RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
LINC00888-202ENST00000471496 IL17REQ8NFR9 667 aa16.49■□□□□ 0.23
LINC00888-202ENST00000471496 TRPC6Q9Y210 931 aa16.49■□□□□ 0.23
LINC00888-202ENST00000471496 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
LINC00888-202ENST00000471496 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 PDGFDQ9GZP0 370 aaPredicted RBP16.48■□□□□ 0.23
LINC00888-202ENST00000471496 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 CEMIPQ8WUJ3 1361 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
LINC00888-202ENST00000471496 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 SIK1P57059 783 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 SLC4A9Q96Q91 983 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 METRNQ9UJH8 293 aa16.48■□□□□ 0.23
LINC00888-202ENST00000471496 LRP5O75197 1615 aa16.47■□□□□ 0.23
LINC00888-202ENST00000471496 CICQ96RK0 1608 aaPredicted RBP16.47■□□□□ 0.23
LINC00888-202ENST00000471496 TTLL13PA6NNM8 815 aa16.47■□□□□ 0.23
LINC00888-202ENST00000471496 CHRM1P11229 460 aaPredicted RBP16.47■□□□□ 0.23
LINC00888-202ENST00000471496 STK32BQ9NY57 414 aa16.47■□□□□ 0.23
LINC00888-202ENST00000471496 TJP1Q07157 1748 aa16.46■□□□□ 0.23
LINC00888-202ENST00000471496 UBR3Q6ZT12 1888 aa16.46■□□□□ 0.23
LINC00888-202ENST00000471496 ITPK1Q13572 414 aa16.45■□□□□ 0.22
LINC00888-202ENST00000471496 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
LINC00888-202ENST00000471496 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
LINC00888-202ENST00000471496 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
LINC00888-202ENST00000471496 LINC00116Q8NCU8 138 aa16.43■□□□□ 0.22
LINC00888-202ENST00000471496 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
LINC00888-202ENST00000471496 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 MCM10Q7L590 875 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 PNPLA7Q6ZV29 1317 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 ANP32CO43423 234 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
LINC00888-202ENST00000471496 ATP6V1AP38606 617 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 ZNF467Q7Z7K2 595 aaPredicted RBP16.42■□□□□ 0.22
LINC00888-202ENST00000471496 AMIGO3Q86WK7 504 aa16.42■□□□□ 0.22
LINC00888-202ENST00000471496 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
LINC00888-202ENST00000471496 PTCD1O75127 700 aaKnown RBP16.41■□□□□ 0.22
LINC00888-202ENST00000471496 TEFQ10587 303 aa16.4■□□□□ 0.22
LINC00888-202ENST00000471496 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00888-202ENST00000471496 CCDC146Q8IYE0 955 aa16.4■□□□□ 0.22
LINC00888-202ENST00000471496 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
LINC00888-202ENST00000471496 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.22
LINC00888-202ENST00000471496 NEFMP07197 916 aa16.39■□□□□ 0.21
LINC00888-202ENST00000471496 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
LINC00888-202ENST00000471496 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
LINC00888-202ENST00000471496 IER5LQ5T953 404 aa16.38■□□□□ 0.21
LINC00888-202ENST00000471496 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
LINC00888-202ENST00000471496 KDM3BQ7LBC6 1761 aa16.38■□□□□ 0.21
LINC00888-202ENST00000471496 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
LINC00888-202ENST00000471496 SMIM5Q71RC9 77 aa16.37■□□□□ 0.21
LINC00888-202ENST00000471496 COL23A1Q86Y22 540 aaPredicted RBP16.37■□□□□ 0.21
LINC00888-202ENST00000471496 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
LINC00888-202ENST00000471496 TMEM106CQ9BVX2 250 aa16.37■□□□□ 0.21
LINC00888-202ENST00000471496 KCNQ3O43525 872 aa16.36■□□□□ 0.21
LINC00888-202ENST00000471496 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
LINC00888-202ENST00000471496 HMGB2P26583 209 aaKnown RBP16.36■□□□□ 0.21
LINC00888-202ENST00000471496 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
LINC00888-202ENST00000471496 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
LINC00888-202ENST00000471496 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
LINC00888-202ENST00000471496 ZNF496Q96IT1 587 aaPredicted RBP16.35■□□□□ 0.21
LINC00888-202ENST00000471496 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 C4AP0C0L4 1744 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 PTGER2P43116 358 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 RIPK4P57078 832 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
LINC00888-202ENST00000471496 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 AK7Q96M32 723 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
LINC00888-202ENST00000471496 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
LINC00888-202ENST00000471496 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
LINC00888-202ENST00000471496 MTFR1LQ9H019 292 aa16.34■□□□□ 0.21
LINC00888-202ENST00000471496 MRS2Q9HD23 443 aa16.34■□□□□ 0.21
LINC00888-202ENST00000471496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
LINC00888-202ENST00000471496 GNPATO15228 680 aa16.33■□□□□ 0.2
LINC00888-202ENST00000471496 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.2
LINC00888-202ENST00000471496 CRKLP46109 303 aaKnown RBP16.33■□□□□ 0.2
LINC00888-202ENST00000471496 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
LINC00888-202ENST00000471496 INTS5Q6P9B9 1019 aaKnown RBP16.33■□□□□ 0.2
LINC00888-202ENST00000471496 SLC16A10Q8TF71 515 aa16.33■□□□□ 0.2
LINC00888-202ENST00000471496 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
LINC00888-202ENST00000471496 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.2
LINC00888-202ENST00000471496 SSFA2P28290 1259 aa16.32■□□□□ 0.2
LINC00888-202ENST00000471496 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
LINC00888-202ENST00000471496 FLAD1Q8NFF5 587 aa16.31■□□□□ 0.2
LINC00888-202ENST00000471496 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
LINC00888-202ENST00000471496 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
LINC00888-202ENST00000471496 PHF14O94880 888 aa16.3■□□□□ 0.2
LINC00888-202ENST00000471496 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
LINC00888-202ENST00000471496 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
LINC00888-202ENST00000471496 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
LINC00888-202ENST00000471496 APAF1O14727 1248 aa16.29■□□□□ 0.2
LINC00888-202ENST00000471496 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
LINC00888-202ENST00000471496 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
LINC00888-202ENST00000471496 MAMSTRQ6ZN01 415 aa16.29■□□□□ 0.2
LINC00888-202ENST00000471496 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
LINC00888-202ENST00000471496 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 588 ms