RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CBX1P83916 185 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 TBC1D8BQ0IIM8 1120 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 LONRF1Q17RB8 773 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SPRYD3Q8NCJ5 442 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 PMFBP1Q8TBY8 1022 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 ZC3H15Q8WU90 426 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 TIGD1Q96MW7 591 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 MPHOSPH9Q99550 1183 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SPOCK3Q9BQ16 436 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 LMCD1Q9NZU5 365 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 DDX49Q9Y6V7 483 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SBNO2Q9Y2G9 1366 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 UNC13BO14795 1591 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 ANKRD50Q9ULJ7 1429 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 BTF3P20290 206 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 RPAINQ86UA6 219 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SAMD3Q8N6K7 520 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 TBC1D5Q92609 795 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 GTF2A1P52655 376 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 LMOD2Q6P5Q4 547 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 ERCC4Q92889 916 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 CLUAP1Q96AJ1 413 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 PPP1R1BQ9UD71 204 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 SSUH2Q9Y2M2 353 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 N6AMT1Q9Y5N5 214 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 COMMD10Q9Y6G5 202 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 TONSLQ96HA7 1378 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 HTATSF1O43719 755 aaKnown RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 TRAK2O60296 914 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 STIP1P31948 543 aaKnown RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 CCBE1Q6UXH8 406 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 RMI1Q9H9A7 625 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 PPP4R2Q9NY27 417 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 DIS3Q9Y2L1 958 aaKnown RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 CCDC196A0A1B0GTZ2 297 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 SMARCA1P28370 1054 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 HNRNPMP52272 730 aaKnown RBP eCLIP5.9□□□□□ -1.47
NPHP3-206ENST00000474871 CCDC70Q6NSX1 233 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 C16orf87Q6PH81 154 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 C1orf131Q8NDD1 294 aaKnown RBP5.9□□□□□ -1.47
NPHP3-206ENST00000474871 NUCKS1Q9H1E3 243 aaKnown RBP5.9□□□□□ -1.47
NPHP3-206ENST00000474871 TRPV5Q9NQA5 729 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 GLI2P10070 1586 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 ZNF24P17028 368 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TRDNQ13061 729 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 THEMISQ8N1K5 641 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ANKK1Q8NFD2 765 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 UHMK1Q8TAS1 419 aaKnown RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 KCNB2Q92953 911 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 POLR3CQ9BUI4 534 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TMEM98Q9Y2Y6 226 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ZSCAN9O15535 394 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 NEFHP12036 1026 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ADCY2Q08462 1091 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ZNF394Q53GI3 561 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 METTL14Q9HCE5 456 aaKnown RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ANKRD30BQ9BXX2 1392 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 KIF15Q9NS87 1388 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 RPRD2Q5VT52 1461 aaKnown RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ECM2O94769 699 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TPM3P06753 285 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ABL2P42684 1182 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TBC1D10BQ4KMP7 808 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 CCDC178Q5BJE1 867 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 SFMBT2Q5VUG0 894 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 DHRS1Q96LJ7 313 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 F8VZ95 297 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 RAD51AP2Q09MP3 1159 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 FXNQ16595 210 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 PCGF5Q86SE9 256 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 GPT2Q8TD30 523 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 NACC2Q96BF6 587 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 RSPH14Q9UHP6 348 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TMEM94Q12767 1356 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 NINLQ9Y2I6 1382 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ASXL2Q76L83 1435 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 FCHSD2O94868 740 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 VDRP11473 427 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 HDGFP51858 240 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 C1QBPQ07021 282 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 GRIK3Q13003 919 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 NGDNQ8NEJ9 315 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 FBXW7Q969H0 707 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 SLC35B4Q969S0 331 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 ZFYVE16Q7Z3T8 1539 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 MYSM1Q5VVJ2 828 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 TMEM63CQ9P1W3 806 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 POLKQ9UBT6 870 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 MORC2Q9Y6X9 1032 aaPredicted RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 TPPPO94811 219 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 PSMC1P62191 440 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 NSUN2Q08J23 767 aaKnown RBP eCLIP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 SMCR8Q8TEV9 937 aaPredicted RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 INO80Q9ULG1 1556 aaPredicted RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 DUOX2Q9NRD8 1548 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms