RNA–Protein interactions for RNA: ENST00000479490.1

SFT2D1-203, Transcript of SFT2 domain containing 1, humanhuman

TSL 1 (best)

Gene SFT2D1, Length 2,061 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-203ENST00000479490 EPB41L2O43491 1005 aaKnown RBP13.91□□□□□ -0.18
SFT2D1-203ENST00000479490 BRD1O95696 1058 aa13.91□□□□□ -0.18
SFT2D1-203ENST00000479490 MSNP26038 577 aaKnown RBP13.91□□□□□ -0.18
SFT2D1-203ENST00000479490 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
SFT2D1-203ENST00000479490 PALD1Q9ULE6 856 aa13.91□□□□□ -0.18
SFT2D1-203ENST00000479490 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
SFT2D1-203ENST00000479490 HS1BP3Q53T59 392 aa13.9□□□□□ -0.18
SFT2D1-203ENST00000479490 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
SFT2D1-203ENST00000479490 SLAIN2Q9P270 581 aa13.9□□□□□ -0.18
SFT2D1-203ENST00000479490 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
SFT2D1-203ENST00000479490 KIF1AQ12756 1690 aa13.9□□□□□ -0.18
SFT2D1-203ENST00000479490 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
SFT2D1-203ENST00000479490 LRSAM1Q6UWE0 723 aa13.89□□□□□ -0.19
SFT2D1-203ENST00000479490 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
SFT2D1-203ENST00000479490 HDGFL1Q5TGJ6 251 aa13.89□□□□□ -0.19
SFT2D1-203ENST00000479490 IL17REQ8NFR9 667 aa13.89□□□□□ -0.19
SFT2D1-203ENST00000479490 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
SFT2D1-203ENST00000479490 TMEM63CQ9P1W3 806 aa13.89□□□□□ -0.19
SFT2D1-203ENST00000479490 MARF1Q9Y4F3 1742 aaKnown RBP13.88□□□□□ -0.19
SFT2D1-203ENST00000479490 CACNA1FO60840 1977 aa13.88□□□□□ -0.19
SFT2D1-203ENST00000479490 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
SFT2D1-203ENST00000479490 SSH3Q8TE77 659 aa13.88□□□□□ -0.19
SFT2D1-203ENST00000479490 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
SFT2D1-203ENST00000479490 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
SFT2D1-203ENST00000479490 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
SFT2D1-203ENST00000479490 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
SFT2D1-203ENST00000479490 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
SFT2D1-203ENST00000479490 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
SFT2D1-203ENST00000479490 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
SFT2D1-203ENST00000479490 SYCE3A1L190 88 aa13.86□□□□□ -0.19
SFT2D1-203ENST00000479490 TPM2P07951 284 aa13.86□□□□□ -0.19
SFT2D1-203ENST00000479490 CHAMP1Q96JM3 812 aa13.86□□□□□ -0.19
SFT2D1-203ENST00000479490 HSPA4P34932 840 aa13.86□□□□□ -0.19
SFT2D1-203ENST00000479490 POLA2Q14181 598 aa13.86□□□□□ -0.19
SFT2D1-203ENST00000479490 SYAP1Q96A49 352 aaPredicted RBP13.86□□□□□ -0.19
SFT2D1-203ENST00000479490 SURF6O75683 361 aaKnown RBP13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 NUTM2GQ5VZR2 741 aa13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 LTV1Q96GA3 475 aaPredicted RBP13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 UPF3BQ9BZI7 483 aaKnown RBP13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 PHAXQ9H814 394 aaKnown RBP13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 MED1Q15648 1581 aaPredicted RBP13.85□□□□□ -0.19
SFT2D1-203ENST00000479490 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 ABTB2Q8N961 1025 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 KIF1BPQ96EK5 621 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 RAD50Q92878 1312 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 CEMIPQ8WUJ3 1361 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 PSME1Q06323 249 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 CERKQ8TCT0 537 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 RHPN1Q8TCX5 695 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 NOL7Q9UMY1 257 aaKnown RBP13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
SFT2D1-203ENST00000479490 HOXB7P09629 217 aa13.83□□□□□ -0.2
SFT2D1-203ENST00000479490 PI4K2BQ8TCG2 481 aa13.83□□□□□ -0.2
SFT2D1-203ENST00000479490 IL25Q9H293 177 aa13.83□□□□□ -0.2
SFT2D1-203ENST00000479490 SRGAP3O43295 1099 aa13.83□□□□□ -0.2
SFT2D1-203ENST00000479490 RRP9O43818 475 aaKnown RBP13.83□□□□□ -0.2
SFT2D1-203ENST00000479490 OFD1O75665 1012 aa13.83□□□□□ -0.2
SFT2D1-203ENST00000479490 PHF14O94880 888 aa13.83□□□□□ -0.2
SFT2D1-203ENST00000479490 SGSM2O43147 1006 aa13.82□□□□□ -0.2
SFT2D1-203ENST00000479490 TOM1O60784 492 aa13.82□□□□□ -0.2
SFT2D1-203ENST00000479490 HSP90AB4PQ58FF6 505 aa13.82□□□□□ -0.2
SFT2D1-203ENST00000479490 KIAA1211Q6ZU35 1233 aa13.82□□□□□ -0.2
SFT2D1-203ENST00000479490 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
SFT2D1-203ENST00000479490 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 EIF2S2P20042 333 aaKnown RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 DDX17Q92841 729 aaKnown RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 LTN1O94822 1766 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 PXDNQ92626 1479 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 ROBO1Q9Y6N7 1651 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 ZNF500O60304 480 aaPredicted RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 KRT28Q7Z3Y7 464 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 CCDC39Q9UFE4 941 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 CRYBG1Q9Y4K1 1723 aa13.81□□□□□ -0.2
SFT2D1-203ENST00000479490 BEND3Q5T5X7 828 aa13.8□□□□□ -0.2
SFT2D1-203ENST00000479490 CHPF2Q9P2E5 772 aa13.8□□□□□ -0.2
SFT2D1-203ENST00000479490 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
SFT2D1-203ENST00000479490 RPAP1Q9BWH6 1393 aaPredicted RBP13.8□□□□□ -0.2
SFT2D1-203ENST00000479490 NBPF7P0C2Y1 421 aaPredicted RBP13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 MCM5P33992 734 aa13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 LSG1Q9H089 658 aaKnown RBP13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 ZKSCAN5Q9Y2L8 839 aa13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 TTC41PQ6P2S7 1318 aa13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 USP42Q9H9J4 1324 aaKnown RBP13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 NHSL1Q5SYE7 1610 aa13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
SFT2D1-203ENST00000479490 TERF1P54274 439 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms