RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 RARSP54136 660 aaKnown RBP12.72□□□□□ -0.37
CLK2-204ENST00000471047 RRP1P56182 461 aaKnown RBP12.72□□□□□ -0.37
CLK2-204ENST00000471047 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
CLK2-204ENST00000471047 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
CLK2-204ENST00000471047 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
CLK2-204ENST00000471047 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
CLK2-204ENST00000471047 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
CLK2-204ENST00000471047 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
CLK2-204ENST00000471047 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
CLK2-204ENST00000471047 VAMP4O75379 141 aa12.7□□□□□ -0.38
CLK2-204ENST00000471047 CAPN15O75808 1086 aa12.7□□□□□ -0.38
CLK2-204ENST00000471047 HSP90AB1P08238 724 aaKnown RBP12.7□□□□□ -0.38
CLK2-204ENST00000471047 APLP1P51693 650 aa12.7□□□□□ -0.38
CLK2-204ENST00000471047 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
CLK2-204ENST00000471047 BCAR3O75815 825 aa12.69□□□□□ -0.38
CLK2-204ENST00000471047 NEFLP07196 543 aa12.69□□□□□ -0.38
CLK2-204ENST00000471047 TEFQ10587 303 aa12.69□□□□□ -0.38
CLK2-204ENST00000471047 COL13A1Q5TAT6 717 aaPredicted RBP12.69□□□□□ -0.38
CLK2-204ENST00000471047 TSPYL6Q8N831 410 aa12.69□□□□□ -0.38
CLK2-204ENST00000471047 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
CLK2-204ENST00000471047 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
CLK2-204ENST00000471047 FKBP8Q14318 412 aa12.68□□□□□ -0.38
CLK2-204ENST00000471047 ALDH1L2Q3SY69 923 aa12.68□□□□□ -0.38
CLK2-204ENST00000471047 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
CLK2-204ENST00000471047 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
CLK2-204ENST00000471047 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
CLK2-204ENST00000471047 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
CLK2-204ENST00000471047 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
CLK2-204ENST00000471047 AMIGO3Q86WK7 504 aa12.67□□□□□ -0.38
CLK2-204ENST00000471047 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
CLK2-204ENST00000471047 TOGARAM1Q9Y4F4 1720 aa12.67□□□□□ -0.38
CLK2-204ENST00000471047 PCNTO95613 3336 aa12.66□□□□□ -0.38
CLK2-204ENST00000471047 LY75O60449 1722 aa12.66□□□□□ -0.38
CLK2-204ENST00000471047 HTRA3P83110 453 aa12.66□□□□□ -0.38
CLK2-204ENST00000471047 KRT24Q2M2I5 525 aa12.66□□□□□ -0.38
CLK2-204ENST00000471047 SSH1Q8WYL5 1049 aa12.66□□□□□ -0.38
CLK2-204ENST00000471047 HEG1Q9ULI3 1381 aa12.66□□□□□ -0.38
CLK2-204ENST00000471047 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
CLK2-204ENST00000471047 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
CLK2-204ENST00000471047 ERVV-2B6SEH9 535 aa12.65□□□□□ -0.38
CLK2-204ENST00000471047 PLIN1O60240 522 aa12.65□□□□□ -0.38
CLK2-204ENST00000471047 EIF4A1P60842 406 aaKnown RBP12.65□□□□□ -0.38
CLK2-204ENST00000471047 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
CLK2-204ENST00000471047 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
CLK2-204ENST00000471047 IRX6P78412 446 aaPredicted RBP12.64□□□□□ -0.39
CLK2-204ENST00000471047 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
CLK2-204ENST00000471047 TOMM70O94826 608 aa12.63□□□□□ -0.39
CLK2-204ENST00000471047 HOXB7P09629 217 aa12.63□□□□□ -0.39
CLK2-204ENST00000471047 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
CLK2-204ENST00000471047 BCL2L13Q9BXK5 485 aa12.63□□□□□ -0.39
CLK2-204ENST00000471047 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
CLK2-204ENST00000471047 SMC4Q9NTJ3 1288 aa12.63□□□□□ -0.39
CLK2-204ENST00000471047 UBR2Q8IWV8 1755 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 KCNQ3O43525 872 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 CABP4P57796 275 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 PDE3AQ14432 1141 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 C20orf194Q5TEA3 1177 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 ITGB4P16144 1822 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
CLK2-204ENST00000471047 PALLDQ8WX93 1383 aa12.61□□□□□ -0.39
CLK2-204ENST00000471047 PHF14O94880 888 aa12.61□□□□□ -0.39
CLK2-204ENST00000471047 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
CLK2-204ENST00000471047 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
CLK2-204ENST00000471047 CACNA1FO60840 1977 aa12.6□□□□□ -0.39
CLK2-204ENST00000471047 TNS4Q8IZW8 715 aa12.6□□□□□ -0.39
CLK2-204ENST00000471047 ARHGAP45Q92619 1136 aa12.6□□□□□ -0.39
CLK2-204ENST00000471047 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
CLK2-204ENST00000471047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.59□□□□□ -0.39
CLK2-204ENST00000471047 SLC39A6Q13433 755 aa12.59□□□□□ -0.39
CLK2-204ENST00000471047 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
CLK2-204ENST00000471047 JMYQ8N9B5 988 aa12.59□□□□□ -0.39
CLK2-204ENST00000471047 AK7Q96M32 723 aa12.59□□□□□ -0.39
CLK2-204ENST00000471047 NOB1Q9ULX3 412 aaKnown RBP12.59□□□□□ -0.39
CLK2-204ENST00000471047 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
CLK2-204ENST00000471047 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
CLK2-204ENST00000471047 C5P01031 1676 aa12.58□□□□□ -0.4
CLK2-204ENST00000471047 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.4
CLK2-204ENST00000471047 PRELPP51888 382 aa12.58□□□□□ -0.4
CLK2-204ENST00000471047 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
CLK2-204ENST00000471047 ATF7IPQ6VMQ6 1270 aa12.58□□□□□ -0.4
CLK2-204ENST00000471047 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
CLK2-204ENST00000471047 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
CLK2-204ENST00000471047 MS4A1P11836 297 aa12.57□□□□□ -0.4
CLK2-204ENST00000471047 TRIM27P14373 513 aa12.57□□□□□ -0.4
CLK2-204ENST00000471047 CANXP27824 592 aaKnown RBP12.57□□□□□ -0.4
CLK2-204ENST00000471047 EXOC6Q8TAG9 804 aa12.57□□□□□ -0.4
CLK2-204ENST00000471047 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
CLK2-204ENST00000471047 CRBNQ96SW2 442 aa12.57□□□□□ -0.4
CLK2-204ENST00000471047 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
CLK2-204ENST00000471047 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
CLK2-204ENST00000471047 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 SLC4A2P04920 1241 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 RLBP1P12271 317 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
CLK2-204ENST00000471047 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
CLK2-204ENST00000471047 PIGBQ92521 554 aa12.56□□□□□ -0.4
CLK2-204ENST00000471047 FMNL2Q96PY5 1086 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms