RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 KCNA3P22001 575 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 DDR1Q08345 913 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 TEFQ10587 303 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-208ENST00000476061 WWC3Q9ULE0 1092 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
PTPN7-208ENST00000476061 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
PTPN7-208ENST00000476061 STARD3NLO95772 234 aa13.29□□□□□ -0.28
PTPN7-208ENST00000476061 ZNF790Q6PG37 636 aa13.29□□□□□ -0.28
PTPN7-208ENST00000476061 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
PTPN7-208ENST00000476061 PIM2Q9P1W9 311 aa13.29□□□□□ -0.28
PTPN7-208ENST00000476061 HEG1Q9ULI3 1381 aa13.29□□□□□ -0.28
PTPN7-208ENST00000476061 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
PTPN7-208ENST00000476061 SBF1O95248 1867 aa13.28□□□□□ -0.28
PTPN7-208ENST00000476061 FCHSD2O94868 740 aa13.28□□□□□ -0.28
PTPN7-208ENST00000476061 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
PTPN7-208ENST00000476061 PRKAR2BP31323 418 aa13.28□□□□□ -0.28
PTPN7-208ENST00000476061 A0A087WZG4 1122 aa13.27□□□□□ -0.29
PTPN7-208ENST00000476061 EIF5P55010 431 aaKnown RBP13.27□□□□□ -0.29
PTPN7-208ENST00000476061 CNGB1Q14028 1251 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-208ENST00000476061 ZNF496Q96IT1 587 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-208ENST00000476061 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
PTPN7-208ENST00000476061 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
PTPN7-208ENST00000476061 NFIXQ14938 502 aa13.26□□□□□ -0.29
PTPN7-208ENST00000476061 DALRD3Q5D0E6 543 aaKnown RBP13.26□□□□□ -0.29
PTPN7-208ENST00000476061 ARHGAP27Q6ZUM4 889 aa13.26□□□□□ -0.29
PTPN7-208ENST00000476061 FMNL2Q96PY5 1086 aa13.26□□□□□ -0.29
PTPN7-208ENST00000476061 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
PTPN7-208ENST00000476061 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
PTPN7-208ENST00000476061 HTATSF1O43719 755 aaKnown RBP13.25□□□□□ -0.29
PTPN7-208ENST00000476061 CANXP27824 592 aaKnown RBP13.25□□□□□ -0.29
PTPN7-208ENST00000476061 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-208ENST00000476061 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
PTPN7-208ENST00000476061 SERPINB2P05120 415 aa13.24□□□□□ -0.29
PTPN7-208ENST00000476061 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
PTPN7-208ENST00000476061 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTPN7-208ENST00000476061 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
PTPN7-208ENST00000476061 KIF3CO14782 793 aa13.23□□□□□ -0.29
PTPN7-208ENST00000476061 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
PTPN7-208ENST00000476061 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
PTPN7-208ENST00000476061 CHRNA5P30532 468 aa13.22□□□□□ -0.29
PTPN7-208ENST00000476061 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
PTPN7-208ENST00000476061 LAMB4A4D0S4 1761 aa13.22□□□□□ -0.29
PTPN7-208ENST00000476061 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
PTPN7-208ENST00000476061 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.3
PTPN7-208ENST00000476061 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
PTPN7-208ENST00000476061 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
PTPN7-208ENST00000476061 HSPA6P17066 643 aa13.2□□□□□ -0.3
PTPN7-208ENST00000476061 NPM2Q86SE8 214 aaKnown RBP13.2□□□□□ -0.3
PTPN7-208ENST00000476061 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
PTPN7-208ENST00000476061 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
PTPN7-208ENST00000476061 H0YIN7 160 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 RGL2O15211 777 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 KCNQ3O43525 872 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 TOMM70O94826 608 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 A1BGP04217 495 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 NEFMP07197 916 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
PTPN7-208ENST00000476061 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
PTPN7-208ENST00000476061 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
PTPN7-208ENST00000476061 CAMTA2O94983 1202 aa13.18□□□□□ -0.3
PTPN7-208ENST00000476061 PDE6BP35913 854 aa13.18□□□□□ -0.3
PTPN7-208ENST00000476061 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-208ENST00000476061 MCM10Q7L590 875 aa13.18□□□□□ -0.3
PTPN7-208ENST00000476061 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
PTPN7-208ENST00000476061 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
PTPN7-208ENST00000476061 COL11A2P13942 1736 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-208ENST00000476061 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
PTPN7-208ENST00000476061 KDM2BQ8NHM5 1336 aa13.17□□□□□ -0.3
PTPN7-208ENST00000476061 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
PTPN7-208ENST00000476061 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
PTPN7-208ENST00000476061 DZIP3Q86Y13 1208 aaKnown RBP13.17□□□□□ -0.3
PTPN7-208ENST00000476061 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
PTPN7-208ENST00000476061 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
PTPN7-208ENST00000476061 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
PTPN7-208ENST00000476061 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
PTPN7-208ENST00000476061 PRR5LQ6MZQ0 368 aa13.16□□□□□ -0.3
PTPN7-208ENST00000476061 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
PTPN7-208ENST00000476061 PLEKHF1Q96S99 279 aa13.16□□□□□ -0.3
PTPN7-208ENST00000476061 SETDB2Q96T68 719 aa13.16□□□□□ -0.3
PTPN7-208ENST00000476061 RNF181Q9P0P0 153 aa13.16□□□□□ -0.3
PTPN7-208ENST00000476061 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-208ENST00000476061 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
PTPN7-208ENST00000476061 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
PTPN7-208ENST00000476061 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.3
PTPN7-208ENST00000476061 NUP98P52948 1817 aa13.14□□□□□ -0.31
PTPN7-208ENST00000476061 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
PTPN7-208ENST00000476061 LMNB1P20700 586 aa13.14□□□□□ -0.31
PTPN7-208ENST00000476061 CNBD1Q8NA66 436 aa13.14□□□□□ -0.31
PTPN7-208ENST00000476061 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
PTPN7-208ENST00000476061 ST5P78524 1137 aa13.13□□□□□ -0.31
PTPN7-208ENST00000476061 RALBP1Q15311 655 aa13.13□□□□□ -0.31
PTPN7-208ENST00000476061 SLX4Q8IY92 1834 aa13.13□□□□□ -0.31
PTPN7-208ENST00000476061 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms