RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ANKK1Q8NFD2 765 aa10.05□□□□□ -0.8
SMC4-212ENST00000470240 EMILIN1Q9Y6C2 1016 aa10.05□□□□□ -0.8
SMC4-212ENST00000470240 FER1L4A9Z1Z3 1794 aa10.04□□□□□ -0.8
SMC4-212ENST00000470240 SLIT1O75093 1534 aa10.04□□□□□ -0.8
SMC4-212ENST00000470240 RIMS1Q86UR5 1692 aaKnown RBP10.04□□□□□ -0.8
SMC4-212ENST00000470240 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
SMC4-212ENST00000470240 PTPN5P54829 565 aa10.04□□□□□ -0.8
SMC4-212ENST00000470240 RBM27Q9P2N5 1060 aaKnown RBP10.04□□□□□ -0.8
SMC4-212ENST00000470240 PTCH1Q13635 1447 aa10.04□□□□□ -0.8
SMC4-212ENST00000470240 ADAMTS13Q76LX8 1427 aa10.04□□□□□ -0.8
SMC4-212ENST00000470240 KIF24Q5T7B8 1368 aa10.03□□□□□ -0.8
SMC4-212ENST00000470240 PLEKHG3A1L390 1219 aa10.03□□□□□ -0.8
SMC4-212ENST00000470240 USP6P35125 1406 aa10.03□□□□□ -0.8
SMC4-212ENST00000470240 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
SMC4-212ENST00000470240 TMEM57Q8N5G2 664 aa10.03□□□□□ -0.8
SMC4-212ENST00000470240 GCC1Q96CN9 775 aa10.03□□□□□ -0.8
SMC4-212ENST00000470240 DLG5Q8TDM6 1919 aa10.03□□□□□ -0.8
SMC4-212ENST00000470240 ROBO2Q9HCK4 1378 aa10.02□□□□□ -0.8
SMC4-212ENST00000470240 NALCNQ8IZF0 1738 aa10.02□□□□□ -0.8
SMC4-212ENST00000470240 OVOS2A0A0J9YW53 1432 aa10.02□□□□□ -0.81
SMC4-212ENST00000470240 OVOS2Q6IE36 1432 aa10.02□□□□□ -0.81
SMC4-212ENST00000470240 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
SMC4-212ENST00000470240 TWISTNBQ3B726 338 aaPredicted RBP10.02□□□□□ -0.81
SMC4-212ENST00000470240 PADI6Q6TGC4 694 aa10.02□□□□□ -0.81
SMC4-212ENST00000470240 THSD4Q6ZMP0 1018 aa10.02□□□□□ -0.81
SMC4-212ENST00000470240 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
SMC4-212ENST00000470240 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
SMC4-212ENST00000470240 ZFRQ96KR1 1074 aaKnown RBP10.02□□□□□ -0.81
SMC4-212ENST00000470240 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
SMC4-212ENST00000470240 TNNQ9UQP3 1299 aa10.02□□□□□ -0.81
SMC4-212ENST00000470240 RRS1Q15050 365 aaKnown RBP10.01□□□□□ -0.81
SMC4-212ENST00000470240 NPDC1Q9NQX5 325 aaPredicted RBP10.01□□□□□ -0.81
SMC4-212ENST00000470240 ZBTB40Q9NUA8 1239 aa10.01□□□□□ -0.81
SMC4-212ENST00000470240 TBX22Q9Y458 520 aa10.01□□□□□ -0.81
SMC4-212ENST00000470240 ARHGAP23Q9P227 1491 aa10.01□□□□□ -0.81
SMC4-212ENST00000470240 FMN2Q9NZ56 1722 aa10.01□□□□□ -0.81
SMC4-212ENST00000470240 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.01□□□□□ -0.81
SMC4-212ENST00000470240 ACEP12821 1306 aa10.01□□□□□ -0.81
SMC4-212ENST00000470240 ARHGEF10O15013 1369 aa10.01□□□□□ -0.81
SMC4-212ENST00000470240 PIK3R4Q99570 1358 aa10.01□□□□□ -0.81
SMC4-212ENST00000470240 ANKARQ7Z5J8 1434 aa10□□□□□ -0.81
SMC4-212ENST00000470240 SMAPO00193 183 aa10□□□□□ -0.81
SMC4-212ENST00000470240 VAMP4O75379 141 aa10□□□□□ -0.81
SMC4-212ENST00000470240 ZNF853P0CG23 659 aa10□□□□□ -0.81
SMC4-212ENST00000470240 PTGDRQ13258 359 aa10□□□□□ -0.81
SMC4-212ENST00000470240 NGDNQ8NEJ9 315 aaKnown RBP10□□□□□ -0.81
SMC4-212ENST00000470240 RTF1Q92541 710 aaKnown RBP10□□□□□ -0.81
SMC4-212ENST00000470240 TATDN2Q93075 761 aa10□□□□□ -0.81
SMC4-212ENST00000470240 PHACTR3Q96KR7 559 aa10□□□□□ -0.81
SMC4-212ENST00000470240 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
SMC4-212ENST00000470240 MBIPQ9NS73 344 aa10□□□□□ -0.81
SMC4-212ENST00000470240 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
SMC4-212ENST00000470240 PRR36Q9H6K5 1346 aa10□□□□□ -0.81
SMC4-212ENST00000470240 USP31Q70CQ4 1352 aa10□□□□□ -0.81
SMC4-212ENST00000470240 EIF4A2Q14240 407 aaKnown RBP9.99□□□□□ -0.81
SMC4-212ENST00000470240 RBM26Q5T8P6 1007 aaKnown RBP9.99□□□□□ -0.81
SMC4-212ENST00000470240 SULT6B1Q6IMI4 303 aa9.99□□□□□ -0.81
SMC4-212ENST00000470240 ABCC4O15439 1325 aa9.99□□□□□ -0.81
SMC4-212ENST00000470240 SBNO1A3KN83 1393 aa9.99□□□□□ -0.81
SMC4-212ENST00000470240 FLT4P35916 1363 aa9.99□□□□□ -0.81
SMC4-212ENST00000470240 NUCB1Q02818 461 aa9.98□□□□□ -0.81
SMC4-212ENST00000470240 NFKBIBQ15653 356 aa9.98□□□□□ -0.81
SMC4-212ENST00000470240 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
SMC4-212ENST00000470240 CHD1LQ86WJ1 897 aa9.98□□□□□ -0.81
SMC4-212ENST00000470240 AMOTL2Q9Y2J4 779 aa9.98□□□□□ -0.81
SMC4-212ENST00000470240 KIAA0232Q92628 1395 aa9.98□□□□□ -0.81
SMC4-212ENST00000470240 LTKP29376 864 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 SLC4A3P48751 1232 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 AMPHP49418 695 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 BCAMP50895 628 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 HSCBQ8IWL3 235 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 GAS2L2Q8NHY3 880 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 LRCH3Q96II8 777 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 SLC26A8Q96RN1 970 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
SMC4-212ENST00000470240 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.97□□□□□ -0.81
SMC4-212ENST00000470240 PTPRCP08575 1304 aa9.97□□□□□ -0.81
SMC4-212ENST00000470240 RGPD1P0DJD0 1748 aa9.96□□□□□ -0.81
SMC4-212ENST00000470240 XRN1Q8IZH2 1706 aaKnown RBP9.96□□□□□ -0.81
SMC4-212ENST00000470240 SOWAHBA6NEL2 793 aa9.96□□□□□ -0.82
SMC4-212ENST00000470240 FBLN1P23142 703 aa9.96□□□□□ -0.82
SMC4-212ENST00000470240 MFAP1P55081 439 aaKnown RBP9.96□□□□□ -0.82
SMC4-212ENST00000470240 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.82
SMC4-212ENST00000470240 BCL11AQ9H165 835 aa9.96□□□□□ -0.82
SMC4-212ENST00000470240 BMP2KLQ5H9B9 411 aa9.95□□□□□ -0.82
SMC4-212ENST00000470240 CASC1Q6TDU7 716 aa9.95□□□□□ -0.82
SMC4-212ENST00000470240 CHMP4AQ9BY43 222 aa9.95□□□□□ -0.82
SMC4-212ENST00000470240 USP19O94966 1318 aa9.95□□□□□ -0.82
SMC4-212ENST00000470240 PTPRUQ92729 1446 aa9.95□□□□□ -0.82
SMC4-212ENST00000470240 PEAK1Q9H792 1746 aa9.94□□□□□ -0.82
SMC4-212ENST00000470240 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
SMC4-212ENST00000470240 SOS1Q07889 1333 aaPredicted RBP9.94□□□□□ -0.82
SMC4-212ENST00000470240 ELL2O00472 640 aaPredicted RBP9.94□□□□□ -0.82
SMC4-212ENST00000470240 ZBTB7BO15156 539 aaPredicted RBP9.94□□□□□ -0.82
SMC4-212ENST00000470240 HTATSF1O43719 755 aaKnown RBP9.94□□□□□ -0.82
SMC4-212ENST00000470240 HMMRO75330 724 aa9.94□□□□□ -0.82
SMC4-212ENST00000470240 ANKRD45Q5TZF3 282 aa9.94□□□□□ -0.82
SMC4-212ENST00000470240 TSPYL6Q8N831 410 aa9.94□□□□□ -0.82
SMC4-212ENST00000470240 TTC13Q8NBP0 860 aa9.94□□□□□ -0.82
SMC4-212ENST00000470240 STK31Q9BXU1 1019 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms