RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 JMYQ8N9B5 988 aa21.16■□□□□ 0.98
SRRM1-207ENST00000468822 CYP19A1P11511 503 aaPredicted RBP21.15■□□□□ 0.98
SRRM1-207ENST00000468822 NFIXQ14938 502 aa21.15■□□□□ 0.98
SRRM1-207ENST00000468822 SLC52A2Q9HAB3 445 aa21.15■□□□□ 0.98
SRRM1-207ENST00000468822 BCL2L12Q9HB09 334 aa21.15■□□□□ 0.98
SRRM1-207ENST00000468822 AFDNP55196 1824 aaKnown RBP21.14■□□□□ 0.97
SRRM1-207ENST00000468822 ZPR1O75312 459 aa21.14■□□□□ 0.97
SRRM1-207ENST00000468822 MRC1P22897 1456 aa21.13■□□□□ 0.97
SRRM1-207ENST00000468822 TNRC6CQ9HCJ0 1690 aaKnown RBP21.13■□□□□ 0.97
SRRM1-207ENST00000468822 AKAP4Q5JQC9 854 aa21.13■□□□□ 0.97
SRRM1-207ENST00000468822 ZBTB1Q9Y2K1 713 aa21.13■□□□□ 0.97
SRRM1-207ENST00000468822 EIF4G2P78344 907 aaKnown RBP eCLIP21.12■□□□□ 0.97
SRRM1-207ENST00000468822 NARFQ9UHQ1 456 aa21.12■□□□□ 0.97
SRRM1-207ENST00000468822 NRXN2Q9P2S2 1712 aa21.12■□□□□ 0.97
SRRM1-207ENST00000468822 COL15A1P39059 1388 aa21.11■□□□□ 0.97
SRRM1-207ENST00000468822 CARMIL3Q8ND23 1372 aa21.11■□□□□ 0.97
SRRM1-207ENST00000468822 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
SRRM1-207ENST00000468822 HMOX1P09601 288 aa21.09■□□□□ 0.97
SRRM1-207ENST00000468822 SERPINB2P05120 415 aa21.08■□□□□ 0.97
SRRM1-207ENST00000468822 LMNB1P20700 586 aa21.08■□□□□ 0.97
SRRM1-207ENST00000468822 AMER1Q5JTC6 1135 aaPredicted RBP21.08■□□□□ 0.97
SRRM1-207ENST00000468822 SMC1BQ8NDV3 1235 aa21.08■□□□□ 0.97
SRRM1-207ENST00000468822 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.96
SRRM1-207ENST00000468822 NFKBIEO00221 500 aa21.07■□□□□ 0.96
SRRM1-207ENST00000468822 MTHFSDQ2M296 383 aaKnown RBP21.07■□□□□ 0.96
SRRM1-207ENST00000468822 ZC3H4Q9UPT8 1303 aaKnown RBP21.06■□□□□ 0.96
SRRM1-207ENST00000468822 GLTPD2A6NH11 291 aa21.06■□□□□ 0.96
SRRM1-207ENST00000468822 C2CD5Q86YS7 1000 aa21.06■□□□□ 0.96
SRRM1-207ENST00000468822 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
SRRM1-207ENST00000468822 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
SRRM1-207ENST00000468822 TTLL6Q8N841 843 aa21.05■□□□□ 0.96
SRRM1-207ENST00000468822 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
SRRM1-207ENST00000468822 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
SRRM1-207ENST00000468822 POTECB2RU33 542 aa21.04■□□□□ 0.96
SRRM1-207ENST00000468822 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
SRRM1-207ENST00000468822 TIAM2Q8IVF5 1701 aa21.04■□□□□ 0.96
SRRM1-207ENST00000468822 UBR2Q8IWV8 1755 aa21.03■□□□□ 0.96
SRRM1-207ENST00000468822 VEGFAP15692 232 aaPredicted RBP21.03■□□□□ 0.96
SRRM1-207ENST00000468822 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
SRRM1-207ENST00000468822 CAPN15O75808 1086 aa21.02■□□□□ 0.96
SRRM1-207ENST00000468822 EIF5P55010 431 aaKnown RBP21.02■□□□□ 0.96
SRRM1-207ENST00000468822 VSIG10Q8N0Z9 540 aa21.02■□□□□ 0.96
SRRM1-207ENST00000468822 CCDC88AQ3V6T2 1871 aa21.01■□□□□ 0.95
SRRM1-207ENST00000468822 ANKRD31Q8N7Z5 1873 aa21.01■□□□□ 0.95
SRRM1-207ENST00000468822 CCDC24Q8N4L8 307 aa21.01■□□□□ 0.95
SRRM1-207ENST00000468822 H0YIN7 160 aa21■□□□□ 0.95
SRRM1-207ENST00000468822 TBC1D9BQ66K14 1250 aa21■□□□□ 0.95
SRRM1-207ENST00000468822 COL11A2P13942 1736 aaPredicted RBP20.98■□□□□ 0.95
SRRM1-207ENST00000468822 TNS4Q8IZW8 715 aa20.98■□□□□ 0.95
SRRM1-207ENST00000468822 ZNF496Q96IT1 587 aaPredicted RBP20.98■□□□□ 0.95
SRRM1-207ENST00000468822 ZNF219Q9P2Y4 722 aaPredicted RBP20.98■□□□□ 0.95
SRRM1-207ENST00000468822 PRR5LQ6MZQ0 368 aa20.97■□□□□ 0.95
SRRM1-207ENST00000468822 C21orf2O43822 256 aa20.96■□□□□ 0.95
SRRM1-207ENST00000468822 STARD3NLO95772 234 aa20.96■□□□□ 0.95
SRRM1-207ENST00000468822 HSPA1AP0DMV8 641 aaKnown RBP20.96■□□□□ 0.95
SRRM1-207ENST00000468822 HSPA1BP0DMV9 641 aaKnown RBP20.96■□□□□ 0.95
SRRM1-207ENST00000468822 IL17REQ8NFR9 667 aa20.96■□□□□ 0.95
SRRM1-207ENST00000468822 ZNF622Q969S3 477 aaKnown RBP eCLIP20.96■□□□□ 0.952e-14■■■□□ 15
SRRM1-207ENST00000468822 TBC1D2BQ9UPU7 963 aa20.96■□□□□ 0.95
SRRM1-207ENST00000468822 KIF7Q2M1P5 1343 aa20.96■□□□□ 0.95
SRRM1-207ENST00000468822 SCN7AQ01118 1682 aa20.96■□□□□ 0.95
SRRM1-207ENST00000468822 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
SRRM1-207ENST00000468822 DIAPH1O60610 1272 aaKnown RBP20.95■□□□□ 0.94
SRRM1-207ENST00000468822 BRIP1Q9BX63 1249 aa20.95■□□□□ 0.94
SRRM1-207ENST00000468822 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
SRRM1-207ENST00000468822 POTEIP0CG38 1075 aa20.94■□□□□ 0.94
SRRM1-207ENST00000468822 POTEJP0CG39 1038 aa20.94■□□□□ 0.94
SRRM1-207ENST00000468822 HEG1Q9ULI3 1381 aa20.94■□□□□ 0.94
SRRM1-207ENST00000468822 FER1L6Q2WGJ9 1857 aa20.94■□□□□ 0.94
SRRM1-207ENST00000468822 A0A087WZG4 1122 aa20.93■□□□□ 0.94
SRRM1-207ENST00000468822 CC2D1BQ5T0F9 858 aaKnown RBP20.93■□□□□ 0.94
SRRM1-207ENST00000468822 ZNF790Q6PG37 636 aa20.93■□□□□ 0.94
SRRM1-207ENST00000468822 TTC5Q8N0Z6 440 aa20.93■□□□□ 0.94
SRRM1-207ENST00000468822 ZNF330Q9Y3S2 320 aaPredicted RBP20.93■□□□□ 0.94
SRRM1-207ENST00000468822 ERFEQ4G0M1 354 aa20.92■□□□□ 0.94
SRRM1-207ENST00000468822 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
SRRM1-207ENST00000468822 KCNQ3O43525 872 aa20.91■□□□□ 0.94
SRRM1-207ENST00000468822 CAMTA2O94983 1202 aa20.91■□□□□ 0.94
SRRM1-207ENST00000468822 A1BGP04217 495 aa20.91■□□□□ 0.94
SRRM1-207ENST00000468822 PDE6BP35913 854 aa20.91■□□□□ 0.94
SRRM1-207ENST00000468822 DICER1Q9UPY3 1922 aaKnown RBP20.91■□□□□ 0.94
SRRM1-207ENST00000468822 SLX4Q8IY92 1834 aa20.9■□□□□ 0.94
SRRM1-207ENST00000468822 IL6STP40189 918 aaPredicted RBP20.9■□□□□ 0.94
SRRM1-207ENST00000468822 DPY19L2Q6NUT2 758 aa20.9■□□□□ 0.94
SRRM1-207ENST00000468822 DDNO94850 711 aaPredicted RBP20.89■□□□□ 0.93
SRRM1-207ENST00000468822 LTBP3Q9NS15 1303 aa20.88■□□□□ 0.93
SRRM1-207ENST00000468822 GNAT3A8MTJ3 354 aa20.88■□□□□ 0.93
SRRM1-207ENST00000468822 TEFQ10587 303 aa20.88■□□□□ 0.93
SRRM1-207ENST00000468822 TAOK3Q9H2K8 898 aa20.88■□□□□ 0.93
SRRM1-207ENST00000468822 SRGNP10124 158 aa20.87■□□□□ 0.93
SRRM1-207ENST00000468822 PIP4K2AP48426 406 aaPredicted RBP20.87■□□□□ 0.93
SRRM1-207ENST00000468822 CHADLQ6NUI6 762 aa20.87■□□□□ 0.93
SRRM1-207ENST00000468822 PRPF40BQ6NWY9 871 aaKnown RBP20.87■□□□□ 0.93
SRRM1-207ENST00000468822 CNBD1Q8NA66 436 aa20.87■□□□□ 0.93
SRRM1-207ENST00000468822 TEX13AQ9BXU3 409 aaPredicted RBP20.87■□□□□ 0.93
SRRM1-207ENST00000468822 PDZRN3Q9UPQ7 1066 aa20.87■□□□□ 0.93
SRRM1-207ENST00000468822 CEMIPQ8WUJ3 1361 aa20.86■□□□□ 0.93
SRRM1-207ENST00000468822 U2SURPO15042 1029 aaKnown RBP20.86■□□□□ 0.93
SRRM1-207ENST00000468822 SETDB2Q96T68 719 aa20.86■□□□□ 0.93
SRRM1-207ENST00000468822 MKRN1Q9UHC7 482 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms