RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 SPON1Q9HCB6 807 aa25.86■■□□□ 1.73
HDAC7-220ENST00000471235 BABAM1Q9NWV8 329 aa25.86■■□□□ 1.73
HDAC7-220ENST00000471235 PRAMEF22A3QJZ6 481 aa25.85■■□□□ 1.73
HDAC7-220ENST00000471235 EIF4A1P60842 406 aaKnown RBP25.85■■□□□ 1.73
HDAC7-220ENST00000471235 SLC16A10Q8TF71 515 aa25.85■■□□□ 1.73
HDAC7-220ENST00000471235 TEX13AQ9BXU3 409 aaPredicted RBP25.85■■□□□ 1.73
HDAC7-220ENST00000471235 ZBTB1Q9Y2K1 713 aa25.85■■□□□ 1.73
HDAC7-220ENST00000471235 SNRPA1P09661 255 aaKnown RBP25.84■■□□□ 1.73
HDAC7-220ENST00000471235 ATF5Q9Y2D1 282 aaPredicted RBP25.84■■□□□ 1.73
HDAC7-220ENST00000471235 SOS1Q07889 1333 aaPredicted RBP25.84■■□□□ 1.73
HDAC7-220ENST00000471235 STARD3NLO95772 234 aa25.83■■□□□ 1.73
HDAC7-220ENST00000471235 ADRA2BP18089 450 aa25.83■■□□□ 1.73
HDAC7-220ENST00000471235 CCDC27Q2M243 656 aa25.83■■□□□ 1.73
HDAC7-220ENST00000471235 CHL1O00533 1208 aa25.82■■□□□ 1.72
HDAC7-220ENST00000471235 LAS1LQ9Y4W2 734 aaKnown RBP25.82■■□□□ 1.72
HDAC7-220ENST00000471235 COL15A1P39059 1388 aa25.82■■□□□ 1.72
HDAC7-220ENST00000471235 PTGER2P43116 358 aa25.81■■□□□ 1.72
HDAC7-220ENST00000471235 NCBP3Q53F19 620 aaKnown RBP25.81■■□□□ 1.72
HDAC7-220ENST00000471235 USP16Q9Y5T5 823 aa25.81■■□□□ 1.72
HDAC7-220ENST00000471235 CALD1Q05682 793 aaKnown RBP25.8■■□□□ 1.72
HDAC7-220ENST00000471235 TRAPPC3LQ5T215 181 aa25.8■■□□□ 1.72
HDAC7-220ENST00000471235 CFAP44Q96MT7 982 aa25.8■■□□□ 1.72
HDAC7-220ENST00000471235 SGIP1Q9BQI5 828 aa25.8■■□□□ 1.72
HDAC7-220ENST00000471235 GIGYF1O75420 1035 aaPredicted RBP25.79■■□□□ 1.72
HDAC7-220ENST00000471235 MSL1Q68DK7 614 aa25.79■■□□□ 1.72
HDAC7-220ENST00000471235 WWC1Q8IX03 1113 aa25.79■■□□□ 1.72
HDAC7-220ENST00000471235 ARHGEF1Q92888 912 aaKnown RBP25.79■■□□□ 1.72
HDAC7-220ENST00000471235 A1BGP04217 495 aa25.78■■□□□ 1.72
HDAC7-220ENST00000471235 ZNF853P0CG23 659 aa25.78■■□□□ 1.72
HDAC7-220ENST00000471235 CANXP27824 592 aaKnown RBP25.78■■□□□ 1.72
HDAC7-220ENST00000471235 IFT57Q9NWB7 429 aa25.78■■□□□ 1.72
HDAC7-220ENST00000471235 MBIPQ9NS73 344 aa25.77■■□□□ 1.72
HDAC7-220ENST00000471235 GNAI1P63096 354 aa25.76■■□□□ 1.71
HDAC7-220ENST00000471235 SALL2Q9Y467 1007 aaPredicted RBP25.76■■□□□ 1.71
HDAC7-220ENST00000471235 USP42Q9H9J4 1324 aaKnown RBP25.75■■□□□ 1.71
HDAC7-220ENST00000471235 RFC4P35249 363 aa25.75■■□□□ 1.71
HDAC7-220ENST00000471235 AFDNP55196 1824 aaKnown RBP25.74■■□□□ 1.71
HDAC7-220ENST00000471235 PIP4K2AP48426 406 aaPredicted RBP25.74■■□□□ 1.71
HDAC7-220ENST00000471235 EIF5P55010 431 aaKnown RBP25.74■■□□□ 1.71
HDAC7-220ENST00000471235 KRT24Q2M2I5 525 aa25.74■■□□□ 1.71
HDAC7-220ENST00000471235 SRP68Q9UHB9 627 aaKnown RBP25.74■■□□□ 1.71
HDAC7-220ENST00000471235 KIF13BQ9NQT8 1826 aa25.73■■□□□ 1.71
HDAC7-220ENST00000471235 IL6STP40189 918 aaPredicted RBP25.73■■□□□ 1.71
HDAC7-220ENST00000471235 SRCAPQ6ZRS2 3230 aa25.73■■□□□ 1.71
HDAC7-220ENST00000471235 NUP98P52948 1817 aa25.72■■□□□ 1.71
HDAC7-220ENST00000471235 IL16Q14005 1332 aa25.71■■□□□ 1.71
HDAC7-220ENST00000471235 NBPF26B4DH59 902 aa25.71■■□□□ 1.71
HDAC7-220ENST00000471235 GYS1P13807 737 aa25.71■■□□□ 1.71
HDAC7-220ENST00000471235 POLD1P28340 1107 aa25.71■■□□□ 1.71
HDAC7-220ENST00000471235 NBPF10Q6P3W6 841 aaKnown RBP25.71■■□□□ 1.71
HDAC7-220ENST00000471235 NGEFQ8N5V2 710 aa25.71■■□□□ 1.71
HDAC7-220ENST00000471235 NBPF15Q8N660 670 aa25.71■■□□□ 1.71
HDAC7-220ENST00000471235 PPP1R1BQ9UD71 204 aaPredicted RBP25.71■■□□□ 1.71
HDAC7-220ENST00000471235 ZNF330Q9Y3S2 320 aaPredicted RBP25.7■■□□□ 1.7
HDAC7-220ENST00000471235 NRXN2Q9P2S2 1712 aa25.69■■□□□ 1.7
HDAC7-220ENST00000471235 NARFQ9UHQ1 456 aa25.69■■□□□ 1.7
HDAC7-220ENST00000471235 A0A087WZG4 1122 aa25.68■■□□□ 1.7
HDAC7-220ENST00000471235 USPL1Q5W0Q7 1092 aa25.68■■□□□ 1.7
HDAC7-220ENST00000471235 WDR63Q8IWG1 891 aa25.68■■□□□ 1.7
HDAC7-220ENST00000471235 TSR2Q969E8 191 aaKnown RBP25.68■■□□□ 1.7
HDAC7-220ENST00000471235 ARXQ96QS3 562 aa25.68■■□□□ 1.7
HDAC7-220ENST00000471235 ANKRD36CQ5JPF3 1778 aa25.68■■□□□ 1.7
HDAC7-220ENST00000471235 ERBB4Q15303 1308 aa25.67■■□□□ 1.7
HDAC7-220ENST00000471235 ZNF521Q96K83 1311 aa25.67■■□□□ 1.7
HDAC7-220ENST00000471235 ZPR1O75312 459 aa25.67■■□□□ 1.7
HDAC7-220ENST00000471235 CACNA1FO60840 1977 aa25.66■■□□□ 1.7
HDAC7-220ENST00000471235 HOXB7P09629 217 aa25.66■■□□□ 1.7
HDAC7-220ENST00000471235 KIAA1551Q9HCM1 1747 aa25.66■■□□□ 1.7
HDAC7-220ENST00000471235 EIF2S2P20042 333 aaKnown RBP25.65■■□□□ 1.7
HDAC7-220ENST00000471235 FKBP8Q14318 412 aa25.65■■□□□ 1.7
HDAC7-220ENST00000471235 BCL2L12Q9HB09 334 aa25.65■■□□□ 1.7
HDAC7-220ENST00000471235 DUSP27Q5VZP5 1158 aa25.64■■□□□ 1.7
HDAC7-220ENST00000471235 NLGN1Q8N2Q7 840 aa25.64■■□□□ 1.7
HDAC7-220ENST00000471235 TBC1D2BQ9UPU7 963 aa25.64■■□□□ 1.7
HDAC7-220ENST00000471235 FANCIQ9NVI1 1328 aa25.63■■□□□ 1.69
HDAC7-220ENST00000471235 MMP10P09238 476 aa25.63■■□□□ 1.69
HDAC7-220ENST00000471235 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
HDAC7-220ENST00000471235 DZIP3Q86Y13 1208 aaKnown RBP25.63■■□□□ 1.69
HDAC7-220ENST00000471235 NECTIN2Q92692 538 aa25.63■■□□□ 1.69
HDAC7-220ENST00000471235 CAMTA2O94983 1202 aa25.62■■□□□ 1.69
HDAC7-220ENST00000471235 ARFGEF2Q9Y6D5 1785 aa25.61■■□□□ 1.69
HDAC7-220ENST00000471235 MYL6BP14649 208 aa25.61■■□□□ 1.69
HDAC7-220ENST00000471235 PDIA6Q15084 440 aa25.61■■□□□ 1.69
HDAC7-220ENST00000471235 PROSER3Q2NL68 480 aa25.61■■□□□ 1.69
HDAC7-220ENST00000471235 HDGFL1Q5TGJ6 251 aa25.61■■□□□ 1.69
HDAC7-220ENST00000471235 C8orf58Q8NAV2 365 aa25.61■■□□□ 1.69
HDAC7-220ENST00000471235 FHDC1Q9C0D6 1143 aaPredicted RBP25.61■■□□□ 1.69
HDAC7-220ENST00000471235 SPINK5Q9NQ38 1064 aaPredicted RBP25.61■■□□□ 1.69
HDAC7-220ENST00000471235 N4BP2Q86UW6 1770 aaPredicted RBP25.61■■□□□ 1.69
HDAC7-220ENST00000471235 LRP10Q7Z4F1 713 aa25.6■■□□□ 1.69
HDAC7-220ENST00000471235 ANXA1P04083 346 aa25.59■■□□□ 1.69
HDAC7-220ENST00000471235 DDR1Q08345 913 aa25.59■■□□□ 1.69
HDAC7-220ENST00000471235 ANKRD31Q8N7Z5 1873 aa25.59■■□□□ 1.69
HDAC7-220ENST00000471235 BRCA1P38398 1863 aaKnown RBP25.58■■□□□ 1.69
HDAC7-220ENST00000471235 ELL2O00472 640 aaPredicted RBP25.58■■□□□ 1.69
HDAC7-220ENST00000471235 TSPYL6Q8N831 410 aa25.58■■□□□ 1.69
HDAC7-220ENST00000471235 C10orf71Q711Q0 1435 aa25.57■■□□□ 1.68
HDAC7-220ENST00000471235 TM4SF1P30408 202 aa25.57■■□□□ 1.68
HDAC7-220ENST00000471235 KLHL34Q8N239 644 aa25.57■■□□□ 1.68
HDAC7-220ENST00000471235 DDX21Q9NR30 783 aaKnown RBP eCLIP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms