RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 PLEKHF1Q96S99 279 aa42.81■■■■■ 4.44
CHKB-207ENST00000476289 FMNL2Q96PY5 1086 aa42.8■■■■■ 4.44
CHKB-207ENST00000476289 HTATSF1O43719 755 aaKnown RBP42.79■■■■■ 4.44
CHKB-207ENST00000476289 STARD3NLO95772 234 aa42.79■■■■■ 4.44
CHKB-207ENST00000476289 WWC3Q9ULE0 1092 aa42.79■■■■■ 4.44
CHKB-207ENST00000476289 PARP3Q9Y6F1 533 aa42.79■■■■■ 4.44
CHKB-207ENST00000476289 PXDNLA1KZ92 1463 aa42.79■■■■■ 4.44
CHKB-207ENST00000476289 GRIN3BO60391 1043 aa42.78■■■■■ 4.44
CHKB-207ENST00000476289 CANXP27824 592 aaKnown RBP42.78■■■■■ 4.44
CHKB-207ENST00000476289 USPL1Q5W0Q7 1092 aa42.78■■■■■ 4.44
CHKB-207ENST00000476289 DDR1Q08345 913 aa42.77■■■■■ 4.44
CHKB-207ENST00000476289 N4BP2Q86UW6 1770 aaPredicted RBP42.76■■■■■ 4.44
CHKB-207ENST00000476289 ZPR1O75312 459 aa42.76■■■■■ 4.44
CHKB-207ENST00000476289 NEFMP07197 916 aa42.74■■■■■ 4.43
CHKB-207ENST00000476289 TEX13AQ9BXU3 409 aaPredicted RBP42.74■■■■■ 4.43
CHKB-207ENST00000476289 NARFQ9UHQ1 456 aa42.74■■■■■ 4.43
CHKB-207ENST00000476289 MYBBP1AQ9BQG0 1328 aaKnown RBP42.72■■■■■ 4.43
CHKB-207ENST00000476289 ZNF784Q8NCA9 323 aaPredicted RBP42.72■■■■■ 4.43
CHKB-207ENST00000476289 EIF5P55010 431 aaKnown RBP42.71■■■■■ 4.43
CHKB-207ENST00000476289 BCL2L12Q9HB09 334 aa42.7■■■■■ 4.43
CHKB-207ENST00000476289 TM4SF1P30408 202 aa42.69■■■■■ 4.42
CHKB-207ENST00000476289 NFE2L2Q16236 605 aa42.69■■■■■ 4.42
CHKB-207ENST00000476289 POLRMTO00411 1230 aaKnown RBP42.68■■■■■ 4.42
CHKB-207ENST00000476289 TGFB2P61812 414 aa42.68■■■■■ 4.42
CHKB-207ENST00000476289 A0A0G2JLW4 131 aa42.66■■■■■ 4.42
CHKB-207ENST00000476289 PRAMEF22A3QJZ6 481 aa42.66■■■■■ 4.42
CHKB-207ENST00000476289 A1BGP04217 495 aa42.66■■■■■ 4.42
CHKB-207ENST00000476289 MAPK8IP3Q9UPT6 1336 aa42.66■■■■■ 4.42
CHKB-207ENST00000476289 PNNQ9H307 717 aaKnown RBP42.65■■■■■ 4.42
CHKB-207ENST00000476289 NFIXQ14938 502 aa42.64■■■■■ 4.42
CHKB-207ENST00000476289 TAF7Q15545 349 aaPredicted RBP42.64■■■■■ 4.42
CHKB-207ENST00000476289 SCN7AQ01118 1682 aa42.63■■■■■ 4.42
CHKB-207ENST00000476289 DPEP1P16444 411 aa42.63■■■■■ 4.41
CHKB-207ENST00000476289 USP16Q9Y5T5 823 aa42.63■■■■■ 4.41
CHKB-207ENST00000476289 AFDNP55196 1824 aaKnown RBP42.62■■■■■ 4.41
CHKB-207ENST00000476289 BRCA1P38398 1863 aaKnown RBP42.62■■■■■ 4.41
CHKB-207ENST00000476289 THUMPD2Q9BTF0 503 aaKnown RBP42.62■■■■■ 4.41
CHKB-207ENST00000476289 MIS18AQ9NYP9 233 aa42.62■■■■■ 4.41
CHKB-207ENST00000476289 ZNF330Q9Y3S2 320 aaPredicted RBP42.62■■■■■ 4.41
CHKB-207ENST00000476289 KDM3BQ7LBC6 1761 aa42.61■■■■■ 4.41
CHKB-207ENST00000476289 IL6STP40189 918 aaPredicted RBP42.61■■■■■ 4.41
CHKB-207ENST00000476289 A0A087WZG4 1122 aa42.6■■■■■ 4.41
CHKB-207ENST00000476289 NRXN2Q9P2S2 1712 aa42.6■■■■■ 4.41
CHKB-207ENST00000476289 SNRPA1P09661 255 aaKnown RBP42.59■■■■■ 4.41
CHKB-207ENST00000476289 TBC1D2BQ9UPU7 963 aa42.57■■■■■ 4.41
CHKB-207ENST00000476289 KCNA3P22001 575 aa42.56■■■■■ 4.4
CHKB-207ENST00000476289 PIP4K2AP48426 406 aaPredicted RBP42.56■■■■■ 4.4
CHKB-207ENST00000476289 ZEB1P37275 1124 aaPredicted RBP42.55■■■■■ 4.4
CHKB-207ENST00000476289 PRKRIP1Q9H875 184 aaPredicted RBP42.55■■■■■ 4.4
CHKB-207ENST00000476289 BCS1LQ9Y276 419 aa42.53■■■■■ 4.4
CHKB-207ENST00000476289 LAMB4A4D0S4 1761 aa42.52■■■■■ 4.4
CHKB-207ENST00000476289 BCORQ6W2J9 1755 aa42.52■■■■■ 4.4
CHKB-207ENST00000476289 BICDL1Q6ZP65 573 aa42.51■■■■■ 4.4
CHKB-207ENST00000476289 SERPINB2P05120 415 aa42.5■■■■■ 4.39
CHKB-207ENST00000476289 PNISRQ8TF01 805 aaKnown RBP42.5■■■■■ 4.39
CHKB-207ENST00000476289 TBC1D9BQ66K14 1250 aa42.49■■■■■ 4.39
CHKB-207ENST00000476289 CAMTA2O94983 1202 aa42.48■■■■■ 4.39
CHKB-207ENST00000476289 CHRNA5P30532 468 aa42.48■■■■■ 4.39
CHKB-207ENST00000476289 RIPK4P57078 832 aa42.48■■■■■ 4.39
CHKB-207ENST00000476289 CCDC146Q8IYE0 955 aa42.48■■■■■ 4.39
CHKB-207ENST00000476289 NBPF26B4DH59 902 aa42.46■■■■■ 4.39
CHKB-207ENST00000476289 TMPOP42166 694 aaKnown RBP42.46■■■■■ 4.39
CHKB-207ENST00000476289 NBPF10Q6P3W6 841 aaKnown RBP42.46■■■■■ 4.39
CHKB-207ENST00000476289 NPM2Q86SE8 214 aaKnown RBP42.46■■■■■ 4.39
CHKB-207ENST00000476289 NBPF15Q8N660 670 aa42.46■■■■■ 4.39
CHKB-207ENST00000476289 CARMIL3Q8ND23 1372 aa42.45■■■■■ 4.39
CHKB-207ENST00000476289 DZIP3Q86Y13 1208 aaKnown RBP42.45■■■■■ 4.39
CHKB-207ENST00000476289 ARFGEF1Q9Y6D6 1849 aa42.45■■■■■ 4.39
CHKB-207ENST00000476289 ADCY9O60503 1353 aa42.44■■■■■ 4.38
CHKB-207ENST00000476289 EIF4A1P60842 406 aaKnown RBP42.44■■■■■ 4.38
CHKB-207ENST00000476289 WDR43Q15061 677 aaKnown RBP eCLIP42.44■■■■■ 4.38
CHKB-207ENST00000476289 PIM2Q9P1W9 311 aa42.43■■■■■ 4.38
CHKB-207ENST00000476289 RRP7AQ9Y3A4 280 aaKnown RBP42.43■■■■■ 4.38
CHKB-207ENST00000476289 ATP10DQ9P241 1426 aa42.42■■■■■ 4.38
CHKB-207ENST00000476289 GIGYF1O75420 1035 aaPredicted RBP42.41■■■■■ 4.38
CHKB-207ENST00000476289 ADAMTS8Q9UP79 889 aa42.4■■■■■ 4.38
CHKB-207ENST00000476289 DLEC1Q9Y238 1755 aa42.38■■■■■ 4.37
CHKB-207ENST00000476289 ANKRD31Q8N7Z5 1873 aa42.38■■■■■ 4.37
CHKB-207ENST00000476289 DALRD3Q5D0E6 543 aaKnown RBP42.37■■■■■ 4.37
CHKB-207ENST00000476289 RUNDC1Q96C34 613 aa42.37■■■■■ 4.37
CHKB-207ENST00000476289 LMOD3Q0VAK6 560 aa42.35■■■■■ 4.37
CHKB-207ENST00000476289 ARHGAP27Q6ZUM4 889 aa42.35■■■■■ 4.37
CHKB-207ENST00000476289 TSPYL4Q9UJ04 414 aa42.35■■■■■ 4.37
CHKB-207ENST00000476289 NEUROD2Q15784 382 aa42.34■■■■■ 4.37
CHKB-207ENST00000476289 PRR5LQ6MZQ0 368 aa42.33■■■■■ 4.37
CHKB-207ENST00000476289 SETDB2Q96T68 719 aa42.33■■■■■ 4.37
CHKB-207ENST00000476289 CCDC24Q8N4L8 307 aa42.32■■■■■ 4.37
CHKB-207ENST00000476289 C2CD5Q86YS7 1000 aa42.29■■■■■ 4.36
CHKB-207ENST00000476289 TRIM35Q9UPQ4 493 aa42.29■■■■■ 4.36
CHKB-207ENST00000476289 CLEC4GQ6UXB4 293 aa42.28■■■■■ 4.36
CHKB-207ENST00000476289 COL11A2P13942 1736 aaPredicted RBP42.28■■■■■ 4.36
CHKB-207ENST00000476289 ZNF652Q9Y2D9 606 aa42.27■■■■■ 4.36
CHKB-207ENST00000476289 CNBD1Q8NA66 436 aa42.26■■■■■ 4.36
CHKB-207ENST00000476289 BABAM1Q9NWV8 329 aa42.26■■■■■ 4.36
CHKB-207ENST00000476289 BRIP1Q9BX63 1249 aa42.25■■■■■ 4.35
CHKB-207ENST00000476289 H0YIN7 160 aa42.24■■■■■ 4.35
CHKB-207ENST00000476289 NGEFQ8N5V2 710 aa42.24■■■■■ 4.35
CHKB-207ENST00000476289 HLFQ16534 295 aa42.23■■■■■ 4.35
CHKB-207ENST00000476289 ZNF526Q8TF50 670 aaPredicted RBP42.23■■■■■ 4.35
CHKB-207ENST00000476289 RGL2O15211 777 aa42.22■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms