RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 IFT57Q9NWB7 429 aa18.77■□□□□ 0.6
CCNL1-217ENST00000476367 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
CCNL1-217ENST00000476367 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
CCNL1-217ENST00000476367 KRT24Q2M2I5 525 aa18.75■□□□□ 0.59
CCNL1-217ENST00000476367 TRMT2AQ8IZ69 625 aaKnown RBP18.75■□□□□ 0.59
CCNL1-217ENST00000476367 TSR2Q969E8 191 aaKnown RBP18.75■□□□□ 0.59
CCNL1-217ENST00000476367 BABAM1Q9NWV8 329 aa18.75■□□□□ 0.59
CCNL1-217ENST00000476367 MSH5O43196 834 aa18.74■□□□□ 0.59
CCNL1-217ENST00000476367 CYP19A1P11511 503 aaPredicted RBP18.74■□□□□ 0.59
CCNL1-217ENST00000476367 EIF4A1P60842 406 aaKnown RBP18.74■□□□□ 0.59
CCNL1-217ENST00000476367 CALD1Q05682 793 aaKnown RBP18.74■□□□□ 0.59
CCNL1-217ENST00000476367 SLFN5Q08AF3 891 aa18.74■□□□□ 0.59
CCNL1-217ENST00000476367 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
CCNL1-217ENST00000476367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.73■□□□□ 0.59
CCNL1-217ENST00000476367 SNRPA1P09661 255 aaKnown RBP18.73■□□□□ 0.59
CCNL1-217ENST00000476367 GNAI1P63096 354 aa18.73■□□□□ 0.59
CCNL1-217ENST00000476367 RC3H1Q5TC82 1133 aaKnown RBP18.73■□□□□ 0.59
CCNL1-217ENST00000476367 RTCBQ9Y3I0 505 aaKnown RBP18.73■□□□□ 0.59
CCNL1-217ENST00000476367 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
CCNL1-217ENST00000476367 ZBTB7AO95365 584 aa18.72■□□□□ 0.59
CCNL1-217ENST00000476367 STARD3NLO95772 234 aa18.72■□□□□ 0.59
CCNL1-217ENST00000476367 SSFA2P28290 1259 aa18.72■□□□□ 0.59
CCNL1-217ENST00000476367 GOLGA2Q08379 1002 aa18.72■□□□□ 0.59
CCNL1-217ENST00000476367 COL23A1Q86Y22 540 aaPredicted RBP18.72■□□□□ 0.59
CCNL1-217ENST00000476367 ZBTB1Q9Y2K1 713 aa18.72■□□□□ 0.59
CCNL1-217ENST00000476367 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
CCNL1-217ENST00000476367 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
CCNL1-217ENST00000476367 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.58
CCNL1-217ENST00000476367 USP16Q9Y5T5 823 aa18.71■□□□□ 0.58
CCNL1-217ENST00000476367 LRP5O75197 1615 aa18.7■□□□□ 0.58
CCNL1-217ENST00000476367 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
CCNL1-217ENST00000476367 RPS6KA4O75676 772 aa18.7■□□□□ 0.58
CCNL1-217ENST00000476367 CANXP27824 592 aaKnown RBP18.7■□□□□ 0.58
CCNL1-217ENST00000476367 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
CCNL1-217ENST00000476367 FLAD1Q8NFF5 587 aa18.7■□□□□ 0.58
CCNL1-217ENST00000476367 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
CCNL1-217ENST00000476367 PIP4K2AP48426 406 aaPredicted RBP18.69■□□□□ 0.58
CCNL1-217ENST00000476367 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
CCNL1-217ENST00000476367 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
CCNL1-217ENST00000476367 COL15A1P39059 1388 aa18.68■□□□□ 0.58
CCNL1-217ENST00000476367 A1BGP04217 495 aa18.68■□□□□ 0.58
CCNL1-217ENST00000476367 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
CCNL1-217ENST00000476367 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
CCNL1-217ENST00000476367 E9PSI1 815 aa18.67■□□□□ 0.58
CCNL1-217ENST00000476367 TRAPPC3LQ5T215 181 aa18.67■□□□□ 0.58
CCNL1-217ENST00000476367 MSL1Q68DK7 614 aa18.67■□□□□ 0.58
CCNL1-217ENST00000476367 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
CCNL1-217ENST00000476367 COL24A1Q17RW2 1714 aa18.66■□□□□ 0.58
CCNL1-217ENST00000476367 ADRA2BP18089 450 aa18.66■□□□□ 0.58
CCNL1-217ENST00000476367 ARHGEF1Q92888 912 aaKnown RBP18.66■□□□□ 0.58
CCNL1-217ENST00000476367 SCN7AQ01118 1682 aa18.65■□□□□ 0.58
CCNL1-217ENST00000476367 RFC4P35249 363 aa18.65■□□□□ 0.58
CCNL1-217ENST00000476367 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
CCNL1-217ENST00000476367 SPON1Q9HCB6 807 aa18.65■□□□□ 0.58
CCNL1-217ENST00000476367 EIF2S2P20042 333 aaKnown RBP18.64■□□□□ 0.57
CCNL1-217ENST00000476367 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
CCNL1-217ENST00000476367 NECTIN2Q92692 538 aa18.64■□□□□ 0.57
CCNL1-217ENST00000476367 BCORQ6W2J9 1755 aa18.64■□□□□ 0.57
CCNL1-217ENST00000476367 ELL2O00472 640 aaPredicted RBP18.63■□□□□ 0.57
CCNL1-217ENST00000476367 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
CCNL1-217ENST00000476367 SRP68Q9UHB9 627 aaKnown RBP18.63■□□□□ 0.57
CCNL1-217ENST00000476367 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
CCNL1-217ENST00000476367 IL6STP40189 918 aaPredicted RBP18.62■□□□□ 0.57
CCNL1-217ENST00000476367 EIF5P55010 431 aaKnown RBP18.62■□□□□ 0.57
CCNL1-217ENST00000476367 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
CCNL1-217ENST00000476367 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
CCNL1-217ENST00000476367 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
CCNL1-217ENST00000476367 ARXQ96QS3 562 aa18.62■□□□□ 0.57
CCNL1-217ENST00000476367 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
CCNL1-217ENST00000476367 VAMP4O75379 141 aa18.61■□□□□ 0.57
CCNL1-217ENST00000476367 MYL6BP14649 208 aa18.6■□□□□ 0.57
CCNL1-217ENST00000476367 PDIA6Q15084 440 aa18.6■□□□□ 0.57
CCNL1-217ENST00000476367 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
CCNL1-217ENST00000476367 LRP10Q7Z4F1 713 aa18.6■□□□□ 0.57
CCNL1-217ENST00000476367 ZPR1O75312 459 aa18.6■□□□□ 0.57
CCNL1-217ENST00000476367 PTGER2P43116 358 aa18.6■□□□□ 0.57
CCNL1-217ENST00000476367 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
CCNL1-217ENST00000476367 ANXA1P04083 346 aa18.59■□□□□ 0.57
CCNL1-217ENST00000476367 HOXB7P09629 217 aa18.59■□□□□ 0.57
CCNL1-217ENST00000476367 GYS1P13807 737 aa18.59■□□□□ 0.57
CCNL1-217ENST00000476367 TWISTNBQ3B726 338 aaPredicted RBP18.59■□□□□ 0.57
CCNL1-217ENST00000476367 USPL1Q5W0Q7 1092 aa18.59■□□□□ 0.57
CCNL1-217ENST00000476367 A0A087WZG4 1122 aa18.58■□□□□ 0.56
CCNL1-217ENST00000476367 POLD1P28340 1107 aa18.58■□□□□ 0.56
CCNL1-217ENST00000476367 PROSER3Q2NL68 480 aa18.58■□□□□ 0.56
CCNL1-217ENST00000476367 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
CCNL1-217ENST00000476367 PPP1R1BQ9UD71 204 aaPredicted RBP18.58■□□□□ 0.56
CCNL1-217ENST00000476367 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
CCNL1-217ENST00000476367 CACNA1FO60840 1977 aa18.58■□□□□ 0.56
CCNL1-217ENST00000476367 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
CCNL1-217ENST00000476367 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
CCNL1-217ENST00000476367 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
CCNL1-217ENST00000476367 FKBP8Q14318 412 aa18.56■□□□□ 0.56
CCNL1-217ENST00000476367 NUP98P52948 1817 aa18.55■□□□□ 0.56
CCNL1-217ENST00000476367 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
CCNL1-217ENST00000476367 MMP10P09238 476 aa18.54■□□□□ 0.56
CCNL1-217ENST00000476367 NLGN1Q8N2Q7 840 aa18.54■□□□□ 0.56
CCNL1-217ENST00000476367 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
CCNL1-217ENST00000476367 AFDNP55196 1824 aaKnown RBP18.53■□□□□ 0.56
CCNL1-217ENST00000476367 CAMTA2O94983 1202 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms