RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 COL15A1P39059 1388 aa20.32■□□□□ 0.84
CDK9-203ENST00000480353 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
CDK9-203ENST00000480353 HEG1Q9ULI3 1381 aa20.32■□□□□ 0.84
CDK9-203ENST00000480353 HTATSF1O43719 755 aaKnown RBP20.31■□□□□ 0.84
CDK9-203ENST00000480353 YBX3P16989 372 aaKnown RBP eCLIP20.31■□□□□ 0.84
CDK9-203ENST00000480353 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
CDK9-203ENST00000480353 DLG5Q8TDM6 1919 aa20.3■□□□□ 0.84
CDK9-203ENST00000480353 A0A087WZG4 1122 aa20.3■□□□□ 0.84
CDK9-203ENST00000480353 USPL1Q5W0Q7 1092 aa20.3■□□□□ 0.84
CDK9-203ENST00000480353 DCTN1Q14203 1278 aa20.29■□□□□ 0.84
CDK9-203ENST00000480353 FKBP8Q14318 412 aa20.29■□□□□ 0.84
CDK9-203ENST00000480353 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
CDK9-203ENST00000480353 KIF13BQ9NQT8 1826 aa20.28■□□□□ 0.84
CDK9-203ENST00000480353 TGFB2P61812 414 aa20.28■□□□□ 0.84
CDK9-203ENST00000480353 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
CDK9-203ENST00000480353 N4BP2Q86UW6 1770 aaPredicted RBP20.28■□□□□ 0.84
CDK9-203ENST00000480353 NFE2L2Q16236 605 aa20.26■□□□□ 0.83
CDK9-203ENST00000480353 ZNF784Q8NCA9 323 aaPredicted RBP20.26■□□□□ 0.83
CDK9-203ENST00000480353 C10orf71Q711Q0 1435 aa20.26■□□□□ 0.83
CDK9-203ENST00000480353 KCNQ3O43525 872 aa20.25■□□□□ 0.83
CDK9-203ENST00000480353 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
CDK9-203ENST00000480353 A0A0G2JLW4 131 aa20.24■□□□□ 0.83
CDK9-203ENST00000480353 WDR43Q15061 677 aaKnown RBP eCLIP20.24■□□□□ 0.83
CDK9-203ENST00000480353 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
CDK9-203ENST00000480353 BCS1LQ9Y276 419 aa20.24■□□□□ 0.83
CDK9-203ENST00000480353 SNRPA1P09661 255 aaKnown RBP20.23■□□□□ 0.83
CDK9-203ENST00000480353 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
CDK9-203ENST00000480353 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
CDK9-203ENST00000480353 IL6STP40189 918 aaPredicted RBP20.22■□□□□ 0.83
CDK9-203ENST00000480353 EIF5P55010 431 aaKnown RBP20.22■□□□□ 0.83
CDK9-203ENST00000480353 DDR1Q08345 913 aa20.22■□□□□ 0.83
CDK9-203ENST00000480353 BICDL1Q6ZP65 573 aa20.22■□□□□ 0.83
CDK9-203ENST00000480353 POLRMTO00411 1230 aaKnown RBP20.21■□□□□ 0.83
CDK9-203ENST00000480353 NPHP1O15259 732 aa20.21■□□□□ 0.83
CDK9-203ENST00000480353 A1BGP04217 495 aa20.21■□□□□ 0.83
CDK9-203ENST00000480353 DPEP1P16444 411 aa20.21■□□□□ 0.83
CDK9-203ENST00000480353 UTRNP46939 3433 aa20.2■□□□□ 0.82
CDK9-203ENST00000480353 TM4SF1P30408 202 aa20.2■□□□□ 0.82
CDK9-203ENST00000480353 NFIXQ14938 502 aa20.2■□□□□ 0.82
CDK9-203ENST00000480353 MIS18AQ9NYP9 233 aa20.2■□□□□ 0.82
CDK9-203ENST00000480353 TBC1D2BQ9UPU7 963 aa20.2■□□□□ 0.82
CDK9-203ENST00000480353 AFDNP55196 1824 aaKnown RBP20.2■□□□□ 0.82
CDK9-203ENST00000480353 RIPK4P57078 832 aa20.19■□□□□ 0.82
CDK9-203ENST00000480353 LMOD3Q0VAK6 560 aa20.19■□□□□ 0.82
CDK9-203ENST00000480353 PIM2Q9P1W9 311 aa20.19■□□□□ 0.82
CDK9-203ENST00000480353 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
CDK9-203ENST00000480353 KIAA1551Q9HCM1 1747 aa20.19■□□□□ 0.82
CDK9-203ENST00000480353 SERPINB2P05120 415 aa20.18■□□□□ 0.82
CDK9-203ENST00000480353 SCN7AQ01118 1682 aa20.17■□□□□ 0.82
CDK9-203ENST00000480353 DZIP3Q86Y13 1208 aaKnown RBP20.17■□□□□ 0.82
CDK9-203ENST00000480353 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
CDK9-203ENST00000480353 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
CDK9-203ENST00000480353 ARHGAP27Q6ZUM4 889 aa20.16■□□□□ 0.82
CDK9-203ENST00000480353 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
CDK9-203ENST00000480353 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
CDK9-203ENST00000480353 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
CDK9-203ENST00000480353 GOLGB1Q14789 3259 aaKnown RBP20.16■□□□□ 0.82
CDK9-203ENST00000480353 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
CDK9-203ENST00000480353 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
CDK9-203ENST00000480353 BRCA1P38398 1863 aaKnown RBP20.16■□□□□ 0.82
CDK9-203ENST00000480353 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
CDK9-203ENST00000480353 DALRD3Q5D0E6 543 aaKnown RBP20.15■□□□□ 0.82
CDK9-203ENST00000480353 SETDB2Q96T68 719 aa20.15■□□□□ 0.82
CDK9-203ENST00000480353 PRKRIP1Q9H875 184 aaPredicted RBP20.15■□□□□ 0.82
CDK9-203ENST00000480353 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
CDK9-203ENST00000480353 TBC1D9BQ66K14 1250 aa20.14■□□□□ 0.81
CDK9-203ENST00000480353 TSPYL4Q9UJ04 414 aa20.14■□□□□ 0.81
CDK9-203ENST00000480353 ARFGEF1Q9Y6D6 1849 aa20.13■□□□□ 0.81
CDK9-203ENST00000480353 CARMIL3Q8ND23 1372 aa20.13■□□□□ 0.81
CDK9-203ENST00000480353 GIGYF1O75420 1035 aaPredicted RBP20.13■□□□□ 0.81
CDK9-203ENST00000480353 CHRNA5P30532 468 aa20.13■□□□□ 0.81
CDK9-203ENST00000480353 TMPOP42166 694 aaKnown RBP20.13■□□□□ 0.81
CDK9-203ENST00000480353 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
CDK9-203ENST00000480353 BCORQ6W2J9 1755 aa20.13■□□□□ 0.81
CDK9-203ENST00000480353 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
CDK9-203ENST00000480353 NRXN2Q9P2S2 1712 aa20.12■□□□□ 0.81
CDK9-203ENST00000480353 H0YIN7 160 aa20.11■□□□□ 0.81
CDK9-203ENST00000480353 CAMTA2O94983 1202 aa20.11■□□□□ 0.81
CDK9-203ENST00000480353 C2CD5Q86YS7 1000 aa20.11■□□□□ 0.81
CDK9-203ENST00000480353 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
CDK9-203ENST00000480353 ATP10DQ9P241 1426 aa20.1■□□□□ 0.81
CDK9-203ENST00000480353 KCNA3P22001 575 aa20.1■□□□□ 0.81
CDK9-203ENST00000480353 EIF4A1P60842 406 aaKnown RBP20.1■□□□□ 0.81
CDK9-203ENST00000480353 ST5P78524 1137 aa20.1■□□□□ 0.81
CDK9-203ENST00000480353 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
CDK9-203ENST00000480353 ZNF526Q8TF50 670 aaPredicted RBP20.1■□□□□ 0.81
CDK9-203ENST00000480353 GPBP1L1Q9HC44 474 aaPredicted RBP20.1■□□□□ 0.81
CDK9-203ENST00000480353 PDE6BP35913 854 aa20.09■□□□□ 0.81
CDK9-203ENST00000480353 CLEC4GQ6UXB4 293 aa20.09■□□□□ 0.81
CDK9-203ENST00000480353 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
CDK9-203ENST00000480353 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.81
CDK9-203ENST00000480353 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
CDK9-203ENST00000480353 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
CDK9-203ENST00000480353 MYL6BP14649 208 aa20.07■□□□□ 0.8
CDK9-203ENST00000480353 NBPF5PQ86XG9 351 aaPredicted RBP20.07■□□□□ 0.8
CDK9-203ENST00000480353 ZNF622Q969S3 477 aaKnown RBP eCLIP20.07■□□□□ 0.8
CDK9-203ENST00000480353 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
CDK9-203ENST00000480353 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
CDK9-203ENST00000480353 PRR5LQ6MZQ0 368 aa20.06■□□□□ 0.8
CDK9-203ENST00000480353 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms