RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 IL25Q9H293 177 aa16.6■□□□□ 0.25
BRCA1-209ENST00000470026 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
BRCA1-209ENST00000470026 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
BRCA1-209ENST00000470026 PDLIM2Q96JY6 352 aa16.6■□□□□ 0.25
BRCA1-209ENST00000470026 HS1BP3Q53T59 392 aa16.59■□□□□ 0.25
BRCA1-209ENST00000470026 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
BRCA1-209ENST00000470026 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-209ENST00000470026 RBSNQ9H1K0 784 aa16.59■□□□□ 0.25
BRCA1-209ENST00000470026 PHF8Q9UPP1 1060 aa16.59■□□□□ 0.25
BRCA1-209ENST00000470026 MBD3O95983 291 aa16.58■□□□□ 0.25
BRCA1-209ENST00000470026 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.25
BRCA1-209ENST00000470026 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.25
BRCA1-209ENST00000470026 SURF6O75683 361 aaKnown RBP16.58■□□□□ 0.24
BRCA1-209ENST00000470026 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.24
BRCA1-209ENST00000470026 NBPF6Q5VWK0 638 aa16.58■□□□□ 0.24
BRCA1-209ENST00000470026 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
BRCA1-209ENST00000470026 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.24
BRCA1-209ENST00000470026 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.24
BRCA1-209ENST00000470026 NBPF4Q96M43 638 aa16.58■□□□□ 0.24
BRCA1-209ENST00000470026 RAD50Q92878 1312 aa16.58■□□□□ 0.24
BRCA1-209ENST00000470026 OVOS2A0A0G2JMS6 1433 aa16.57■□□□□ 0.24
BRCA1-209ENST00000470026 SGSM2O43147 1006 aa16.57■□□□□ 0.24
BRCA1-209ENST00000470026 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
BRCA1-209ENST00000470026 MTX1Q13505 466 aa16.57■□□□□ 0.24
BRCA1-209ENST00000470026 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
BRCA1-209ENST00000470026 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
BRCA1-209ENST00000470026 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
BRCA1-209ENST00000470026 LGR6Q9HBX8 967 aa16.57■□□□□ 0.24
BRCA1-209ENST00000470026 RBM27Q9P2N5 1060 aaKnown RBP16.57■□□□□ 0.24
BRCA1-209ENST00000470026 ADCY9O60503 1353 aa16.56■□□□□ 0.24
BRCA1-209ENST00000470026 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-209ENST00000470026 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
BRCA1-209ENST00000470026 CHAMP1Q96JM3 812 aa16.56■□□□□ 0.24
BRCA1-209ENST00000470026 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
BRCA1-209ENST00000470026 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
BRCA1-209ENST00000470026 RGPD2P0DJD1 1756 aa16.56■□□□□ 0.24
BRCA1-209ENST00000470026 SRGAP3O43295 1099 aa16.55■□□□□ 0.24
BRCA1-209ENST00000470026 AKAP4Q5JQC9 854 aa16.55■□□□□ 0.24
BRCA1-209ENST00000470026 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
BRCA1-209ENST00000470026 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
BRCA1-209ENST00000470026 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
BRCA1-209ENST00000470026 TTC14Q96N46 770 aa16.55■□□□□ 0.24
BRCA1-209ENST00000470026 TTC41PQ6P2S7 1318 aa16.55■□□□□ 0.24
BRCA1-209ENST00000470026 CAMTA1Q9Y6Y1 1673 aa16.54■□□□□ 0.24
BRCA1-209ENST00000470026 PI4KAP2A4QPH2 592 aa16.54■□□□□ 0.24
BRCA1-209ENST00000470026 PI4KAP1Q8N8J0 262 aa16.54■□□□□ 0.24
BRCA1-209ENST00000470026 KCNH5Q8NCM2 988 aa16.54■□□□□ 0.24
BRCA1-209ENST00000470026 NAP1L5Q96NT1 182 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-209ENST00000470026 UPF3BQ9BZI7 483 aaKnown RBP16.54■□□□□ 0.24
BRCA1-209ENST00000470026 KCNQ3O43525 872 aa16.53■□□□□ 0.24
BRCA1-209ENST00000470026 EIF2S2P20042 333 aaKnown RBP16.53■□□□□ 0.24
BRCA1-209ENST00000470026 CNTROBQ8N137 903 aa16.53■□□□□ 0.24
BRCA1-209ENST00000470026 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
BRCA1-209ENST00000470026 SLIT3O75094 1523 aa16.53■□□□□ 0.24
BRCA1-209ENST00000470026 ADAMTS7Q9UKP4 1686 aa16.52■□□□□ 0.24
BRCA1-209ENST00000470026 WDR33Q9C0J8 1336 aaKnown RBP16.52■□□□□ 0.23
BRCA1-209ENST00000470026 ALDH1L1O75891 902 aa16.52■□□□□ 0.23
BRCA1-209ENST00000470026 TMEM87AQ8NBN3 555 aa16.52■□□□□ 0.23
BRCA1-209ENST00000470026 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.23
BRCA1-209ENST00000470026 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
BRCA1-209ENST00000470026 AMOTQ4VCS5 1084 aa16.51■□□□□ 0.23
BRCA1-209ENST00000470026 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
BRCA1-209ENST00000470026 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
BRCA1-209ENST00000470026 SYCE3A1L190 88 aa16.51■□□□□ 0.23
BRCA1-209ENST00000470026 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
BRCA1-209ENST00000470026 KCNB2Q92953 911 aa16.51■□□□□ 0.23
BRCA1-209ENST00000470026 PXDNQ92626 1479 aa16.5■□□□□ 0.23
BRCA1-209ENST00000470026 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
BRCA1-209ENST00000470026 RNMTO43148 476 aaKnown RBP16.5■□□□□ 0.23
BRCA1-209ENST00000470026 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-209ENST00000470026 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-209ENST00000470026 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
BRCA1-209ENST00000470026 ZNF142P52746 1687 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-209ENST00000470026 TEFQ10587 303 aa16.49■□□□□ 0.23
BRCA1-209ENST00000470026 ZNF530Q6P9A1 599 aaPredicted RBP16.49■□□□□ 0.23
BRCA1-209ENST00000470026 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
BRCA1-209ENST00000470026 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
BRCA1-209ENST00000470026 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
BRCA1-209ENST00000470026 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
BRCA1-209ENST00000470026 OFD1O75665 1012 aa16.48■□□□□ 0.23
BRCA1-209ENST00000470026 NOL8Q76FK4 1167 aaKnown RBP16.48■□□□□ 0.23
BRCA1-209ENST00000470026 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.48■□□□□ 0.23
BRCA1-209ENST00000470026 UTYO14607 1347 aa16.48■□□□□ 0.23
BRCA1-209ENST00000470026 ZNF500O60304 480 aaPredicted RBP16.48■□□□□ 0.23
BRCA1-209ENST00000470026 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
BRCA1-209ENST00000470026 ARHGEF25Q86VW2 580 aa16.48■□□□□ 0.23
BRCA1-209ENST00000470026 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
BRCA1-209ENST00000470026 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
BRCA1-209ENST00000470026 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
BRCA1-209ENST00000470026 RUFY3Q7L099 469 aa16.47■□□□□ 0.23
BRCA1-209ENST00000470026 LRRC59Q96AG4 307 aaKnown RBP16.47■□□□□ 0.23
BRCA1-209ENST00000470026 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
BRCA1-209ENST00000470026 ANXA1P04083 346 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 AK2P54819 239 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
BRCA1-209ENST00000470026 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 MSNP26038 577 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms