RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MTFR1LQ9H019 292 aa10.13□□□□□ -0.79
BRCA1-214ENST00000477152 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
BRCA1-214ENST00000477152 CASZ1Q86V15 1759 aa10.13□□□□□ -0.79
BRCA1-214ENST00000477152 AMPHP49418 695 aa10.12□□□□□ -0.79
BRCA1-214ENST00000477152 TMF1P82094 1093 aa10.12□□□□□ -0.79
BRCA1-214ENST00000477152 SLC27A3Q5K4L6 730 aa10.12□□□□□ -0.79
BRCA1-214ENST00000477152 EPAS1Q99814 870 aa10.12□□□□□ -0.79
BRCA1-214ENST00000477152 A0A1W2PP64 1363 aa10.11□□□□□ -0.79
BRCA1-214ENST00000477152 SMG6Q86US8 1419 aaKnown RBP10.11□□□□□ -0.79
BRCA1-214ENST00000477152 CD163L1Q9NR16 1453 aa10.11□□□□□ -0.79
BRCA1-214ENST00000477152 ZBTB7AO95365 584 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 ZNF454Q8N9F8 522 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 SLC16A10Q8TF71 515 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 ACSBG1Q96GR2 724 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 PHOX2BQ99453 314 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
BRCA1-214ENST00000477152 CGNL1Q0VF96 1302 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 BTAF1O14981 1849 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 POLD1P28340 1107 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 FOSBP53539 338 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 TYW1BQ6NUM6 668 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 GPR153Q6NV75 609 aa10.1□□□□□ -0.79
BRCA1-214ENST00000477152 AMHR2Q16671 573 aa10.09□□□□□ -0.79
BRCA1-214ENST00000477152 DDX54Q8TDD1 881 aaKnown RBP10.09□□□□□ -0.79
BRCA1-214ENST00000477152 NLRP7Q8WX94 980 aa10.09□□□□□ -0.79
BRCA1-214ENST00000477152 RTL1A6NKG5 1358 aa10.09□□□□□ -0.79
BRCA1-214ENST00000477152 ANKRD36BQ8N2N9 1353 aa10.09□□□□□ -0.79
BRCA1-214ENST00000477152 ST20-MTHFSA0A0A6YYL1 179 aa10.08□□□□□ -0.8
BRCA1-214ENST00000477152 LTV1Q96GA3 475 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-214ENST00000477152 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-214ENST00000477152 PTF1AQ7RTS3 328 aa10.08□□□□□ -0.8
BRCA1-214ENST00000477152 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
BRCA1-214ENST00000477152 HOXC9P31274 260 aa10.07□□□□□ -0.8
BRCA1-214ENST00000477152 ZCRB1Q8TBF4 217 aaKnown RBP10.07□□□□□ -0.8
BRCA1-214ENST00000477152 RAPGEF4Q8WZA2 1011 aa10.07□□□□□ -0.8
BRCA1-214ENST00000477152 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-214ENST00000477152 ARXQ96QS3 562 aa10.07□□□□□ -0.8
BRCA1-214ENST00000477152 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
BRCA1-214ENST00000477152 MYOM1P52179 1685 aa10.07□□□□□ -0.8
BRCA1-214ENST00000477152 CHD4Q14839 1912 aa10.07□□□□□ -0.8
BRCA1-214ENST00000477152 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
BRCA1-214ENST00000477152 C6orf132Q5T0Z8 1188 aa10.06□□□□□ -0.8
BRCA1-214ENST00000477152 SRCAPQ6ZRS2 3230 aa10.06□□□□□ -0.8
BRCA1-214ENST00000477152 SYT17Q9BSW7 474 aa10.06□□□□□ -0.8
BRCA1-214ENST00000477152 FHDC1Q9C0D6 1143 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-214ENST00000477152 KIF24Q5T7B8 1368 aa10.06□□□□□ -0.8
BRCA1-214ENST00000477152 TATP17735 454 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-214ENST00000477152 TESK2Q96S53 571 aa10.05□□□□□ -0.8
BRCA1-214ENST00000477152 TFCP2L1Q9NZI6 479 aa10.05□□□□□ -0.8
BRCA1-214ENST00000477152 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
BRCA1-214ENST00000477152 MAP3K5Q99683 1374 aa10.05□□□□□ -0.8
BRCA1-214ENST00000477152 TRIM26Q12899 539 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-214ENST00000477152 FBXW7Q969H0 707 aa10.05□□□□□ -0.8
BRCA1-214ENST00000477152 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
BRCA1-214ENST00000477152 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
BRCA1-214ENST00000477152 USP47Q96K76 1375 aa10.04□□□□□ -0.8
BRCA1-214ENST00000477152 KIF20BQ96Q89 1820 aa10.04□□□□□ -0.8
BRCA1-214ENST00000477152 PAPPAQ13219 1627 aa10.04□□□□□ -0.8
BRCA1-214ENST00000477152 FLAD1Q8NFF5 587 aa10.04□□□□□ -0.8
BRCA1-214ENST00000477152 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
BRCA1-214ENST00000477152 MS4A1P11836 297 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 PADI6Q6TGC4 694 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 GIGYF2Q6Y7W6 1299 aaKnown RBP10.03□□□□□ -0.8
BRCA1-214ENST00000477152 DOT1LQ8TEK3 1739 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 GPR162Q16538 588 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 CCNL1Q9UK58 526 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-214ENST00000477152 LY75O60449 1722 aa10.03□□□□□ -0.8
BRCA1-214ENST00000477152 FLT4P35916 1363 aa10.02□□□□□ -0.81
BRCA1-214ENST00000477152 PDGFDQ9GZP0 370 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-214ENST00000477152 RGPD2P0DJD1 1756 aa10.02□□□□□ -0.81
BRCA1-214ENST00000477152 INSRP06213 1382 aa10.01□□□□□ -0.81
BRCA1-214ENST00000477152 FYB1O15117 783 aa10.01□□□□□ -0.81
BRCA1-214ENST00000477152 MDM2Q00987 491 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-214ENST00000477152 SMARCC1Q92922 1105 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-214ENST00000477152 GGNBP2Q9H3C7 697 aa10.01□□□□□ -0.81
BRCA1-214ENST00000477152 ZNF827Q17R98 1081 aa10.01□□□□□ -0.81
BRCA1-214ENST00000477152 LRRC4BQ9NT99 713 aa10.01□□□□□ -0.81
BRCA1-214ENST00000477152 NSD3Q9BZ95 1437 aa10□□□□□ -0.81
BRCA1-214ENST00000477152 GRIN3BO60391 1043 aa10□□□□□ -0.81
BRCA1-214ENST00000477152 RRS1Q15050 365 aaKnown RBP10□□□□□ -0.81
BRCA1-214ENST00000477152 SPG7Q9UQ90 795 aa10□□□□□ -0.81
BRCA1-214ENST00000477152 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
BRCA1-214ENST00000477152 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
BRCA1-214ENST00000477152 COL9A1P20849 921 aa9.99□□□□□ -0.81
BRCA1-214ENST00000477152 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
BRCA1-214ENST00000477152 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
BRCA1-214ENST00000477152 COL24A1Q17RW2 1714 aa9.99□□□□□ -0.81
BRCA1-214ENST00000477152 NSD2O96028 1365 aa9.98□□□□□ -0.81
BRCA1-214ENST00000477152 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
BRCA1-214ENST00000477152 SHANK3Q9BYB0 1731 aa9.98□□□□□ -0.81
BRCA1-214ENST00000477152 METTL3Q86U44 580 aaKnown RBP9.98□□□□□ -0.81
BRCA1-214ENST00000477152 MEGF6O75095 1541 aa9.98□□□□□ -0.81
BRCA1-214ENST00000477152 ZNF784Q8NCA9 323 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-214ENST00000477152 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
BRCA1-214ENST00000477152 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
BRCA1-214ENST00000477152 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
BRCA1-214ENST00000477152 ADGRG1Q9Y653 693 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms