RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 INTS5Q6P9B9 1019 aaKnown RBP19.75■□□□□ 0.75
ABCF3-213ENST00000480539 CFAP44Q96MT7 982 aa19.75■□□□□ 0.75
ABCF3-213ENST00000480539 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
ABCF3-213ENST00000480539 BABAM1Q9NWV8 329 aa19.75■□□□□ 0.75
ABCF3-213ENST00000480539 STARD3NLO95772 234 aa19.74■□□□□ 0.75
ABCF3-213ENST00000480539 COL23A1Q86Y22 540 aaPredicted RBP19.74■□□□□ 0.75
ABCF3-213ENST00000480539 MBIPQ9NS73 344 aa19.74■□□□□ 0.75
ABCF3-213ENST00000480539 RTCBQ9Y3I0 505 aaKnown RBP19.74■□□□□ 0.75
ABCF3-213ENST00000480539 LRP5O75197 1615 aa19.73■□□□□ 0.75
ABCF3-213ENST00000480539 GNAI1P63096 354 aa19.73■□□□□ 0.75
ABCF3-213ENST00000480539 KRT24Q2M2I5 525 aa19.73■□□□□ 0.75
ABCF3-213ENST00000480539 NCBP3Q53F19 620 aaKnown RBP19.73■□□□□ 0.75
ABCF3-213ENST00000480539 TEX13AQ9BXU3 409 aaPredicted RBP19.73■□□□□ 0.75
ABCF3-213ENST00000480539 USP16Q9Y5T5 823 aa19.73■□□□□ 0.75
ABCF3-213ENST00000480539 RPS6KA4O75676 772 aa19.72■□□□□ 0.75
ABCF3-213ENST00000480539 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
ABCF3-213ENST00000480539 CANXP27824 592 aaKnown RBP19.72■□□□□ 0.75
ABCF3-213ENST00000480539 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
ABCF3-213ENST00000480539 SOS1Q07889 1333 aaPredicted RBP19.72■□□□□ 0.75
ABCF3-213ENST00000480539 COL15A1P39059 1388 aa19.71■□□□□ 0.75
ABCF3-213ENST00000480539 GIGYF1O75420 1035 aaPredicted RBP19.71■□□□□ 0.75
ABCF3-213ENST00000480539 FLAD1Q8NFF5 587 aa19.71■□□□□ 0.75
ABCF3-213ENST00000480539 TSR2Q969E8 191 aaKnown RBP19.71■□□□□ 0.75
ABCF3-213ENST00000480539 A1BGP04217 495 aa19.7■□□□□ 0.74
ABCF3-213ENST00000480539 MSL1Q68DK7 614 aa19.7■□□□□ 0.74
ABCF3-213ENST00000480539 ZNF330Q9Y3S2 320 aaPredicted RBP19.7■□□□□ 0.74
ABCF3-213ENST00000480539 NGEFQ8N5V2 710 aa19.69■□□□□ 0.74
ABCF3-213ENST00000480539 MTFR1LQ9H019 292 aa19.69■□□□□ 0.74
ABCF3-213ENST00000480539 ATF5Q9Y2D1 282 aaPredicted RBP19.69■□□□□ 0.74
ABCF3-213ENST00000480539 IL16Q14005 1332 aa19.69■□□□□ 0.74
ABCF3-213ENST00000480539 ADRA2BP18089 450 aa19.68■□□□□ 0.74
ABCF3-213ENST00000480539 TRAPPC3LQ5T215 181 aa19.68■□□□□ 0.74
ABCF3-213ENST00000480539 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
ABCF3-213ENST00000480539 ZNF521Q96K83 1311 aa19.68■□□□□ 0.74
ABCF3-213ENST00000480539 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
ABCF3-213ENST00000480539 SRP68Q9UHB9 627 aaKnown RBP19.67■□□□□ 0.74
ABCF3-213ENST00000480539 SCN7AQ01118 1682 aa19.67■□□□□ 0.74
ABCF3-213ENST00000480539 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
ABCF3-213ENST00000480539 RFC4P35249 363 aa19.66■□□□□ 0.74
ABCF3-213ENST00000480539 SLC16A10Q8TF71 515 aa19.66■□□□□ 0.74
ABCF3-213ENST00000480539 NECTIN2Q92692 538 aa19.66■□□□□ 0.74
ABCF3-213ENST00000480539 SPON1Q9HCB6 807 aa19.66■□□□□ 0.74
ABCF3-213ENST00000480539 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
ABCF3-213ENST00000480539 COL24A1Q17RW2 1714 aa19.65■□□□□ 0.74
ABCF3-213ENST00000480539 EIF2S2P20042 333 aaKnown RBP19.65■□□□□ 0.74
ABCF3-213ENST00000480539 USP42Q9H9J4 1324 aaKnown RBP19.65■□□□□ 0.74
ABCF3-213ENST00000480539 NBPF26B4DH59 902 aa19.64■□□□□ 0.73
ABCF3-213ENST00000480539 EIF5P55010 431 aaKnown RBP19.64■□□□□ 0.73
ABCF3-213ENST00000480539 DUSP27Q5VZP5 1158 aa19.64■□□□□ 0.73
ABCF3-213ENST00000480539 NBPF10Q6P3W6 841 aaKnown RBP19.64■□□□□ 0.73
ABCF3-213ENST00000480539 NBPF15Q8N660 670 aa19.64■□□□□ 0.73
ABCF3-213ENST00000480539 BCORQ6W2J9 1755 aa19.64■□□□□ 0.73
ABCF3-213ENST00000480539 ELL2O00472 640 aaPredicted RBP19.63■□□□□ 0.73
ABCF3-213ENST00000480539 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
ABCF3-213ENST00000480539 PTGER2P43116 358 aa19.63■□□□□ 0.73
ABCF3-213ENST00000480539 HOXB7P09629 217 aa19.62■□□□□ 0.73
ABCF3-213ENST00000480539 MYL6BP14649 208 aa19.62■□□□□ 0.73
ABCF3-213ENST00000480539 HNRNPUQ00839 825 aaKnown RBP eCLIP19.62■□□□□ 0.73
ABCF3-213ENST00000480539 HDGFL1Q5TGJ6 251 aa19.62■□□□□ 0.73
ABCF3-213ENST00000480539 C8orf58Q8NAV2 365 aa19.62■□□□□ 0.73
ABCF3-213ENST00000480539 GYS1P13807 737 aa19.61■□□□□ 0.73
ABCF3-213ENST00000480539 USPL1Q5W0Q7 1092 aa19.61■□□□□ 0.73
ABCF3-213ENST00000480539 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
ABCF3-213ENST00000480539 TSPYL6Q8N831 410 aa19.61■□□□□ 0.73
ABCF3-213ENST00000480539 ARXQ96QS3 562 aa19.61■□□□□ 0.73
ABCF3-213ENST00000480539 SGIP1Q9BQI5 828 aa19.61■□□□□ 0.73
ABCF3-213ENST00000480539 ERBB4Q15303 1308 aa19.6■□□□□ 0.73
ABCF3-213ENST00000480539 A0A087WZG4 1122 aa19.6■□□□□ 0.73
ABCF3-213ENST00000480539 ZPR1O75312 459 aa19.6■□□□□ 0.73
ABCF3-213ENST00000480539 ANXA1P04083 346 aa19.6■□□□□ 0.73
ABCF3-213ENST00000480539 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
ABCF3-213ENST00000480539 MYH16Q9H6N6 1097 aa19.6■□□□□ 0.73
ABCF3-213ENST00000480539 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
ABCF3-213ENST00000480539 POLD1P28340 1107 aa19.59■□□□□ 0.73
ABCF3-213ENST00000480539 GOLGA2Q08379 1002 aa19.59■□□□□ 0.73
ABCF3-213ENST00000480539 DZIP3Q86Y13 1208 aaKnown RBP19.59■□□□□ 0.73
ABCF3-213ENST00000480539 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
ABCF3-213ENST00000480539 NARFQ9UHQ1 456 aa19.59■□□□□ 0.73
ABCF3-213ENST00000480539 FKBP8Q14318 412 aa19.58■□□□□ 0.72
ABCF3-213ENST00000480539 PDIA6Q15084 440 aa19.58■□□□□ 0.72
ABCF3-213ENST00000480539 PPP1R1BQ9UD71 204 aaPredicted RBP19.58■□□□□ 0.72
ABCF3-213ENST00000480539 SRCAPQ6ZRS2 3230 aa19.57■□□□□ 0.72
ABCF3-213ENST00000480539 CAMTA2O94983 1202 aa19.57■□□□□ 0.72
ABCF3-213ENST00000480539 EXOSC9Q06265 439 aaKnown RBP19.57■□□□□ 0.72
ABCF3-213ENST00000480539 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
ABCF3-213ENST00000480539 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
ABCF3-213ENST00000480539 E9PSI1 815 aa19.56■□□□□ 0.72
ABCF3-213ENST00000480539 MMP10P09238 476 aa19.56■□□□□ 0.72
ABCF3-213ENST00000480539 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
ABCF3-213ENST00000480539 TTLL7Q6ZT98 887 aa19.55■□□□□ 0.72
ABCF3-213ENST00000480539 LRP10Q7Z4F1 713 aa19.55■□□□□ 0.72
ABCF3-213ENST00000480539 SLFN5Q08AF3 891 aa19.54■□□□□ 0.72
ABCF3-213ENST00000480539 NLGN1Q8N2Q7 840 aa19.54■□□□□ 0.72
ABCF3-213ENST00000480539 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
ABCF3-213ENST00000480539 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
ABCF3-213ENST00000480539 KIF6Q6ZMV9 814 aa19.53■□□□□ 0.72
ABCF3-213ENST00000480539 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
ABCF3-213ENST00000480539 DDR1Q08345 913 aa19.52■□□□□ 0.72
ABCF3-213ENST00000480539 AIMP1Q12904 312 aaKnown RBP19.52■□□□□ 0.72
ABCF3-213ENST00000480539 BICDL1Q6ZP65 573 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms