RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 DICER1Q9UPY3 1922 aaKnown RBP21.52■■□□□ 1.04
SMG5-204ENST00000476954 VEGFBP49765 207 aa21.51■■□□□ 1.03
SMG5-204ENST00000476954 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
SMG5-204ENST00000476954 USPL1Q5W0Q7 1092 aa21.5■■□□□ 1.03
SMG5-204ENST00000476954 NRXN2Q9P2S2 1712 aa21.49■■□□□ 1.03
SMG5-204ENST00000476954 TTLL6Q8N841 843 aa21.49■■□□□ 1.03
SMG5-204ENST00000476954 DPY19L2Q6NUT2 758 aa21.48■■□□□ 1.03
SMG5-204ENST00000476954 INTS5Q6P9B9 1019 aaKnown RBP21.48■■□□□ 1.03
SMG5-204ENST00000476954 WBP1LQ9NX94 342 aa21.48■■□□□ 1.03
SMG5-204ENST00000476954 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
SMG5-204ENST00000476954 CARMIL3Q8ND23 1372 aa21.48■■□□□ 1.03
SMG5-204ENST00000476954 NFIXQ14938 502 aa21.47■■□□□ 1.03
SMG5-204ENST00000476954 PASKQ96RG2 1323 aa21.47■■□□□ 1.03
SMG5-204ENST00000476954 FER1L6Q2WGJ9 1857 aa21.46■■□□□ 1.03
SMG5-204ENST00000476954 HSPA8P11142 646 aaKnown RBP21.46■■□□□ 1.03
SMG5-204ENST00000476954 CABP4P57796 275 aa21.46■■□□□ 1.03
SMG5-204ENST00000476954 C2CD5Q86YS7 1000 aa21.46■■□□□ 1.03
SMG5-204ENST00000476954 ZNF219Q9P2Y4 722 aaPredicted RBP21.46■■□□□ 1.03
SMG5-204ENST00000476954 DDNO94850 711 aaPredicted RBP21.45■■□□□ 1.02
SMG5-204ENST00000476954 MLLT1Q03111 559 aaPredicted RBP21.45■■□□□ 1.02
SMG5-204ENST00000476954 CARD14Q9BXL6 1004 aa21.45■■□□□ 1.02
SMG5-204ENST00000476954 ERFEQ4G0M1 354 aa21.44■■□□□ 1.02
SMG5-204ENST00000476954 ZPR1O75312 459 aa21.43■■□□□ 1.02
SMG5-204ENST00000476954 ANKRD31Q8N7Z5 1873 aa21.43■■□□□ 1.02
SMG5-204ENST00000476954 CCDC85CA6NKD9 419 aa21.42■■□□□ 1.02
SMG5-204ENST00000476954 SERPINB2P05120 415 aa21.42■■□□□ 1.02
SMG5-204ENST00000476954 EIF4A2Q14240 407 aaKnown RBP21.42■■□□□ 1.02
SMG5-204ENST00000476954 BCL2L12Q9HB09 334 aa21.41■■□□□ 1.02
SMG5-204ENST00000476954 SOS1Q07889 1333 aaPredicted RBP21.4■■□□□ 1.02
SMG5-204ENST00000476954 TMEM88BA6NKF7 163 aa21.4■■□□□ 1.02
SMG5-204ENST00000476954 C21orf2O43822 256 aa21.4■■□□□ 1.02
SMG5-204ENST00000476954 HSP90AB1P08238 724 aaKnown RBP21.4■■□□□ 1.02
SMG5-204ENST00000476954 ZNF530Q6P9A1 599 aaPredicted RBP21.4■■□□□ 1.02
SMG5-204ENST00000476954 DNAJC10Q8IXB1 793 aa21.4■■□□□ 1.02
SMG5-204ENST00000476954 NFATC2IPQ8NCF5 419 aa21.4■■□□□ 1.02
SMG5-204ENST00000476954 COL11A2P13942 1736 aaPredicted RBP21.4■■□□□ 1.02
SMG5-204ENST00000476954 H0YIN7 160 aa21.39■■□□□ 1.01
SMG5-204ENST00000476954 ITGBL1O95965 494 aaPredicted RBP21.39■■□□□ 1.01
SMG5-204ENST00000476954 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
SMG5-204ENST00000476954 RGS19P49795 217 aa21.38■■□□□ 1.01
SMG5-204ENST00000476954 CACNA1SQ13698 1873 aa21.38■■□□□ 1.01
SMG5-204ENST00000476954 LDHDQ86WU2 507 aa21.37■■□□□ 1.01
SMG5-204ENST00000476954 ZNF622Q969S3 477 aaKnown RBP eCLIP21.37■■□□□ 1.01
SMG5-204ENST00000476954 NARFQ9UHQ1 456 aa21.37■■□□□ 1.01
SMG5-204ENST00000476954 MTHFSP49914 203 aa21.36■■□□□ 1.01
SMG5-204ENST00000476954 PLEKHO1Q53GL0 409 aaPredicted RBP21.36■■□□□ 1.01
SMG5-204ENST00000476954 SCN4AP35499 1836 aa21.36■■□□□ 1.01
SMG5-204ENST00000476954 BICDL1Q6ZP65 573 aa21.35■■□□□ 1.01
SMG5-204ENST00000476954 CCDC24Q8N4L8 307 aa21.35■■□□□ 1.01
SMG5-204ENST00000476954 TAF1DQ9H5J8 278 aaPredicted RBP21.35■■□□□ 1.01
SMG5-204ENST00000476954 COL15A1P39059 1388 aa21.35■■□□□ 1.01
SMG5-204ENST00000476954 SLX4Q8IY92 1834 aa21.34■■□□□ 1.01
SMG5-204ENST00000476954 PDE4DIPQ5VU43 2346 aa21.33■■□□□ 1.01
SMG5-204ENST00000476954 DEFB115Q30KQ5 88 aa21.33■■□□□ 1.01
SMG5-204ENST00000476954 EAPPQ56P03 285 aaPredicted RBP21.33■■□□□ 1.01
SMG5-204ENST00000476954 TAOK3Q9H2K8 898 aa21.33■■□□□ 1.01
SMG5-204ENST00000476954 ADAMTSL1Q8N6G6 1762 aa21.33■■□□□ 1
SMG5-204ENST00000476954 SCN11AQ9UI33 1791 aa21.33■■□□□ 1
SMG5-204ENST00000476954 RASSF10A6NK89 507 aa21.32■■□□□ 1
SMG5-204ENST00000476954 CYP19A1P11511 503 aaPredicted RBP21.32■■□□□ 1
SMG5-204ENST00000476954 ZBTB1Q9Y2K1 713 aa21.32■■□□□ 1
SMG5-204ENST00000476954 WDR33Q9C0J8 1336 aaKnown RBP21.31■■□□□ 1
SMG5-204ENST00000476954 LTBP3Q9NS15 1303 aa21.31■■□□□ 1
SMG5-204ENST00000476954 SLC24A1O60721 1099 aa21.31■■□□□ 1
SMG5-204ENST00000476954 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
SMG5-204ENST00000476954 IQCA1LA6NCM1 817 aa21.3■■□□□ 1
SMG5-204ENST00000476954 AEBP1Q8IUX7 1158 aa21.3■■□□□ 1
SMG5-204ENST00000476954 CLEC11AQ9Y240 323 aa21.3■■□□□ 1
SMG5-204ENST00000476954 MAP2K1Q02750 393 aaPredicted RBP21.29■■□□□ 1
SMG5-204ENST00000476954 L3MBTL3Q96JM7 780 aaPredicted RBP21.29■■□□□ 1
SMG5-204ENST00000476954 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
SMG5-204ENST00000476954 MAP1SQ66K74 1059 aaPredicted RBP21.28■■□□□ 1
SMG5-204ENST00000476954 CFAP44Q96MT7 982 aa21.28■■□□□ 1
SMG5-204ENST00000476954 TSKSQ9UJT2 592 aa21.28■■□□□ 1
SMG5-204ENST00000476954 THSD7BQ9C0I4 1608 aa21.27■■□□□ 1
SMG5-204ENST00000476954 TNRC18O15417 2968 aaPredicted RBP21.27■■□□□ 1
SMG5-204ENST00000476954 SLC39A6Q13433 755 aa21.27■■□□□ 1
SMG5-204ENST00000476954 AMOTQ4VCS5 1084 aa21.27■■□□□ 1
SMG5-204ENST00000476954 ZNF541Q9H0D2 1346 aa21.27■□□□□ 0.99
SMG5-204ENST00000476954 TBC1D9BQ66K14 1250 aa21.26■□□□□ 0.99
SMG5-204ENST00000476954 PRR5LQ6MZQ0 368 aa21.26■□□□□ 0.99
SMG5-204ENST00000476954 ABT1Q9ULW3 272 aaKnown RBP21.26■□□□□ 0.99
SMG5-204ENST00000476954 CNTROBQ8N137 903 aa21.25■□□□□ 0.99
SMG5-204ENST00000476954 BRIP1Q9BX63 1249 aa21.25■□□□□ 0.99
SMG5-204ENST00000476954 ARFGEF2Q9Y6D5 1785 aa21.25■□□□□ 0.99
SMG5-204ENST00000476954 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
SMG5-204ENST00000476954 PDE6BP35913 854 aa21.24■□□□□ 0.99
SMG5-204ENST00000476954 FMR1Q06787 632 aaKnown RBP eCLIP21.24■□□□□ 0.99
SMG5-204ENST00000476954 CASP8AP2Q9UKL3 1982 aa21.23■□□□□ 0.99
SMG5-204ENST00000476954 EPHX2P34913 555 aa21.23■□□□□ 0.99
SMG5-204ENST00000476954 GRM1Q13255 1194 aa21.23■□□□□ 0.99
SMG5-204ENST00000476954 PRPF40BQ6NWY9 871 aaKnown RBP21.23■□□□□ 0.99
SMG5-204ENST00000476954 HACL1Q9UJ83 578 aa21.23■□□□□ 0.99
SMG5-204ENST00000476954 LGR6Q9HBX8 967 aa21.22■□□□□ 0.99
SMG5-204ENST00000476954 LTBP1Q14766 1721 aa21.21■□□□□ 0.99
SMG5-204ENST00000476954 CAPNS2Q96L46 248 aa21.21■□□□□ 0.99
SMG5-204ENST00000476954 MCOLN1Q9GZU1 580 aa21.21■□□□□ 0.99
SMG5-204ENST00000476954 RNF123Q5XPI4 1314 aa21.21■□□□□ 0.99
SMG5-204ENST00000476954 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
SMG5-204ENST00000476954 CYP4F22Q6NT55 531 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms