RNA–Protein interactions for RNA: ENST00000468146.5

GNL3-205, Transcript of G protein nucleolar 3, human

TSL 4

Gene GNL3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNL3-205	ENST00000468146	PCDH11X	Q9BZA7	1347 aa		13.78	□□□□□ -0.2
GNL3-205	ENST00000468146	PCDH11Y	Q9BZA8	1340 aa		13.78	□□□□□ -0.2
GNL3-205	ENST00000468146	TNS1	Q9HBL0	1735 aa	Known RBP	13.78	□□□□□ -0.2
GNL3-205	ENST00000468146	SBF2	Q86WG5	1849 aa		13.78	□□□□□ -0.2
GNL3-205	ENST00000468146	PHKG2	P15735	406 aa		13.77	□□□□□ -0.21
GNL3-205	ENST00000468146	CAMK2B	Q13554	666 aa		13.77	□□□□□ -0.21
GNL3-205	ENST00000468146	DOK7	Q18PE1	504 aa		13.77	□□□□□ -0.21
GNL3-205	ENST00000468146	DIEXF	Q68CQ4	756 aa	Known RBP	13.77	□□□□□ -0.21
GNL3-205	ENST00000468146	KCNV2	Q8TDN2	545 aa		13.77	□□□□□ -0.21
GNL3-205	ENST00000468146	SPG7	Q9UQ90	795 aa		13.77	□□□□□ -0.21
GNL3-205	ENST00000468146	DOT1L	Q8TEK3	1739 aa		13.76	□□□□□ -0.21
GNL3-205	ENST00000468146	SOCS7	O14512	581 aa		13.76	□□□□□ -0.21
GNL3-205	ENST00000468146	SNPH	O15079	494 aa		13.76	□□□□□ -0.21
GNL3-205	ENST00000468146	FCHSD2	O94868	740 aa		13.76	□□□□□ -0.21
GNL3-205	ENST00000468146	MTHFSD	Q2M296	383 aa	Known RBP	13.76	□□□□□ -0.21
GNL3-205	ENST00000468146	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.76	□□□□□ -0.21
GNL3-205	ENST00000468146	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.76	□□□□□ -0.21
GNL3-205	ENST00000468146	NHS	Q6T4R5	1651 aa		13.75	□□□□□ -0.21
GNL3-205	ENST00000468146	KDM6A	O15550	1401 aa	Predicted RBP	13.75	□□□□□ -0.21
GNL3-205	ENST00000468146	KCNQ2	O43526	872 aa		13.75	□□□□□ -0.21
GNL3-205	ENST00000468146	TRIM37	O94972	964 aa		13.75	□□□□□ -0.21
GNL3-205	ENST00000468146	AMOT	Q4VCS5	1084 aa		13.75	□□□□□ -0.21
GNL3-205	ENST00000468146	ACSBG1	Q96GR2	724 aa		13.75	□□□□□ -0.21
GNL3-205	ENST00000468146	PLEKHF1	Q96S99	279 aa		13.75	□□□□□ -0.21
GNL3-205	ENST00000468146	ZNF710	Q8N1W2	664 aa		13.74	□□□□□ -0.21
GNL3-205	ENST00000468146	MRS2	Q9HD23	443 aa		13.74	□□□□□ -0.21
GNL3-205	ENST00000468146	ADAMTS8	Q9UP79	889 aa		13.74	□□□□□ -0.21
GNL3-205	ENST00000468146	IFNL2	Q8IZJ0	200 aa		13.73	□□□□□ -0.21
GNL3-205	ENST00000468146	PNISR	Q8TF01	805 aa	Known RBP	13.73	□□□□□ -0.21
GNL3-205	ENST00000468146	ADAMTS7	Q9UKP4	1686 aa		13.72	□□□□□ -0.21
GNL3-205	ENST00000468146	SLC34A2	O95436	690 aa		13.72	□□□□□ -0.21
GNL3-205	ENST00000468146	WDR43	Q15061	677 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
GNL3-205	ENST00000468146	DPYSL4	O14531	572 aa		13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	PRIM1	P49642	420 aa	Known RBP	13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	MPRIP	Q6WCQ1	1025 aa		13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	CCDC146	Q8IYE0	955 aa		13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	OXER1	Q8TDS5	423 aa		13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	PTCD2	Q8WV60	388 aa	Known RBP	13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	FAM163A	Q96GL9	167 aa	Predicted RBP	13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	PCDHGA4	Q9Y5G9	962 aa		13.71	□□□□□ -0.21
GNL3-205	ENST00000468146	BTAF1	O14981	1849 aa		13.71	□□□□□ -0.22
GNL3-205	ENST00000468146	ITGB4	P16144	1822 aa		13.7	□□□□□ -0.22
GNL3-205	ENST00000468146	RIMBP2	O15034	1052 aa		13.7	□□□□□ -0.22
GNL3-205	ENST00000468146	AKAP4	Q5JQC9	854 aa		13.7	□□□□□ -0.22
GNL3-205	ENST00000468146	C1orf141	Q5JVX7	400 aa		13.7	□□□□□ -0.22
GNL3-205	ENST00000468146	DEFB132	Q7Z7B7	95 aa		13.7	□□□□□ -0.22
GNL3-205	ENST00000468146	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
GNL3-205	ENST00000468146	MAP3K5	Q99683	1374 aa		13.7	□□□□□ -0.22
GNL3-205	ENST00000468146	SCN11A	Q9UI33	1791 aa		13.69	□□□□□ -0.22
GNL3-205	ENST00000468146	ARSI	Q5FYB1	569 aa		13.69	□□□□□ -0.22
GNL3-205	ENST00000468146	GAS2L2	Q8NHY3	880 aa		13.69	□□□□□ -0.22
GNL3-205	ENST00000468146	DCAF5	Q96JK2	942 aa		13.69	□□□□□ -0.22
GNL3-205	ENST00000468146	LGR6	Q9HBX8	967 aa		13.69	□□□□□ -0.22
GNL3-205	ENST00000468146	MRC1	P22897	1456 aa		13.68	□□□□□ -0.22
GNL3-205	ENST00000468146	MAP3K9	P80192	1104 aa		13.68	□□□□□ -0.22
GNL3-205	ENST00000468146	SYTL4	Q96C24	671 aa	Predicted RBP	13.68	□□□□□ -0.22
GNL3-205	ENST00000468146	KAT6B	Q8WYB5	2073 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	DLG5	Q8TDM6	1919 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	GNAT3	A8MTJ3	354 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	RNMT	O43148	476 aa	Known RBP	13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	APBA3	O96018	575 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	HSP90AB1	P08238	724 aa	Known RBP	13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	NFE2L2	Q16236	605 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	CCDC125	Q86Z20	511 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	IL17RE	Q8NFR9	667 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	PIGB	Q92521	554 aa		13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	VIRMA	Q69YN4	1812 aa	Known RBP	13.67	□□□□□ -0.22
GNL3-205	ENST00000468146	CCER2	I3L3R5	266 aa		13.66	□□□□□ -0.22
GNL3-205	ENST00000468146	EN1	Q05925	392 aa	Predicted RBP	13.66	□□□□□ -0.22
GNL3-205	ENST00000468146	RUNDC1	Q96C34	613 aa		13.66	□□□□□ -0.22
GNL3-205	ENST00000468146	RRP7A	Q9Y3A4	280 aa	Known RBP	13.66	□□□□□ -0.22
GNL3-205	ENST00000468146	CEMIP	Q8WUJ3	1361 aa		13.66	□□□□□ -0.22
GNL3-205	ENST00000468146	MAPK8IP3	Q9UPT6	1336 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	ERVV-2	B6SEH9	535 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	ST18	O60284	1047 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	TBC1D12	O60347	775 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	TMPO	P42166	694 aa	Known RBP	13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	DCTN1	Q14203	1278 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	GPR153	Q6NV75	609 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	CAMKK2	Q96RR4	588 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	RGPD4	Q7Z3J3	1758 aa		13.65	□□□□□ -0.22
GNL3-205	ENST00000468146	SIPA1L3	O60292	1781 aa	Predicted RBP	13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	SENP3-EIF4A1	A0A087X0R7	540 aa		13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	SF3B2	Q13435	895 aa	Known RBP	13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	EZH2	Q15910	746 aa	Known RBP	13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	MCM10	Q7L590	875 aa		13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	NFATC2IP	Q8NCF5	419 aa		13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	PNN	Q9H307	717 aa	Known RBP	13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	ZSWIM6	Q9HCJ5	1215 aa		13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	TMOD3	Q9NYL9	352 aa		13.64	□□□□□ -0.23
GNL3-205	ENST00000468146	RREB1	Q92766	1687 aa		13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	NUDT7	P0C024	238 aa		13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	BAG6	P46379	1132 aa		13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	CABP4	P57796	275 aa		13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	FAM9B	Q8IZU0	186 aa		13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	ARHGEF1	Q92888	912 aa	Known RBP	13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	THUMPD2	Q9BTF0	503 aa	Known RBP	13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	SLC52A2	Q9HAB3	445 aa		13.63	□□□□□ -0.23
GNL3-205	ENST00000468146	ASAP1	Q9ULH1	1129 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms