RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 POLR3GO15318 223 aaPredicted RBP20.58■□□□□ 0.88
LPCAT1-202ENST00000475622 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.88
LPCAT1-202ENST00000475622 TMX1Q9H3N1 280 aa20.58■□□□□ 0.88
LPCAT1-202ENST00000475622 WDR97A6NE52 1622 aa20.58■□□□□ 0.88
LPCAT1-202ENST00000475622 GOLGA6L10A0A0M3HER8 536 aa20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 RANBP6O60518 1105 aaKnown RBP20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 MCM3P25205 808 aa20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 PAFAH1B1P43034 410 aa20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 IFFO1Q0D2I5 559 aa20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 DDX19AQ9NUU7 478 aaKnown RBP20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 TMOD2Q9NZR1 351 aa20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 ZNF213O14771 459 aa20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 CGNQ9P2M7 1197 aaKnown RBP20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 GSTTP1A0A1W2PQM5 241 aa20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 CCT2P78371 535 aaKnown RBP20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
LPCAT1-202ENST00000475622 USO1O60763 962 aaKnown RBP20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 TDRD12Q587J7 1177 aaKnown RBP20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 EHBP1L1Q8N3D4 1523 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 GOLGA8BA8MQT2 603 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 YEATS4O95619 227 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 TNIP1Q15025 636 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 BIN1O00499 593 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 ANKLE2Q86XL3 938 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 ABCC11Q96J66 1382 aa20.56■□□□□ 0.88
LPCAT1-202ENST00000475622 IQCA1Q86XH1 822 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 IBSPP21815 317 aaPredicted RBP20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 KCNH5Q8NCM2 988 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 GOPCQ9HD26 462 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 CRACR2BQ8N4Y2 399 aaPredicted RBP20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 RAB34Q9BZG1 259 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 GOLGA8AA7E2F4 631 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 NEMFO60524 1076 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 FGFR1OPO95684 399 aaKnown RBP20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 SSRP1Q08945 709 aaKnown RBP20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 DNAAF4Q8WXU2 420 aa20.55■□□□□ 0.88
LPCAT1-202ENST00000475622 IFIT5Q13325 482 aaKnown RBP20.54■□□□□ 0.88
LPCAT1-202ENST00000475622 IFIT3O14879 490 aaKnown RBP20.54■□□□□ 0.88
LPCAT1-202ENST00000475622 TMC6Q7Z403 805 aa20.54■□□□□ 0.88
LPCAT1-202ENST00000475622 GIMAP7Q8NHV1 300 aa20.54■□□□□ 0.88
LPCAT1-202ENST00000475622 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
LPCAT1-202ENST00000475622 CCDC194A0A1B0GVG4 234 aa20.54■□□□□ 0.88
LPCAT1-202ENST00000475622 SF3B2Q13435 895 aaKnown RBP20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 BCCIPQ9P287 314 aaKnown RBP eCLIP20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 GJB2P29033 226 aa20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 GSDMDP57764 484 aa20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 ADCY5O95622 1261 aa20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 ANAPC15P60006 121 aa20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 TMEM266Q2M3C6 531 aa20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 NLRP5P59047 1200 aa20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.53■□□□□ 0.888e-6■■■■□ 22
LPCAT1-202ENST00000475622 DAPK1P53355 1430 aa20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
LPCAT1-202ENST00000475622 RAPGEF3O95398 923 aa20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 DZIP1Q86YF9 867 aaKnown RBP20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 CTNNBL1Q8WYA6 563 aaPredicted RBP20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 MACROD2A1Z1Q3 448 aa20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 STX6O43752 255 aa20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 TRIM27P14373 513 aa20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 ZNF444Q8N0Y2 327 aaPredicted RBP20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 SPECC1Q5M775 1068 aa20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 ZNF652Q9Y2D9 606 aa20.52■□□□□ 0.88
LPCAT1-202ENST00000475622 WAPLQ7Z5K2 1190 aa20.52■□□□□ 0.87
LPCAT1-202ENST00000475622 PRKCSHP14314 528 aaPredicted RBP20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 STX1AQ16623 288 aa20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 TMOD3Q9NYL9 352 aa20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 RNF41Q9H4P4 317 aaPredicted RBP20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 TRIM21P19474 475 aaKnown RBP20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 MTIF2P46199 727 aaKnown RBP20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 CCDC96Q2M329 555 aa20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 RNF187Q5TA31 235 aaPredicted RBP20.51■□□□□ 0.87
LPCAT1-202ENST00000475622 LRPPRCP42704 1394 aaKnown RBP20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 NME9Q86XW9 330 aa20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 DCAF8L1A6NGE4 600 aa20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 ZNF165P49910 485 aa20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 HLTFQ14527 1009 aaKnown RBP eCLIP20.5■□□□□ 0.871e-6■■■■■ 29.5
LPCAT1-202ENST00000475622 SMC1AQ14683 1233 aaKnown RBP20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 SMARCC1Q92922 1105 aaPredicted RBP20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 TRERF1Q96PN7 1200 aa20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 KIF20AO95235 890 aa20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 PANK2Q9BZ23 570 aa20.5■□□□□ 0.87
LPCAT1-202ENST00000475622 BAG4O95429 457 aaKnown RBP20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 ECHDC1Q9NTX5 307 aa20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 EMILIN1Q9Y6C2 1016 aa20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 SLC5A1P13866 664 aa20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 GCOM1H8Y6P7 765 aaPredicted RBP20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 MYZAPP0CAP1 466 aa20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 MPRIPQ6WCQ1 1025 aa20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.49■□□□□ 0.873e-7■■■■■ 29.8
LPCAT1-202ENST00000475622 ANKIB1Q9P2G1 1089 aa20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
LPCAT1-202ENST00000475622 SCLT1Q96NL6 688 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms