RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, human

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2-208	ENST00000479815	USP35	Q9P2H5	1018 aa		11.23	□□□□□ -0.61
HMGN2-208	ENST00000479815	HEG1	Q9ULI3	1381 aa		11.23	□□□□□ -0.61
HMGN2-208	ENST00000479815	PAPPA	Q13219	1627 aa		11.23	□□□□□ -0.61
HMGN2-208	ENST00000479815	BRPF1	P55201	1214 aa	Predicted RBP	11.22	□□□□□ -0.61
HMGN2-208	ENST00000479815	EXOSC9	Q06265	439 aa	Known RBP	11.22	□□□□□ -0.61
HMGN2-208	ENST00000479815	TEF	Q10587	303 aa		11.22	□□□□□ -0.61
HMGN2-208	ENST00000479815	GJD4	Q96KN9	370 aa	Predicted RBP	11.22	□□□□□ -0.61
HMGN2-208	ENST00000479815	EXOC5	O00471	708 aa		11.21	□□□□□ -0.61
HMGN2-208	ENST00000479815	HOXB7	P09629	217 aa		11.21	□□□□□ -0.61
HMGN2-208	ENST00000479815	DDB1	Q16531	1140 aa		11.21	□□□□□ -0.61
HMGN2-208	ENST00000479815	TSPYL4	Q9UJ04	414 aa		11.21	□□□□□ -0.61
HMGN2-208	ENST00000479815	UBR2	Q8IWV8	1755 aa		11.21	□□□□□ -0.62
HMGN2-208	ENST00000479815	RARS	P54136	660 aa	Known RBP	11.2	□□□□□ -0.62
HMGN2-208	ENST00000479815	ALDH1L2	Q3SY69	923 aa		11.2	□□□□□ -0.62
HMGN2-208	ENST00000479815	ZNF772	Q68DY9	489 aa	Predicted RBP	11.2	□□□□□ -0.62
HMGN2-208	ENST00000479815	CACNA1F	O60840	1977 aa		11.19	□□□□□ -0.62
HMGN2-208	ENST00000479815	VAMP4	O75379	141 aa		11.19	□□□□□ -0.62
HMGN2-208	ENST00000479815	FAM98C	Q17RN3	349 aa	Known RBP	11.19	□□□□□ -0.62
HMGN2-208	ENST00000479815	CCDC9	Q9Y3X0	531 aa	Known RBP	11.19	□□□□□ -0.62
HMGN2-208	ENST00000479815	LAS1L	Q9Y4W2	734 aa	Known RBP	11.19	□□□□□ -0.62
HMGN2-208	ENST00000479815	ITGB4	P16144	1822 aa		11.19	□□□□□ -0.62
HMGN2-208	ENST00000479815	BTBD11	A6QL63	1104 aa		11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	PYGB	P11216	843 aa		11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	RRP1	P56182	461 aa	Known RBP	11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	EIF4A1	P60842	406 aa	Known RBP	11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	TWISTNB	Q3B726	338 aa	Predicted RBP	11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	TSPYL6	Q8N831	410 aa		11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	MARCH10	Q8NA82	808 aa	Predicted RBP	11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	C8orf58	Q8NAV2	365 aa		11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	DDX54	Q8TDD1	881 aa	Known RBP	11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	DOT1L	Q8TEK3	1739 aa		11.18	□□□□□ -0.62
HMGN2-208	ENST00000479815	DCAF8	Q5TAQ9	597 aa		11.17	□□□□□ -0.62
HMGN2-208	ENST00000479815	ZNF790	Q6PG37	636 aa		11.17	□□□□□ -0.62
HMGN2-208	ENST00000479815	CHMP4A	Q9BY43	222 aa		11.17	□□□□□ -0.62
HMGN2-208	ENST00000479815	KCP	Q6ZWJ8	1503 aa		11.17	□□□□□ -0.62
HMGN2-208	ENST00000479815	CIC	Q96RK0	1608 aa	Predicted RBP	11.17	□□□□□ -0.62
HMGN2-208	ENST00000479815	PLCG2	P16885	1265 aa		11.16	□□□□□ -0.62
HMGN2-208	ENST00000479815	CABP4	P57796	275 aa		11.16	□□□□□ -0.62
HMGN2-208	ENST00000479815	NFATC2IP	Q8NCF5	419 aa		11.16	□□□□□ -0.62
HMGN2-208	ENST00000479815	SSH1	Q8WYL5	1049 aa		11.16	□□□□□ -0.62
HMGN2-208	ENST00000479815	QTRT2	Q9H974	415 aa	Known RBP	11.16	□□□□□ -0.62
HMGN2-208	ENST00000479815	MIS18A	Q9NYP9	233 aa		11.16	□□□□□ -0.62
HMGN2-208	ENST00000479815	KIF16B	Q96L93	1317 aa		11.15	□□□□□ -0.62
HMGN2-208	ENST00000479815	RBM6	P78332	1123 aa	Known RBP	11.15	□□□□□ -0.62
HMGN2-208	ENST00000479815	IRX5	P78411	483 aa	Predicted RBP	11.15	□□□□□ -0.62
HMGN2-208	ENST00000479815	KRT24	Q2M2I5	525 aa		11.15	□□□□□ -0.62
HMGN2-208	ENST00000479815	SLAIN1	Q8ND83	568 aa		11.15	□□□□□ -0.62
HMGN2-208	ENST00000479815	NHS	Q6T4R5	1651 aa		11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	LAMB4	A4D0S4	1761 aa		11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	KCNQ3	O43525	872 aa		11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	GIGYF1	O75420	1035 aa	Predicted RBP	11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	BCAR3	O75815	825 aa		11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	ERICH6B	Q5W0A0	696 aa		11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	PIGB	Q92521	554 aa		11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	TMOD3	Q9NYL9	352 aa		11.14	□□□□□ -0.63
HMGN2-208	ENST00000479815	PDE3A	Q14432	1141 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	SEPT12	Q8IYM1	358 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	MRPL50	Q8N5N7	158 aa	Known RBP	11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	ARHGAP45	Q92619	1136 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	ZNF496	Q96IT1	587 aa	Predicted RBP	11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	FMNL2	Q96PY5	1086 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	SMC4	Q9NTJ3	1288 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	PCDHB8	Q9UN66	801 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	C5	P01031	1676 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	ZNF831	Q5JPB2	1677 aa		11.13	□□□□□ -0.63
HMGN2-208	ENST00000479815	KAT6B	Q8WYB5	2073 aa		11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	NEFL	P07196	543 aa		11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	SLC39A6	Q13433	755 aa		11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	CCDC30	Q5VVM6	783 aa		11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	TTC5	Q8N0Z6	440 aa		11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	VSIG10	Q8N0Z9	540 aa		11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	RGS17	Q9UGC6	210 aa	Predicted RBP	11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	SBF2	Q86WG5	1849 aa		11.12	□□□□□ -0.63
HMGN2-208	ENST00000479815	ERBB4	Q15303	1308 aa		11.11	□□□□□ -0.63
HMGN2-208	ENST00000479815	RGS12	O14924	1447 aa		11.11	□□□□□ -0.63
HMGN2-208	ENST00000479815	ELL2	O00472	640 aa	Predicted RBP	11.11	□□□□□ -0.63
HMGN2-208	ENST00000479815	SNRPA1	P09661	255 aa	Known RBP	11.11	□□□□□ -0.63
HMGN2-208	ENST00000479815	FBXO3	Q9UK99	471 aa		11.11	□□□□□ -0.63
HMGN2-208	ENST00000479815	BRWD3	Q6RI45	1802 aa		11.11	□□□□□ -0.63
HMGN2-208	ENST00000479815	IPO8	O15397	1037 aa	Known RBP	11.1	□□□□□ -0.63
HMGN2-208	ENST00000479815	MS4A1	P11836	297 aa		11.1	□□□□□ -0.63
HMGN2-208	ENST00000479815	PRIM1	P49642	420 aa	Known RBP	11.1	□□□□□ -0.63
HMGN2-208	ENST00000479815	HDGFL1	Q5TGJ6	251 aa		11.1	□□□□□ -0.63
HMGN2-208	ENST00000479815	ZKSCAN2	Q63HK3	967 aa		11.1	□□□□□ -0.63
HMGN2-208	ENST00000479815	BCL2L13	Q9BXK5	485 aa		11.1	□□□□□ -0.63
HMGN2-208	ENST00000479815	ATG3	Q9NT62	314 aa		11.1	□□□□□ -0.63
HMGN2-208	ENST00000479815	PTPRC	P08575	1304 aa		11.09	□□□□□ -0.63
HMGN2-208	ENST00000479815	TRIM27	P14373	513 aa		11.09	□□□□□ -0.63
HMGN2-208	ENST00000479815	ATF7IP	Q6VMQ6	1270 aa		11.09	□□□□□ -0.63
HMGN2-208	ENST00000479815	STK31	Q9BXU1	1019 aa		11.09	□□□□□ -0.63
HMGN2-208	ENST00000479815	ASAP1	Q9ULH1	1129 aa		11.09	□□□□□ -0.63
HMGN2-208	ENST00000479815	ABCC4	O15439	1325 aa		11.09	□□□□□ -0.63
HMGN2-208	ENST00000479815	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.08	□□□□□ -0.64
HMGN2-208	ENST00000479815	PXDNL	A1KZ92	1463 aa		11.08	□□□□□ -0.64
HMGN2-208	ENST00000479815	BTAF1	O14981	1849 aa		11.08	□□□□□ -0.64
HMGN2-208	ENST00000479815	ST18	O60284	1047 aa		11.08	□□□□□ -0.64
HMGN2-208	ENST00000479815	RXRB	P28702	533 aa		11.08	□□□□□ -0.64
HMGN2-208	ENST00000479815	SMARCC1	Q92922	1105 aa	Predicted RBP	11.08	□□□□□ -0.64

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