RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 SMARCA2P51531 1590 aa6.96□□□□□ -1.29
RPL39-203ENST00000477403 PDS5BQ9NTI5 1447 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 SLURP2P0DP57 97 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 NBPF1Q3BBV0 1214 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 TBCELQ5QJ74 424 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 ZNF385CQ66K41 422 aaPredicted RBP6.96□□□□□ -1.3
RPL39-203ENST00000477403 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 PPP1R12CQ9BZL4 782 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
RPL39-203ENST00000477403 RBM19Q9Y4C8 960 aaKnown RBP6.96□□□□□ -1.3
RPL39-203ENST00000477403 NESP48681 1621 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
RPL39-203ENST00000477403 MX2P20592 715 aa6.95□□□□□ -1.3
RPL39-203ENST00000477403 ATP4AP20648 1035 aa6.95□□□□□ -1.3
RPL39-203ENST00000477403 RASA1P20936 1047 aa6.95□□□□□ -1.3
RPL39-203ENST00000477403 LBRQ14739 615 aaKnown RBP6.95□□□□□ -1.3
RPL39-203ENST00000477403 LARGE2Q8N3Y3 721 aa6.95□□□□□ -1.3
RPL39-203ENST00000477403 CRISPLD1Q9H336 500 aa6.95□□□□□ -1.3
RPL39-203ENST00000477403 IGF1RP08069 1367 aa6.95□□□□□ -1.3
RPL39-203ENST00000477403 SFI1A8K8P3 1242 aa6.94□□□□□ -1.3
RPL39-203ENST00000477403 TATP17735 454 aaPredicted RBP6.94□□□□□ -1.3
RPL39-203ENST00000477403 LMOD1P29536 600 aaPredicted RBP6.94□□□□□ -1.3
RPL39-203ENST00000477403 ARSJQ5FYB0 599 aaPredicted RBP6.94□□□□□ -1.3
RPL39-203ENST00000477403 SLC9A9Q8IVB4 645 aa6.94□□□□□ -1.3
RPL39-203ENST00000477403 ZNF295-AS1Q8N0V1 137 aa6.94□□□□□ -1.3
RPL39-203ENST00000477403 C1orf216Q8TAB5 229 aa6.94□□□□□ -1.3
RPL39-203ENST00000477403 PHF24Q9UPV7 400 aa6.94□□□□□ -1.3
RPL39-203ENST00000477403 EPHA4P54764 986 aa6.93□□□□□ -1.3
RPL39-203ENST00000477403 UBAP2LQ14157 1087 aaKnown RBP6.93□□□□□ -1.3
RPL39-203ENST00000477403 LARP1Q6PKG0 1096 aaKnown RBP6.93□□□□□ -1.3
RPL39-203ENST00000477403 LYPD4Q6UWN0 246 aa6.93□□□□□ -1.3
RPL39-203ENST00000477403 SIX5Q8N196 739 aa6.93□□□□□ -1.3
RPL39-203ENST00000477403 CFHR5Q9BXR6 569 aa6.93□□□□□ -1.3
RPL39-203ENST00000477403 ZNF232Q9UNY5 417 aa6.93□□□□□ -1.3
RPL39-203ENST00000477403 NSFL1CQ9UNZ2 370 aaKnown RBP6.93□□□□□ -1.3
RPL39-203ENST00000477403 NOS2P35228 1153 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 TXLNAP40222 546 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 FOXK2Q01167 660 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 MAP3K10Q02779 954 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 BICDL1Q6ZP65 573 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 TSEN2Q8NCE0 465 aaKnown RBP6.92□□□□□ -1.3
RPL39-203ENST00000477403 ZDHHC1Q8WTX9 485 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 L3MBTL2Q969R5 705 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
RPL39-203ENST00000477403 ZDHHC3Q9NYG2 299 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 GJA3Q9Y6H8 435 aa6.92□□□□□ -1.3
RPL39-203ENST00000477403 A0A1W2PNR3 127 aa6.91□□□□□ -1.3
RPL39-203ENST00000477403 CELA2BP08218 269 aaPredicted RBP6.91□□□□□ -1.3
RPL39-203ENST00000477403 TEAD4Q15561 434 aa6.91□□□□□ -1.3
RPL39-203ENST00000477403 CRTC2Q53ET0 693 aaPredicted RBP6.91□□□□□ -1.3
RPL39-203ENST00000477403 FIGNL1Q6PIW4 674 aa6.91□□□□□ -1.3
RPL39-203ENST00000477403 ZCCHC2Q9C0B9 1178 aaKnown RBP6.91□□□□□ -1.3
RPL39-203ENST00000477403 VRTNQ9H8Y1 702 aa6.91□□□□□ -1.3
RPL39-203ENST00000477403 ATXN7L1Q9ULK2 861 aaPredicted RBP6.91□□□□□ -1.3
RPL39-203ENST00000477403 GTF3C3Q9Y5Q9 886 aa6.91□□□□□ -1.3
RPL39-203ENST00000477403 BAZ1BQ9UIG0 1483 aaKnown RBP6.91□□□□□ -1.3
RPL39-203ENST00000477403 LAMC3Q9Y6N6 1575 aa6.91□□□□□ -1.3
RPL39-203ENST00000477403 SERTM1A2A2V5 107 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 M0R2N6 131 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 BNIP3LO60238 219 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 DKK1O94907 266 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 SEC13P55735 322 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 KANK4Q5T7N3 995 aaPredicted RBP6.9□□□□□ -1.3
RPL39-203ENST00000477403 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 NLRP8Q86W28 1048 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 ZIC5Q96T25 663 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 ZMYND15Q9H091 742 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 CHMP3Q9Y3E7 222 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 PCDHGC4Q9Y5F7 938 aa6.9□□□□□ -1.3
RPL39-203ENST00000477403 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L21D6R901 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
RPL39-203ENST00000477403 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 FGFR3P22607 806 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 RFX1P22670 979 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 MAP2K3P46734 347 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 PSMA6P60900 246 aaKnown RBP6.89□□□□□ -1.31
RPL39-203ENST00000477403 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 PTK7Q13308 1070 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 CFAP70Q5T0N1 1121 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 ACDQ96AP0 544 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 CADPSQ9ULU8 1353 aa6.89□□□□□ -1.31
RPL39-203ENST00000477403 THOC2Q8NI27 1593 aaKnown RBP6.89□□□□□ -1.31
RPL39-203ENST00000477403 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
RPL39-203ENST00000477403 LGR5O75473 907 aa6.88□□□□□ -1.31
RPL39-203ENST00000477403 BCRP11274 1271 aa6.88□□□□□ -1.31
RPL39-203ENST00000477403 BMP4P12644 408 aa6.88□□□□□ -1.31
RPL39-203ENST00000477403 DPYDQ12882 1025 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms