RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	SAMD9	Q5K651	1589 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	UACA	Q9BZF9	1416 aa		4.55	□□□□□ -1.68
LSM2-211	ENST00000475835	MTUS2	Q5JR59	1369 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	SPAG9	O60271	1321 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ERICH4	A6NGS2	130 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	PPP1R15A	O75807	674 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	PARN	O95453	639 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	IGHD	P01880	384 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	SLFN14	P0C7P3	912 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	HARS	P12081	509 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	USP8	P40818	1118 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	PRPH	P41219	470 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ZNF132	P52740	706 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	INHBE	P58166	350 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	IGBP1	P78318	339 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	EIF2B5	Q13144	721 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	PRPF4B	Q13523	1007 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	TERF2	Q15554	542 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	DNAJC21	Q5F1R6	531 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	RNF20	Q5VTR2	975 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC70	Q6NSX1	233 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	GIMAP6	Q6P9H5	292 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ANKRD13D	Q6ZTN6	518 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	STAG2	Q8N3U4	1231 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	TTC30B	Q8N4P2	665 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	PHC3	Q8NDX5	983 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC26	Q8TAB7	109 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ZC3H15	Q8WU90	426 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ZBTB9	Q96C00	473 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	CEP63	Q96MT8	703 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	IWS1	Q96ST2	819 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	CRACR2A	Q9BSW2	395 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	MAK16	Q9BXY0	300 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	UNC45A	Q9H3U1	944 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	QTRT2	Q9H974	415 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	GRPEL1	Q9HAV7	217 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	CPSF2	Q9P2I0	782 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	DKK3	Q9UBP4	350 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ACAD8	Q9UKU7	415 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	CIZ1	Q9ULV3	898 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	NOL7	Q9UMY1	257 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ZNF652	Q9Y2D9	606 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	IKBKG	Q9Y6K9	419 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	HFM1	A2PYH4	1435 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	ABCA5	Q8WWZ7	1642 aa		4.54	□□□□□ -1.68
LSM2-211	ENST00000475835	CGNL1	Q0VF96	1302 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	TRIM64C	A6NLI5	447 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	FRAT2	O75474	233 aa	Predicted RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	ERLIN1	O75477	346 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	MTA2	O94776	668 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	OAT	P04181	439 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	RASSF7	Q02833	373 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	DEUP1	Q05D60	604 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	KRT72	Q14CN4	511 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	CCDC178	Q5BJE1	867 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	MSL1	Q68DK7	614 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	RBM46	Q8TBY0	533 aa	Known RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	MIPOL1	Q8TD10	442 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	SMARCC1	Q92922	1105 aa	Predicted RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	MPP4	Q96JB8	637 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	BACH2	Q9BYV9	841 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	HOXC10	Q9NYD6	342 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	MAP3K20	Q9NYL2	800 aa	Known RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	CLIP2	Q9UDT6	1046 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	SNAPC4	Q5SXM2	1469 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	PBRM1	Q86U86	1689 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	MYOM3	Q5VTT5	1437 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	CNTLN	Q9NXG0	1405 aa		4.53	□□□□□ -1.68
LSM2-211	ENST00000475835	PIK3R4	Q99570	1358 aa		4.53	□□□□□ -1.69
LSM2-211	ENST00000475835	SBNO2	Q9Y2G9	1366 aa		4.53	□□□□□ -1.69
LSM2-211	ENST00000475835	ABCA10	Q8WWZ4	1543 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	KAT6B	Q8WYB5	2073 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	ADGB	Q8N7X0	1667 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	NCOA2	Q15596	1464 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	FANCD2	Q9BXW9	1451 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	TMEM110-MUSTN1	A8MSY1	372 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	SGSM2	O43147	1006 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	VAMP4	O75379	141 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	MTRF1	O75570	445 aa	Known RBP	4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	KRT38	O76015	456 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	ECM2	O94769	699 aa	Predicted RBP	4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	ECEL1	O95672	775 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	NAT2	P11245	290 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	TNNT1	P13805	278 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	YY1	P25490	414 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	RPS6KA3	P51812	740 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	E2F5	Q15329	346 aa		4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	SEPT7	Q16181	437 aa	Known RBP	4.52	□□□□□ -1.69
LSM2-211	ENST00000475835	ATP2B3	Q16720	1220 aa		4.52	□□□□□ -1.69

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