RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 POTEIP0CG38 1075 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 POTEJP0CG39 1038 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 EAPPQ56P03 285 aaPredicted RBP9.49□□□□□ -0.89
HDAC1-204ENST00000471488 CHADLQ6NUI6 762 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 CARD14Q9BXL6 1004 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 CREBZFQ9NS37 354 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 CLEC11AQ9Y240 323 aa9.49□□□□□ -0.89
HDAC1-204ENST00000471488 COL5A3P25940 1745 aaPredicted RBP9.48□□□□□ -0.89
HDAC1-204ENST00000471488 SERPINB2P05120 415 aa9.48□□□□□ -0.89
HDAC1-204ENST00000471488 CTCFP49711 727 aaPredicted RBP9.48□□□□□ -0.89
HDAC1-204ENST00000471488 LBX1P52954 281 aa9.48□□□□□ -0.89
HDAC1-204ENST00000471488 GRM1Q13255 1194 aa9.48□□□□□ -0.89
HDAC1-204ENST00000471488 NFIXQ14938 502 aa9.48□□□□□ -0.89
HDAC1-204ENST00000471488 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
HDAC1-204ENST00000471488 DNAJC10Q8IXB1 793 aa9.48□□□□□ -0.89
HDAC1-204ENST00000471488 ZC3H4Q9UPT8 1303 aaKnown RBP9.48□□□□□ -0.89
HDAC1-204ENST00000471488 CCDC85CA6NKD9 419 aa9.47□□□□□ -0.89
HDAC1-204ENST00000471488 NFKBIEO00221 500 aa9.47□□□□□ -0.89
HDAC1-204ENST00000471488 DDNO94850 711 aaPredicted RBP9.47□□□□□ -0.89
HDAC1-204ENST00000471488 CANXP27824 592 aaKnown RBP9.47□□□□□ -0.89
HDAC1-204ENST00000471488 TM4SF1P30408 202 aa9.47□□□□□ -0.89
HDAC1-204ENST00000471488 POLKQ9UBT6 870 aa9.47□□□□□ -0.89
HDAC1-204ENST00000471488 CCDC88AQ3V6T2 1871 aa9.47□□□□□ -0.89
HDAC1-204ENST00000471488 MYH14Q7Z406 1995 aaKnown RBP9.46□□□□□ -0.89
HDAC1-204ENST00000471488 POTECB2RU33 542 aa9.46□□□□□ -0.9
HDAC1-204ENST00000471488 SLC34A2O95436 690 aa9.46□□□□□ -0.9
HDAC1-204ENST00000471488 VEGFBP49765 207 aa9.46□□□□□ -0.9
HDAC1-204ENST00000471488 INTS5Q6P9B9 1019 aaKnown RBP9.46□□□□□ -0.9
HDAC1-204ENST00000471488 KDM6AO15550 1401 aaPredicted RBP9.46□□□□□ -0.9
HDAC1-204ENST00000471488 SLC39A6Q13433 755 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 AEBP1Q8IUX7 1158 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 ABHD8Q96I13 439 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 PRDM10Q9NQV6 1147 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 ABT1Q9ULW3 272 aaKnown RBP9.45□□□□□ -0.9
HDAC1-204ENST00000471488 COL15A1P39059 1388 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 CNTNAP1P78357 1384 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 NCAPD2Q15021 1401 aa9.45□□□□□ -0.9
HDAC1-204ENST00000471488 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
HDAC1-204ENST00000471488 TAOK3Q9H2K8 898 aa9.44□□□□□ -0.9
HDAC1-204ENST00000471488 NARFQ9UHQ1 456 aa9.44□□□□□ -0.9
HDAC1-204ENST00000471488 ZBTB1Q9Y2K1 713 aa9.44□□□□□ -0.9
HDAC1-204ENST00000471488 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
HDAC1-204ENST00000471488 AFDNP55196 1824 aaKnown RBP9.43□□□□□ -0.9
HDAC1-204ENST00000471488 ANKRD26Q9UPS8 1709 aa9.43□□□□□ -0.9
HDAC1-204ENST00000471488 SOS1Q07889 1333 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-204ENST00000471488 IQCA1LA6NCM1 817 aa9.43□□□□□ -0.9
HDAC1-204ENST00000471488 MLLT1Q03111 559 aaPredicted RBP9.43□□□□□ -0.9
HDAC1-204ENST00000471488 SULT6B1Q6IMI4 303 aa9.43□□□□□ -0.9
HDAC1-204ENST00000471488 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
HDAC1-204ENST00000471488 TJP1Q07157 1748 aa9.42□□□□□ -0.9
HDAC1-204ENST00000471488 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
HDAC1-204ENST00000471488 PDE6BP35913 854 aa9.42□□□□□ -0.9
HDAC1-204ENST00000471488 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
HDAC1-204ENST00000471488 LDHDQ86WU2 507 aa9.42□□□□□ -0.9
HDAC1-204ENST00000471488 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
HDAC1-204ENST00000471488 CYP19A1P11511 503 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-204ENST00000471488 TBC1D9BQ66K14 1250 aa9.41□□□□□ -0.9
HDAC1-204ENST00000471488 MAP1SQ66K74 1059 aaPredicted RBP9.41□□□□□ -0.9
HDAC1-204ENST00000471488 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
HDAC1-204ENST00000471488 LGR6Q9HBX8 967 aa9.41□□□□□ -0.9
HDAC1-204ENST00000471488 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
HDAC1-204ENST00000471488 TBC1D2BQ9UPU7 963 aa9.41□□□□□ -0.9
HDAC1-204ENST00000471488 HSPA8P11142 646 aaKnown RBP9.4□□□□□ -0.9
HDAC1-204ENST00000471488 TTC5Q8N0Z6 440 aa9.4□□□□□ -0.9
HDAC1-204ENST00000471488 TAF1DQ9H5J8 278 aaPredicted RBP9.4□□□□□ -0.9
HDAC1-204ENST00000471488 SLC52A2Q9HAB3 445 aa9.4□□□□□ -0.9
HDAC1-204ENST00000471488 WBP1LQ9NX94 342 aa9.4□□□□□ -0.9
HDAC1-204ENST00000471488 WDR33Q9C0J8 1336 aaKnown RBP9.39□□□□□ -0.91
HDAC1-204ENST00000471488 CACNA1SQ13698 1873 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 ST5P78524 1137 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 MAP2K1Q02750 393 aaPredicted RBP9.39□□□□□ -0.91
HDAC1-204ENST00000471488 PRR5LQ6MZQ0 368 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
HDAC1-204ENST00000471488 MORC1Q86VD1 984 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 CNBD1Q8NA66 436 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 BRIP1Q9BX63 1249 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
HDAC1-204ENST00000471488 HACL1Q9UJ83 578 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 DLEC1Q9Y238 1755 aa9.39□□□□□ -0.91
HDAC1-204ENST00000471488 RNF123Q5XPI4 1314 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 PASKQ96RG2 1323 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 A0A087WZG4 1122 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 STARD3NLO95772 234 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 HMOX1P09601 288 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 EPHX2P34913 555 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 AKAP4Q5JQC9 854 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 CNTROBQ8N137 903 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 GJA3Q9Y6H8 435 aa9.38□□□□□ -0.91
HDAC1-204ENST00000471488 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
HDAC1-204ENST00000471488 ADAMTS7Q9UKP4 1686 aa9.37□□□□□ -0.91
HDAC1-204ENST00000471488 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
HDAC1-204ENST00000471488 CNGB1Q14028 1251 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-204ENST00000471488 SOGA3Q5TF21 947 aa9.37□□□□□ -0.91
HDAC1-204ENST00000471488 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms