RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 ZNF831Q5JPB2 1677 aa19.6■□□□□ 0.73
ATG9A-220ENST00000475339 DDNO94850 711 aaPredicted RBP19.6■□□□□ 0.73
ATG9A-220ENST00000475339 ERVV-2B6SEH9 535 aa19.59■□□□□ 0.73
ATG9A-220ENST00000475339 PTCD1O75127 700 aaKnown RBP19.59■□□□□ 0.73
ATG9A-220ENST00000475339 C2CD5Q86YS7 1000 aa19.59■□□□□ 0.73
ATG9A-220ENST00000475339 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
ATG9A-220ENST00000475339 EYA1Q99502 592 aa19.59■□□□□ 0.73
ATG9A-220ENST00000475339 VIRMAQ69YN4 1812 aaKnown RBP19.59■□□□□ 0.73
ATG9A-220ENST00000475339 PDE4DIPQ5VU43 2346 aa19.58■□□□□ 0.73
ATG9A-220ENST00000475339 CLSPNQ9HAW4 1339 aa19.58■□□□□ 0.73
ATG9A-220ENST00000475339 PPM1GO15355 546 aaPredicted RBP19.58■□□□□ 0.72
ATG9A-220ENST00000475339 ITGBL1O95965 494 aaPredicted RBP19.58■□□□□ 0.72
ATG9A-220ENST00000475339 LDHDQ86WU2 507 aa19.58■□□□□ 0.72
ATG9A-220ENST00000475339 MAP2K1Q02750 393 aaPredicted RBP19.57■□□□□ 0.72
ATG9A-220ENST00000475339 NFIXQ14938 502 aa19.57■□□□□ 0.72
ATG9A-220ENST00000475339 USPL1Q5W0Q7 1092 aa19.57■□□□□ 0.72
ATG9A-220ENST00000475339 CFAP44Q96MT7 982 aa19.57■□□□□ 0.72
ATG9A-220ENST00000475339 ZPR1O75312 459 aa19.56■□□□□ 0.72
ATG9A-220ENST00000475339 DEFB115Q30KQ5 88 aa19.56■□□□□ 0.72
ATG9A-220ENST00000475339 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
ATG9A-220ENST00000475339 RASSF10A6NK89 507 aa19.55■□□□□ 0.72
ATG9A-220ENST00000475339 H0YIN7 160 aa19.55■□□□□ 0.72
ATG9A-220ENST00000475339 INTS5Q6P9B9 1019 aaKnown RBP19.55■□□□□ 0.72
ATG9A-220ENST00000475339 WDR33Q9C0J8 1336 aaKnown RBP19.54■□□□□ 0.72
ATG9A-220ENST00000475339 TESK2Q96S53 571 aa19.54■□□□□ 0.72
ATG9A-220ENST00000475339 TAF1DQ9H5J8 278 aaPredicted RBP19.54■□□□□ 0.72
ATG9A-220ENST00000475339 IQCA1LA6NCM1 817 aa19.53■□□□□ 0.72
ATG9A-220ENST00000475339 C21orf2O43822 256 aa19.53■□□□□ 0.72
ATG9A-220ENST00000475339 SERPINB2P05120 415 aa19.53■□□□□ 0.72
ATG9A-220ENST00000475339 CABP4P57796 275 aa19.53■□□□□ 0.72
ATG9A-220ENST00000475339 DLEC1Q9Y238 1755 aa19.52■□□□□ 0.72
ATG9A-220ENST00000475339 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
ATG9A-220ENST00000475339 EAPPQ56P03 285 aaPredicted RBP19.51■□□□□ 0.71
ATG9A-220ENST00000475339 CARMIL3Q8ND23 1372 aa19.51■□□□□ 0.71
ATG9A-220ENST00000475339 ADAMTS7Q9UKP4 1686 aa19.5■□□□□ 0.71
ATG9A-220ENST00000475339 ZNF622Q969S3 477 aaKnown RBP eCLIP19.5■□□□□ 0.71
ATG9A-220ENST00000475339 TAOK3Q9H2K8 898 aa19.5■□□□□ 0.71
ATG9A-220ENST00000475339 DICER1Q9UPY3 1922 aaKnown RBP19.5■□□□□ 0.71
ATG9A-220ENST00000475339 WASHC2AQ641Q2 1341 aa19.5■□□□□ 0.71
ATG9A-220ENST00000475339 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
ATG9A-220ENST00000475339 ABT1Q9ULW3 272 aaKnown RBP19.49■□□□□ 0.71
ATG9A-220ENST00000475339 CLEC11AQ9Y240 323 aa19.49■□□□□ 0.71
ATG9A-220ENST00000475339 L3MBTL3Q96JM7 780 aaPredicted RBP19.48■□□□□ 0.71
ATG9A-220ENST00000475339 BEGAINQ9BUH8 593 aa19.48■□□□□ 0.71
ATG9A-220ENST00000475339 BCL2L12Q9HB09 334 aa19.48■□□□□ 0.71
ATG9A-220ENST00000475339 TSKSQ9UJT2 592 aa19.48■□□□□ 0.71
ATG9A-220ENST00000475339 SOS1Q07889 1333 aaPredicted RBP19.48■□□□□ 0.71
ATG9A-220ENST00000475339 NRXN2Q9P2S2 1712 aa19.48■□□□□ 0.71
ATG9A-220ENST00000475339 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
ATG9A-220ENST00000475339 MAP1SQ66K74 1059 aaPredicted RBP19.47■□□□□ 0.71
ATG9A-220ENST00000475339 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
ATG9A-220ENST00000475339 LTBP3Q9NS15 1303 aa19.47■□□□□ 0.71
ATG9A-220ENST00000475339 FER1L6Q2WGJ9 1857 aa19.46■□□□□ 0.71
ATG9A-220ENST00000475339 TNRC18O15417 2968 aaPredicted RBP19.46■□□□□ 0.71
ATG9A-220ENST00000475339 DNAJC10Q8IXB1 793 aa19.46■□□□□ 0.71
ATG9A-220ENST00000475339 CNTROBQ8N137 903 aa19.46■□□□□ 0.71
ATG9A-220ENST00000475339 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
ATG9A-220ENST00000475339 MCOLN1Q9GZU1 580 aa19.46■□□□□ 0.71
ATG9A-220ENST00000475339 TIMELESSQ9UNS1 1208 aa19.46■□□□□ 0.71
ATG9A-220ENST00000475339 TJP1Q07157 1748 aa19.45■□□□□ 0.7
ATG9A-220ENST00000475339 GRM1Q13255 1194 aa19.44■□□□□ 0.7
ATG9A-220ENST00000475339 BICDL1Q6ZP65 573 aa19.44■□□□□ 0.7
ATG9A-220ENST00000475339 SCN4AP35499 1836 aa19.44■□□□□ 0.7
ATG9A-220ENST00000475339 EPHX2P34913 555 aa19.43■□□□□ 0.7
ATG9A-220ENST00000475339 MTHFSP49914 203 aa19.43■□□□□ 0.7
ATG9A-220ENST00000475339 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
ATG9A-220ENST00000475339 PAXIP1Q6ZW49 1069 aaPredicted RBP19.43■□□□□ 0.7
ATG9A-220ENST00000475339 CAPNS2Q96L46 248 aa19.43■□□□□ 0.7
ATG9A-220ENST00000475339 GPR101Q96P66 508 aaPredicted RBP19.43■□□□□ 0.7
ATG9A-220ENST00000475339 HACL1Q9UJ83 578 aa19.43■□□□□ 0.7
ATG9A-220ENST00000475339 KIF20BQ96Q89 1820 aa19.43■□□□□ 0.7
ATG9A-220ENST00000475339 EIF4A2Q14240 407 aaKnown RBP19.42■□□□□ 0.7
ATG9A-220ENST00000475339 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
ATG9A-220ENST00000475339 CCDC24Q8N4L8 307 aa19.42■□□□□ 0.7
ATG9A-220ENST00000475339 COL15A1P39059 1388 aa19.41■□□□□ 0.7
ATG9A-220ENST00000475339 CYP19A1P11511 503 aaPredicted RBP19.4■□□□□ 0.7
ATG9A-220ENST00000475339 PDE6BP35913 854 aa19.4■□□□□ 0.7
ATG9A-220ENST00000475339 CYP4F22Q6NT55 531 aa19.4■□□□□ 0.7
ATG9A-220ENST00000475339 BRIP1Q9BX63 1249 aa19.4■□□□□ 0.7
ATG9A-220ENST00000475339 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
ATG9A-220ENST00000475339 ZNF541Q9H0D2 1346 aa19.4■□□□□ 0.7
ATG9A-220ENST00000475339 ECE1P42892 770 aa19.39■□□□□ 0.69
ATG9A-220ENST00000475339 PNMA8AQ86V59 439 aaPredicted RBP19.39■□□□□ 0.69
ATG9A-220ENST00000475339 DDX21Q9NR30 783 aaKnown RBP eCLIP19.39■□□□□ 0.69
ATG9A-220ENST00000475339 POLKQ9UBT6 870 aa19.39■□□□□ 0.69
ATG9A-220ENST00000475339 PDZRN3Q9UPQ7 1066 aa19.39■□□□□ 0.69
ATG9A-220ENST00000475339 ZBTB1Q9Y2K1 713 aa19.39■□□□□ 0.69
ATG9A-220ENST00000475339 SLC24A1O60721 1099 aa19.38■□□□□ 0.69
ATG9A-220ENST00000475339 FMR1Q06787 632 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATG9A-220ENST00000475339 ADAMTSL1Q8N6G6 1762 aa19.38■□□□□ 0.69
ATG9A-220ENST00000475339 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
ATG9A-220ENST00000475339 THSD7BQ9C0I4 1608 aa19.37■□□□□ 0.69
ATG9A-220ENST00000475339 RNF123Q5XPI4 1314 aa19.37■□□□□ 0.69
ATG9A-220ENST00000475339 DGKZQ13574 1117 aa19.37■□□□□ 0.69
ATG9A-220ENST00000475339 PRPF40BQ6NWY9 871 aaKnown RBP19.37■□□□□ 0.69
ATG9A-220ENST00000475339 ANKRD31Q8N7Z5 1873 aa19.37■□□□□ 0.69
ATG9A-220ENST00000475339 CASP8AP2Q9UKL3 1982 aa19.36■□□□□ 0.69
ATG9A-220ENST00000475339 AMOTQ4VCS5 1084 aa19.36■□□□□ 0.69
ATG9A-220ENST00000475339 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
ATG9A-220ENST00000475339 PRR5LQ6MZQ0 368 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms