RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CCT4P50991 539 aaKnown RBP18.05■□□□□ 0.48
PRPF38B-204ENST00000467302 ST18O60284 1047 aa18.05■□□□□ 0.48
PRPF38B-204ENST00000467302 TEFQ10587 303 aa18.05■□□□□ 0.48
PRPF38B-204ENST00000467302 ERC2O15083 957 aa18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 HOXB7P09629 217 aa18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 PRKCSHP14314 528 aaPredicted RBP18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 PDE1AP54750 535 aa18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 PKP1Q13835 747 aa18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 MPRIPQ6WCQ1 1025 aa18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 NECTIN2Q92692 538 aa18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 SLAIN2Q9P270 581 aa18.04■□□□□ 0.48
PRPF38B-204ENST00000467302 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 FLIIQ13045 1269 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 LMBRD1Q9NUN5 540 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 SOS2Q07890 1332 aaPredicted RBP18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 NHSL1Q5SYE7 1610 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 F6X3S4 739 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 ZNF445P59923 1031 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 PPP1R9BQ96SB3 815 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
PRPF38B-204ENST00000467302 EIF4A1P60842 406 aaKnown RBP18.02■□□□□ 0.48
PRPF38B-204ENST00000467302 MCTP1Q6DN14 999 aa18.02■□□□□ 0.48
PRPF38B-204ENST00000467302 RAPGEF4Q8WZA2 1011 aa18.02■□□□□ 0.48
PRPF38B-204ENST00000467302 SALL3Q9BXA9 1300 aa18.02■□□□□ 0.48
PRPF38B-204ENST00000467302 BTBD11A6QL63 1104 aa18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 FKBP5Q13451 457 aaPredicted RBP18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 ZGPATQ8N5A5 531 aaKnown RBP18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 TRIM44Q96DX7 344 aaPredicted RBP18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 NLRP2Q9NX02 1062 aa18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 AK9Q5TCS8 1911 aa18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 NASPP49321 788 aaPredicted RBP18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 ZDHHC9Q9Y397 364 aa18.01■□□□□ 0.47
PRPF38B-204ENST00000467302 SCN11AQ9UI33 1791 aa18■□□□□ 0.47
PRPF38B-204ENST00000467302 GNAI2P04899 355 aa18■□□□□ 0.47
PRPF38B-204ENST00000467302 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
PRPF38B-204ENST00000467302 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
PRPF38B-204ENST00000467302 MEGF6O75095 1541 aa18■□□□□ 0.47
PRPF38B-204ENST00000467302 CSB-PGBD3P0DP91 1061 aa17.99■□□□□ 0.47
PRPF38B-204ENST00000467302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.99■□□□□ 0.472e-6■■■□□ 15.4
PRPF38B-204ENST00000467302 KCNQ3O43525 872 aa17.98■□□□□ 0.47
PRPF38B-204ENST00000467302 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
PRPF38B-204ENST00000467302 EIF2S2P20042 333 aaKnown RBP17.98■□□□□ 0.47
PRPF38B-204ENST00000467302 CHRNA2Q15822 529 aa17.98■□□□□ 0.47
PRPF38B-204ENST00000467302 ZSCAN23Q3MJ62 389 aa17.98■□□□□ 0.47
PRPF38B-204ENST00000467302 NAP1L5Q96NT1 182 aaPredicted RBP17.98■□□□□ 0.47
PRPF38B-204ENST00000467302 EXOC6BQ9Y2D4 811 aa17.97■□□□□ 0.47
PRPF38B-204ENST00000467302 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
PRPF38B-204ENST00000467302 CAVIN1Q6NZI2 390 aaKnown RBP17.96■□□□□ 0.47
PRPF38B-204ENST00000467302 ESYT1Q9BSJ8 1104 aa17.96■□□□□ 0.47
PRPF38B-204ENST00000467302 LRRCC1Q9C099 1032 aa17.96■□□□□ 0.47
PRPF38B-204ENST00000467302 GNAI3P08754 354 aa17.95■□□□□ 0.46
PRPF38B-204ENST00000467302 ATP8B2P98198 1209 aa17.95■□□□□ 0.46
PRPF38B-204ENST00000467302 MRC1P22897 1456 aa17.95■□□□□ 0.46
PRPF38B-204ENST00000467302 KDM6AO15550 1401 aaPredicted RBP17.95■□□□□ 0.46
PRPF38B-204ENST00000467302 TUBGCP6Q96RT7 1819 aa17.95■□□□□ 0.46
PRPF38B-204ENST00000467302 PNMA6EA0A0J9YXQ4 647 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 GPT2Q8TD30 523 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 IL17RAQ96F46 866 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 HEG1Q9ULI3 1381 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 PHKG2P15735 406 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 MX1P20591 662 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 PRDM11Q9NQV5 511 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 STAP2Q9UGK3 403 aa17.94■□□□□ 0.46
PRPF38B-204ENST00000467302 PRPF40AO75400 957 aaKnown RBP17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 MCM2P49736 904 aa17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 NEK4P51957 841 aa17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 COL5A2P05997 1499 aaPredicted RBP17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 CHMLP26374 656 aa17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 CUL4AQ13619 759 aa17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 CHPF2Q9P2E5 772 aa17.93■□□□□ 0.46
PRPF38B-204ENST00000467302 WDR17Q8IZU2 1322 aa17.92■□□□□ 0.46
PRPF38B-204ENST00000467302 NCLP19338 710 aaKnown RBP17.92■□□□□ 0.46
PRPF38B-204ENST00000467302 ANAPC15P60006 121 aa17.92■□□□□ 0.46
PRPF38B-204ENST00000467302 ANP32BQ92688 251 aaKnown RBP17.92■□□□□ 0.46
PRPF38B-204ENST00000467302 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
PRPF38B-204ENST00000467302 ZSCAN30Q86W11 494 aa17.91■□□□□ 0.46
PRPF38B-204ENST00000467302 RBSNQ9H1K0 784 aa17.91■□□□□ 0.46
PRPF38B-204ENST00000467302 PALD1Q9ULE6 856 aa17.91■□□□□ 0.46
PRPF38B-204ENST00000467302 SRCIN1Q9C0H9 1055 aa17.9■□□□□ 0.46
PRPF38B-204ENST00000467302 SLC52A2Q9HAB3 445 aa17.9■□□□□ 0.46
PRPF38B-204ENST00000467302 DBF4Q9UBU7 674 aaPredicted RBP17.9■□□□□ 0.46
PRPF38B-204ENST00000467302 BRD1O95696 1058 aa17.89■□□□□ 0.46
PRPF38B-204ENST00000467302 MCCP23508 829 aa17.89■□□□□ 0.46
PRPF38B-204ENST00000467302 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.46
PRPF38B-204ENST00000467302 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.46
PRPF38B-204ENST00000467302 AOX1Q06278 1338 aa17.89■□□□□ 0.45
PRPF38B-204ENST00000467302 HS1BP3Q53T59 392 aa17.89■□□□□ 0.45
PRPF38B-204ENST00000467302 UBE2Q2Q8WVN8 375 aa17.89■□□□□ 0.45
PRPF38B-204ENST00000467302 CHAMP1Q96JM3 812 aa17.89■□□□□ 0.45
PRPF38B-204ENST00000467302 PDLIM2Q96JY6 352 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms