11.53□□□□□ -0.56
CBX3-206ENST00000481057 ATG7O95352 703 aa11.52□□□□□ -0.57
CBX3-206ENST00000481057 STAU1O95793 577 aaKnown RBP11.52□□□□□ -0.57
CBX3-206ENST00000481057 SCNN1DP51172 638 aa11.52□□□□□ -0.57
CBX3-206ENST00000481057 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.57
CBX3-206ENST00000481057 DKK1O94907 266 aa11.51□□□□□ -0.57
CBX3-206ENST00000481057 RAPGEF3O95398 923 aa11.51□□□□□ -0.57
CBX3-206ENST00000481057 TPCN2Q8NHX9 752 aa11.51□□□□□ -0.57
CBX3-206ENST00000481057 ETNK1Q9HBU6 452 aa11.51□□□□□ -0.57
CBX3-206ENST00000481057 RAB6BQ9NRW1 208 aa11.51□□□□□ -0.57
CBX3-206ENST00000481057 ZNF335Q9H4Z2 1342 aaPredicted RBP11.51□□□□□ -0.57
CBX3-206ENST00000481057 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
CBX3-206ENST00000481057 TMEM229AB2RXF0 380 aa11.5□□□□□ -0.57
CBX3-206ENST00000481057 WASLO00401 505 aaPredicted RBP11.5□□□□□ -0.57
CBX3-206ENST00000481057 LCE2BO14633 110 aa11.5□□□□□ -0.57
CBX3-206ENST00000481057 UPP2O95045 317 aa11.5□□□□□ -0.57
CBX3-206ENST00000481057 GDF10P55107 478 aa11.5□□□□□ -0.57
CBX3-206ENST00000481057 CCDC102BQ68D86 513 aa11.5□□□□□ -0.57
CBX3-206ENST00000481057 ZNF395Q9H8N7 513 aaPredicted RBP11.5□□□□□ -0.57
CBX3-206ENST00000481057 A0A1W2PRU2 124 aa11.49□□□□□ -0.57
CBX3-206ENST00000481057 SPINT1O43278 529 aa11.49□□□□□ -0.57
CBX3-206ENST00000481057 ELOAQ14241 798 aaKnown RBP11.49□□□□□ -0.57
CBX3-206ENST00000481057 ESCO1Q5FWF5 840 aa11.49□□□□□ -0.57
CBX3-206ENST00000481057 ATP13A2Q9NQ11 1180 aa11.49□□□□□ -0.57
CBX3-206ENST00000481057 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
CBX3-206ENST00000481057 TOM1O60784 492 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 IL2RAP01589 272 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 BMP2P12643 396 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 CLN3Q13286 438 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 C6orf118Q5T5N4 469 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 ANKMY2Q8IV38 441 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 PURBQ96QR8 312 aaKnown RBP11.48□□□□□ -0.57
CBX3-206ENST00000481057 ARXQ96QS3 562 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
CBX3-206ENST00000481057 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
CBX3-206ENST00000481057 UHRF1BP1Q6BDS2 1440 aa11.47□□□□□ -0.57
CBX3-206ENST00000481057 INHAP05111 366 aa11.47□□□□□ -0.57
CBX3-206ENST00000481057 DPYDQ12882 1025 aa11.47□□□□□ -0.57
CBX3-206ENST00000481057 SCARF1Q14162 830 aa11.47□□□□□ -0.57
CBX3-206ENST00000481057 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.46□□□□□ -0.57
CBX3-206ENST00000481057 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
CBX3-206ENST00000481057 XAGE2Q96GT9 111 aa11.46□□□□□ -0.57
CBX3-206ENST00000481057 INSM2Q96T92 566 aaPredicted RBP11.46□□□□□ -0.57
CBX3-206ENST00000481057 ZNF358Q9NW07 568 aa11.46□□□□□ -0.57
CBX3-206ENST00000481057 HRH3Q9Y5N1 445 aa11.46□□□□□ -0.57
CBX3-206ENST00000481057 WDR7Q9Y4E6 1490 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 POGZQ7Z3K3 1410 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 UACAQ9BZF9 1416 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 MEN1O00255 615 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 CEBPAP49715 358 aaPredicted RBP11.45□□□□□ -0.58
CBX3-206ENST00000481057 ZFP42Q96MM3 310 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 ESYT1Q9BSJ8 1104 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
CBX3-206ENST00000481057 SFI1A8K8P3 1242 aa11.44□□□□□ -0.58
CBX3-206ENST00000481057 SEC13P55735 322 aa11.44□□□□□ -0.58
CBX3-206ENST00000481057 STK32AQ8WU08 396 aa11.44□□□□□ -0.58
CBX3-206ENST00000481057 RBM19Q9Y4C8 960 aaKnown RBP11.44□□□□□ -0.58
CBX3-206ENST00000481057 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
CBX3-206ENST00000481057 M0R2N6 131 aa11.43□□□□□ -0.58
CBX3-206ENST00000481057 CTSOP43234 321 aaPredicted RBP11.43□□□□□ -0.58
CBX3-206ENST00000481057 MLECQ14165 292 aa11.43□□□□□ -0.58
CBX3-206ENST00000481057 FOXD4L5Q5VV16 416 aaPredicted RBP11.43□□□□□ -0.58
CBX3-206ENST00000481057 NLRP3Q96P20 1036 aa11.43□□□□□ -0.58
CBX3-206ENST00000481057 POLMQ9NP87 494 aaPredicted RBP11.43□□□□□ -0.58
CBX3-206ENST00000481057 SERTAD1Q9UHV2 236 aa11.43□□□□□ -0.58
CBX3-206ENST00000481057 ZCCHC11Q5TAX3 1644 aaKnown RBP11.42□□□□□ -0.58
CBX3-206ENST00000481057 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
CBX3-206ENST00000481057 BACH1O14867 736 aa11.42□□□□□ -0.58
CBX3-206ENST00000481057 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
CBX3-206ENST00000481057 SLC4A9Q96Q91 983 aa11.42□□□□□ -0.58
CBX3-206ENST00000481057 GPC1P35052 558 aa11.41□□□□□ -0.58
CBX3-206ENST00000481057 TMEM164Q5U3C3 297 aa11.41□□□□□ -0.58
CBX3-206ENST00000481057 FHDC1Q9C0D6 1143 aaPredicted RBP11.41□□□□□ -0.58
CBX3-206ENST00000481057 SOS2Q07890 1332 aaPredicted RBP11.4□□□□□ -0.58
CBX3-206ENST00000481057 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
CBX3-206ENST00000481057 CENPCQ03188 943 aa11.4□□□□□ -0.58
CBX3-206ENST00000481057 TLR1Q15399 786 aa11.4□□□□□ -0.58
CBX3-206ENST00000481057 FER1L4A9Z1Z3 1794 aa11.4□□□□□ -0.58
CBX3-206ENST00000481057 TTLL8A6PVC2 850 aa11.39□□□□□ -0.59
CBX3-206ENST00000481057 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
CBX3-206ENST00000481057 SMTNP53814 917 aa11.39□□□□□ -0.59
CBX3-206ENST00000481057 EPHA4P54764 986 aa11.39□□□□□ -0.59
CBX3-206ENST00000481057 MTFR1Q15390 333 aa11.39□□□□□ -0.59
CBX3-206ENST00000481057 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
CBX3-206ENST00000481057 RNF217Q8TC41 542 aa11.39□□□□□ -0.59
CBX3-206ENST00000481057 FANCAO15360 1455 aa11.38□□□□□ -0.59
CBX3-206ENST00000481057 NCOA1Q15788 1441 aa11.38□□□□□ -0.59
CBX3-206ENST00000481057 RETREG2Q8NC44 543 aa11.38□□□□□ -0.59
CBX3-206ENST00000481057 SENP2Q9HC62 589 aa11.38□□□□□ -0.59
CBX3-206ENST00000481057 GMPR2Q9P2T1 348 aaKnown RBP11.38□□□□□ -0.59
CBX3-206ENST00000481057 A6NJY4 79 aa11.37□□□□□ -0.59
CBX3-206ENST00000481057 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
CBX3-206ENST00000481057 GRIP2Q9C0E4 1043 aa11.37□□□□□ -0.59
CBX3-206ENST00000481057 PHLDB1Q86UU1 1377 aa11.37□□□□□ -0.59
CBX3-206ENST00000481057 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms