RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SF3B2Q13435 895 aaKnown RBP7.51□□□□□ -1.21
HDAC8-216ENST00000470998 SWT1Q5T5J6 900 aaKnown RBP7.51□□□□□ -1.21
HDAC8-216ENST00000470998 KRT27Q7Z3Y8 459 aa7.51□□□□□ -1.21
HDAC8-216ENST00000470998 METTL3Q86U44 580 aaKnown RBP7.51□□□□□ -1.21
HDAC8-216ENST00000470998 PXYLP1Q8TE99 480 aa7.51□□□□□ -1.21
HDAC8-216ENST00000470998 BTG4Q9NY30 223 aa7.51□□□□□ -1.21
HDAC8-216ENST00000470998 CCDC9Q9Y3X0 531 aaKnown RBP7.51□□□□□ -1.21
HDAC8-216ENST00000470998 ACEP12821 1306 aa7.51□□□□□ -1.21
HDAC8-216ENST00000470998 GLI3P10071 1580 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 NWD2Q9ULI1 1742 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 PPP4CP60510 307 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
HDAC8-216ENST00000470998 CCDC184Q52MB2 194 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 PRDM11Q9NQV5 511 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 TSR3Q9UJK0 312 aaKnown RBP7.5□□□□□ -1.21
HDAC8-216ENST00000470998 SPATA31A5Q5VU36 1347 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 RNF123Q5XPI4 1314 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 SPATA31A7Q8IWB4 1347 aa7.5□□□□□ -1.21
HDAC8-216ENST00000470998 ARHGEF28Q8N1W1 1705 aaKnown RBP7.49□□□□□ -1.21
HDAC8-216ENST00000470998 TRPM3Q9HCF6 1732 aaPredicted RBP7.49□□□□□ -1.21
HDAC8-216ENST00000470998 ALS2Q96Q42 1657 aa7.49□□□□□ -1.21
HDAC8-216ENST00000470998 IRF6O14896 467 aa7.49□□□□□ -1.21
HDAC8-216ENST00000470998 ABTB2Q8N961 1025 aa7.49□□□□□ -1.21
HDAC8-216ENST00000470998 CCDC102AQ96A19 550 aa7.49□□□□□ -1.21
HDAC8-216ENST00000470998 EVC2Q86UK5 1308 aa7.49□□□□□ -1.21
HDAC8-216ENST00000470998 RGPD8O14715 1765 aaPredicted RBP7.48□□□□□ -1.21
HDAC8-216ENST00000470998 CPDO75976 1380 aa7.48□□□□□ -1.21
HDAC8-216ENST00000470998 ZMYND10O75800 440 aa7.48□□□□□ -1.21
HDAC8-216ENST00000470998 ITSN1Q15811 1721 aa7.48□□□□□ -1.21
HDAC8-216ENST00000470998 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
HDAC8-216ENST00000470998 NYAP1Q6ZVC0 841 aa7.48□□□□□ -1.21
HDAC8-216ENST00000470998 TMEM134Q9H6X4 195 aa7.48□□□□□ -1.21
HDAC8-216ENST00000470998 COL14A1Q05707 1796 aaKnown RBP7.48□□□□□ -1.21
HDAC8-216ENST00000470998 USP19O94966 1318 aa7.48□□□□□ -1.21
HDAC8-216ENST00000470998 ANKRD36BQ8N2N9 1353 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 KIAA0232Q92628 1395 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 PPIP5K1Q6PFW1 1433 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 A0A0G2JS52 829 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 MYT1Q01538 1121 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 WDR43Q15061 677 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC8-216ENST00000470998 PPP4R2Q9NY27 417 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 THRAP3Q9Y2W1 955 aaKnown RBP7.47□□□□□ -1.21
HDAC8-216ENST00000470998 MYOM1P52179 1685 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 PLCH1Q4KWH8 1693 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 CGNL1Q0VF96 1302 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 SPATA31A1Q5TZJ5 1347 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 ABCA3Q99758 1704 aa7.47□□□□□ -1.21
HDAC8-216ENST00000470998 GCP02774 474 aa7.46□□□□□ -1.22
HDAC8-216ENST00000470998 PPP2R1AP30153 589 aa7.46□□□□□ -1.22
HDAC8-216ENST00000470998 BAG6P46379 1132 aa7.46□□□□□ -1.22
HDAC8-216ENST00000470998 EVA1CP58658 441 aa7.46□□□□□ -1.22
HDAC8-216ENST00000470998 WBP1LQ9NX94 342 aa7.46□□□□□ -1.22
HDAC8-216ENST00000470998 CABP1Q9NZU7 370 aa7.46□□□□□ -1.22
HDAC8-216ENST00000470998 USP6P35125 1406 aa7.45□□□□□ -1.22
HDAC8-216ENST00000470998 TOPAZ1Q8N9V7 1692 aa7.45□□□□□ -1.22
HDAC8-216ENST00000470998 ZC3H6P61129 1189 aaKnown RBP7.45□□□□□ -1.22
HDAC8-216ENST00000470998 CC2D1BQ5T0F9 858 aaKnown RBP7.45□□□□□ -1.22
HDAC8-216ENST00000470998 SULF1Q8IWU6 871 aa7.45□□□□□ -1.22
HDAC8-216ENST00000470998 RDH13Q8NBN7 331 aa7.45□□□□□ -1.22
HDAC8-216ENST00000470998 PRR14Q9BWN1 585 aa7.45□□□□□ -1.22
HDAC8-216ENST00000470998 STRN4Q9NRL3 753 aa7.45□□□□□ -1.22
HDAC8-216ENST00000470998 TTC21AQ8NDW8 1320 aa7.45□□□□□ -1.22
HDAC8-216ENST00000470998 QRICH2Q9H0J4 1663 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 NRAPQ86VF7 1730 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 CHRNA2Q15822 529 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 FAM196AQ6ZSG2 479 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 DEFB132Q7Z7B7 95 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 TCP11L2Q8N4U5 519 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 KCNH5Q8NCM2 988 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 NLRP7Q8WX94 980 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 DAXXQ9UER7 740 aaPredicted RBP7.44□□□□□ -1.22
HDAC8-216ENST00000470998 AATKQ6ZMQ8 1374 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 CRYBG1Q9Y4K1 1723 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 SSH2Q76I76 1423 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 NSD3Q9BZ95 1437 aa7.44□□□□□ -1.22
HDAC8-216ENST00000470998 DDX11L8A8MPP1 907 aa7.43□□□□□ -1.22
HDAC8-216ENST00000470998 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
HDAC8-216ENST00000470998 TTLL12Q14166 644 aaPredicted RBP7.43□□□□□ -1.22
HDAC8-216ENST00000470998 KMT5BQ4FZB7 885 aa7.43□□□□□ -1.22
HDAC8-216ENST00000470998 NUTM2GQ5VZR2 741 aa7.43□□□□□ -1.22
HDAC8-216ENST00000470998 DISP2A7MBM2 1401 aa7.43□□□□□ -1.22
HDAC8-216ENST00000470998 NRKQ7Z2Y5 1582 aa7.42□□□□□ -1.22
HDAC8-216ENST00000470998 PHRF1Q9P1Y6 1649 aaKnown RBP7.42□□□□□ -1.22
HDAC8-216ENST00000470998 CLCN1P35523 988 aa7.42□□□□□ -1.22
HDAC8-216ENST00000470998 AK7Q96M32 723 aa7.42□□□□□ -1.22
HDAC8-216ENST00000470998 CFAP53Q96M91 514 aa7.42□□□□□ -1.22
HDAC8-216ENST00000470998 CDCA7Q9BWT1 371 aaPredicted RBP7.42□□□□□ -1.22
HDAC8-216ENST00000470998 TERF2IPQ9NYB0 399 aa7.42□□□□□ -1.22
HDAC8-216ENST00000470998 TTC21BQ7Z4L5 1316 aa7.42□□□□□ -1.22
HDAC8-216ENST00000470998 CPSF1Q10570 1443 aaKnown RBP7.42□□□□□ -1.22
HDAC8-216ENST00000470998 SLIT3O75094 1523 aa7.42□□□□□ -1.22
HDAC8-216ENST00000470998 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
HDAC8-216ENST00000470998 CFHP08603 1231 aa7.41□□□□□ -1.22
HDAC8-216ENST00000470998 LARP1Q6PKG0 1096 aaKnown RBP7.41□□□□□ -1.22
HDAC8-216ENST00000470998 CRB1P82279 1406 aa7.41□□□□□ -1.22
HDAC8-216ENST00000470998 CAMTA1Q9Y6Y1 1673 aa7.41□□□□□ -1.22
HDAC8-216ENST00000470998 HDGFL2Q7Z4V5 671 aaPredicted RBP7.4□□□□□ -1.22
HDAC8-216ENST00000470998 ARHGEF25Q86VW2 580 aa7.4□□□□□ -1.22
HDAC8-216ENST00000470998 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.4□□□□□ -1.22
HDAC8-216ENST00000470998 PHOX2BQ99453 314 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms