RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 KCPQ6ZWJ8 1503 aa20.61■□□□□ 0.89
PSMD4-211ENST00000476855 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
PSMD4-211ENST00000476855 LY75O60449 1722 aa20.6■□□□□ 0.89
PSMD4-211ENST00000476855 TUBGCP6Q96RT7 1819 aa20.6■□□□□ 0.89
PSMD4-211ENST00000476855 ZNF831Q5JPB2 1677 aa20.59■□□□□ 0.89
PSMD4-211ENST00000476855 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
PSMD4-211ENST00000476855 MSH5O43196 834 aa20.59■□□□□ 0.89
PSMD4-211ENST00000476855 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.89
PSMD4-211ENST00000476855 EXOSC9Q06265 439 aaKnown RBP20.58■□□□□ 0.89
PSMD4-211ENST00000476855 CCNL1Q9UK58 526 aaPredicted RBP20.58■□□□□ 0.89
PSMD4-211ENST00000476855 TJP1Q07157 1748 aa20.58■□□□□ 0.88
PSMD4-211ENST00000476855 KCNQ3O43525 872 aa20.57■□□□□ 0.88
PSMD4-211ENST00000476855 PIGBQ92521 554 aa20.57■□□□□ 0.88
PSMD4-211ENST00000476855 TMOD3Q9NYL9 352 aa20.57■□□□□ 0.88
PSMD4-211ENST00000476855 ATP10DQ9P241 1426 aa20.57■□□□□ 0.88
PSMD4-211ENST00000476855 HEG1Q9ULI3 1381 aa20.57■□□□□ 0.88
PSMD4-211ENST00000476855 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
PSMD4-211ENST00000476855 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
PSMD4-211ENST00000476855 SLC39A6Q13433 755 aa20.55■□□□□ 0.88
PSMD4-211ENST00000476855 KRT24Q2M2I5 525 aa20.55■□□□□ 0.88
PSMD4-211ENST00000476855 ZNF790Q6PG37 636 aa20.55■□□□□ 0.88
PSMD4-211ENST00000476855 TSPYL6Q8N831 410 aa20.54■□□□□ 0.88
PSMD4-211ENST00000476855 C8orf58Q8NAV2 365 aa20.54■□□□□ 0.88
PSMD4-211ENST00000476855 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
PSMD4-211ENST00000476855 TAF1LQ8IZX4 1826 aa20.54■□□□□ 0.88
PSMD4-211ENST00000476855 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
PSMD4-211ENST00000476855 MSL1Q68DK7 614 aa20.53■□□□□ 0.88
PSMD4-211ENST00000476855 ATG3Q9NT62 314 aa20.52■□□□□ 0.88
PSMD4-211ENST00000476855 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
PSMD4-211ENST00000476855 CT47B1P0C2W7 299 aaPredicted RBP20.51■□□□□ 0.87
PSMD4-211ENST00000476855 ASAP1Q9ULH1 1129 aa20.51■□□□□ 0.87
PSMD4-211ENST00000476855 HSPA6P17066 643 aa20.5■□□□□ 0.87
PSMD4-211ENST00000476855 TWISTNBQ3B726 338 aaPredicted RBP20.5■□□□□ 0.87
PSMD4-211ENST00000476855 ZNF496Q96IT1 587 aaPredicted RBP20.5■□□□□ 0.87
PSMD4-211ENST00000476855 VAMP4O75379 141 aa20.49■□□□□ 0.87
PSMD4-211ENST00000476855 TTC5Q8N0Z6 440 aa20.49■□□□□ 0.87
PSMD4-211ENST00000476855 SOS1Q07889 1333 aaPredicted RBP20.49■□□□□ 0.87
PSMD4-211ENST00000476855 ADCY9O60503 1353 aa20.47■□□□□ 0.87
PSMD4-211ENST00000476855 ELL2O00472 640 aaPredicted RBP20.47■□□□□ 0.87
PSMD4-211ENST00000476855 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
PSMD4-211ENST00000476855 FLAD1Q8NFF5 587 aa20.47■□□□□ 0.87
PSMD4-211ENST00000476855 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
PSMD4-211ENST00000476855 FMNL2Q96PY5 1086 aa20.47■□□□□ 0.87
PSMD4-211ENST00000476855 HOXB7P09629 217 aa20.46■□□□□ 0.87
PSMD4-211ENST00000476855 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
PSMD4-211ENST00000476855 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
PSMD4-211ENST00000476855 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
PSMD4-211ENST00000476855 PALLDQ8WX93 1383 aa20.45■□□□□ 0.86
PSMD4-211ENST00000476855 PRAMEF22A3QJZ6 481 aa20.44■□□□□ 0.86
PSMD4-211ENST00000476855 RARSP54136 660 aaKnown RBP20.44■□□□□ 0.86
PSMD4-211ENST00000476855 SMARCC1Q92922 1105 aaPredicted RBP20.43■□□□□ 0.86
PSMD4-211ENST00000476855 SLC4A9Q96Q91 983 aa20.43■□□□□ 0.86
PSMD4-211ENST00000476855 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
PSMD4-211ENST00000476855 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
PSMD4-211ENST00000476855 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
PSMD4-211ENST00000476855 VSIG10Q8N0Z9 540 aa20.42■□□□□ 0.86
PSMD4-211ENST00000476855 N4BP2Q86UW6 1770 aaPredicted RBP20.41■□□□□ 0.86
PSMD4-211ENST00000476855 SSH1Q8WYL5 1049 aa20.41■□□□□ 0.86
PSMD4-211ENST00000476855 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
PSMD4-211ENST00000476855 BCAR3O75815 825 aa20.39■□□□□ 0.85
PSMD4-211ENST00000476855 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
PSMD4-211ENST00000476855 USP16Q9Y5T5 823 aa20.39■□□□□ 0.85
PSMD4-211ENST00000476855 LOC102724428A0A0B4J2F2 783 aa20.38■□□□□ 0.85
PSMD4-211ENST00000476855 BRPF1P55201 1214 aaPredicted RBP20.38■□□□□ 0.85
PSMD4-211ENST00000476855 SIK1P57059 783 aa20.38■□□□□ 0.85
PSMD4-211ENST00000476855 HDGFL1Q5TGJ6 251 aa20.38■□□□□ 0.85
PSMD4-211ENST00000476855 AK7Q96M32 723 aa20.38■□□□□ 0.85
PSMD4-211ENST00000476855 WWC3Q9ULE0 1092 aa20.38■□□□□ 0.85
PSMD4-211ENST00000476855 C4BP0C0L5 1744 aa20.37■□□□□ 0.85
PSMD4-211ENST00000476855 TCERG1O14776 1098 aaKnown RBP20.37■□□□□ 0.85
PSMD4-211ENST00000476855 CCDC30Q5VVM6 783 aa20.37■□□□□ 0.85
PSMD4-211ENST00000476855 DNAJC10Q8IXB1 793 aa20.37■□□□□ 0.85
PSMD4-211ENST00000476855 MRPL50Q8N5N7 158 aaKnown RBP20.37■□□□□ 0.85
PSMD4-211ENST00000476855 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
PSMD4-211ENST00000476855 EIF2S2P20042 333 aaKnown RBP20.36■□□□□ 0.85
PSMD4-211ENST00000476855 AMIGO3Q86WK7 504 aa20.36■□□□□ 0.85
PSMD4-211ENST00000476855 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
PSMD4-211ENST00000476855 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
PSMD4-211ENST00000476855 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
PSMD4-211ENST00000476855 ARFGEF2Q9Y6D5 1785 aa20.36■□□□□ 0.85
PSMD4-211ENST00000476855 UBR3Q6ZT12 1888 aa20.35■□□□□ 0.85
PSMD4-211ENST00000476855 KIF3CO14782 793 aa20.35■□□□□ 0.85
PSMD4-211ENST00000476855 PHF14O94880 888 aa20.35■□□□□ 0.85
PSMD4-211ENST00000476855 TEX13AQ9BXU3 409 aaPredicted RBP20.35■□□□□ 0.85
PSMD4-211ENST00000476855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.34■□□□□ 0.85
PSMD4-211ENST00000476855 ITPK1Q13572 414 aa20.34■□□□□ 0.85
PSMD4-211ENST00000476855 CHMP4AQ9BY43 222 aa20.34■□□□□ 0.85
PSMD4-211ENST00000476855 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
PSMD4-211ENST00000476855 ERBB4Q15303 1308 aa20.33■□□□□ 0.85
PSMD4-211ENST00000476855 CYP19A1P11511 503 aaPredicted RBP20.33■□□□□ 0.85
PSMD4-211ENST00000476855 ATP6V1AP38606 617 aa20.33■□□□□ 0.85
PSMD4-211ENST00000476855 PDIA6Q15084 440 aa20.33■□□□□ 0.85
PSMD4-211ENST00000476855 SMIM5Q71RC9 77 aa20.33■□□□□ 0.85
PSMD4-211ENST00000476855 SSFA2P28290 1259 aa20.32■□□□□ 0.84
PSMD4-211ENST00000476855 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
PSMD4-211ENST00000476855 LRP10Q7Z4F1 713 aa20.32■□□□□ 0.84
PSMD4-211ENST00000476855 STK31Q9BXU1 1019 aa20.32■□□□□ 0.84
PSMD4-211ENST00000476855 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
PSMD4-211ENST00000476855 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
PSMD4-211ENST00000476855 KIF16BQ96L93 1317 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms