RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 ABCC6O95255 1503 aa10.01□□□□□ -0.81
SND1-205ENST00000467238 UTRNP46939 3433 aa10.01□□□□□ -0.81
SND1-205ENST00000467238 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
SND1-205ENST00000467238 PPP4CP60510 307 aa10□□□□□ -0.81
SND1-205ENST00000467238 EZH2Q15910 746 aaKnown RBP10□□□□□ -0.81
SND1-205ENST00000467238 ARHGEF25Q86VW2 580 aa10□□□□□ -0.81
SND1-205ENST00000467238 KCNH5Q8NCM2 988 aa10□□□□□ -0.81
SND1-205ENST00000467238 ZNF516Q92618 1163 aa10□□□□□ -0.81
SND1-205ENST00000467238 CAMKK2Q96RR4 588 aa10□□□□□ -0.81
SND1-205ENST00000467238 PARD3Q8TEW0 1356 aa10□□□□□ -0.81
SND1-205ENST00000467238 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
SND1-205ENST00000467238 WDR17Q8IZU2 1322 aa9.99□□□□□ -0.81
SND1-205ENST00000467238 USP31Q70CQ4 1352 aa9.99□□□□□ -0.81
SND1-205ENST00000467238 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
SND1-205ENST00000467238 OVOS2A0A0J9YW53 1432 aa9.99□□□□□ -0.81
SND1-205ENST00000467238 OVOS2Q6IE36 1432 aa9.99□□□□□ -0.81
SND1-205ENST00000467238 APBA3O96018 575 aa9.98□□□□□ -0.81
SND1-205ENST00000467238 CAMK2BQ13554 666 aa9.98□□□□□ -0.81
SND1-205ENST00000467238 TOM1L2Q6ZVM7 507 aa9.98□□□□□ -0.81
SND1-205ENST00000467238 IL21Q9HBE4 155 aa9.98□□□□□ -0.81
SND1-205ENST00000467238 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.98□□□□□ -0.81
SND1-205ENST00000467238 POTECB2RU33 542 aa9.97□□□□□ -0.81
SND1-205ENST00000467238 C11orf95C9JLR9 678 aaPredicted RBP9.97□□□□□ -0.81
SND1-205ENST00000467238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.97□□□□□ -0.816e-7■■□□□ 11.4
SND1-205ENST00000467238 EPAS1Q99814 870 aa9.97□□□□□ -0.81
SND1-205ENST00000467238 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
SND1-205ENST00000467238 R3HDM1Q15032 1099 aaKnown RBP9.96□□□□□ -0.82
SND1-205ENST00000467238 DDB1Q16531 1140 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 NKX2-3Q8TAU0 364 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 TMC1Q8TDI8 760 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 PUS7Q96PZ0 661 aaKnown RBP9.96□□□□□ -0.82
SND1-205ENST00000467238 TESK2Q96S53 571 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 CARD10Q9BWT7 1032 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 SLC12A5Q9H2X9 1139 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 A0A1W2PP64 1363 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.82
SND1-205ENST00000467238 RGPD2P0DJD1 1756 aa9.96□□□□□ -0.82
SND1-205ENST00000467238 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
SND1-205ENST00000467238 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
SND1-205ENST00000467238 SAMD7Q7Z3H4 446 aa9.95□□□□□ -0.82
SND1-205ENST00000467238 HDGFL2Q7Z4V5 671 aaPredicted RBP9.95□□□□□ -0.82
SND1-205ENST00000467238 NME9Q86XW9 330 aa9.95□□□□□ -0.82
SND1-205ENST00000467238 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
SND1-205ENST00000467238 BCL9O00512 1426 aa9.95□□□□□ -0.82
SND1-205ENST00000467238 CCDC7Q96M83 1385 aa9.94□□□□□ -0.82
SND1-205ENST00000467238 NINLQ9Y2I6 1382 aa9.94□□□□□ -0.82
SND1-205ENST00000467238 CSB-PGBD3P0DP91 1061 aa9.94□□□□□ -0.82
SND1-205ENST00000467238 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
SND1-205ENST00000467238 NHSQ6T4R5 1651 aa9.93□□□□□ -0.82
SND1-205ENST00000467238 TNS2Q63HR2 1409 aa9.93□□□□□ -0.82
SND1-205ENST00000467238 ST20-MTHFSA0A0A6YYL1 179 aa9.93□□□□□ -0.82
SND1-205ENST00000467238 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
SND1-205ENST00000467238 SMAPO00193 183 aa9.93□□□□□ -0.82
SND1-205ENST00000467238 MARCH10Q8NA82 808 aaPredicted RBP9.93□□□□□ -0.82
SND1-205ENST00000467238 BTAF1O14981 1849 aa9.93□□□□□ -0.82
SND1-205ENST00000467238 KIF20BQ96Q89 1820 aa9.93□□□□□ -0.82
SND1-205ENST00000467238 CASZ1Q86V15 1759 aa9.92□□□□□ -0.82
SND1-205ENST00000467238 PLSCR1O15162 318 aa9.91□□□□□ -0.82
SND1-205ENST00000467238 LCE2AQ5TA79 106 aaPredicted RBP9.91□□□□□ -0.82
SND1-205ENST00000467238 PTF1AQ7RTS3 328 aa9.91□□□□□ -0.82
SND1-205ENST00000467238 GOLGB1Q14789 3259 aaKnown RBP9.91□□□□□ -0.82
SND1-205ENST00000467238 SHANK3Q9BYB0 1731 aa9.9□□□□□ -0.82
SND1-205ENST00000467238 USP47Q96K76 1375 aa9.9□□□□□ -0.82
SND1-205ENST00000467238 MYOM1P52179 1685 aa9.9□□□□□ -0.82
SND1-205ENST00000467238 EXOC5O00471 708 aa9.9□□□□□ -0.82
SND1-205ENST00000467238 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.82
SND1-205ENST00000467238 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
SND1-205ENST00000467238 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
SND1-205ENST00000467238 FAM198AQ9UFP1 575 aa9.9□□□□□ -0.82
SND1-205ENST00000467238 ANKRD36BQ8N2N9 1353 aa9.89□□□□□ -0.83
SND1-205ENST00000467238 MAP2P11137 1827 aaKnown RBP9.89□□□□□ -0.83
SND1-205ENST00000467238 ANKRD24Q8TF21 1146 aa9.89□□□□□ -0.83
SND1-205ENST00000467238 NLRP2Q9NX02 1062 aa9.89□□□□□ -0.83
SND1-205ENST00000467238 IL2RBP14784 551 aa9.88□□□□□ -0.83
SND1-205ENST00000467238 APLP1P51693 650 aa9.88□□□□□ -0.83
SND1-205ENST00000467238 IP6K1Q92551 441 aa9.88□□□□□ -0.83
SND1-205ENST00000467238 DDX12PQ92771 950 aa9.88□□□□□ -0.83
SND1-205ENST00000467238 EMID1Q96A84 441 aaPredicted RBP9.88□□□□□ -0.83
SND1-205ENST00000467238 COG3Q96JB2 828 aa9.87□□□□□ -0.83
SND1-205ENST00000467238 DOT1LQ8TEK3 1739 aa9.87□□□□□ -0.83
SND1-205ENST00000467238 MAP3K19Q56UN5 1328 aa9.86□□□□□ -0.83
SND1-205ENST00000467238 PAPPAQ13219 1627 aa9.86□□□□□ -0.83
SND1-205ENST00000467238 DPYSL4O14531 572 aa9.86□□□□□ -0.83
SND1-205ENST00000467238 KCNQ2O43526 872 aa9.86□□□□□ -0.83
SND1-205ENST00000467238 TMF1P82094 1093 aa9.86□□□□□ -0.83
SND1-205ENST00000467238 TUBGCP6Q96RT7 1819 aa9.86□□□□□ -0.83
SND1-205ENST00000467238 LY75O60449 1722 aa9.85□□□□□ -0.83
SND1-205ENST00000467238 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
SND1-205ENST00000467238 FBLN1P23142 703 aa9.85□□□□□ -0.83
SND1-205ENST00000467238 HOXC9P31274 260 aa9.85□□□□□ -0.83
SND1-205ENST00000467238 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
SND1-205ENST00000467238 RTL1A6NKG5 1358 aa9.85□□□□□ -0.83
SND1-205ENST00000467238 FYB1O15117 783 aa9.84□□□□□ -0.83
SND1-205ENST00000467238 TREML4Q6UXN2 200 aa9.84□□□□□ -0.83
SND1-205ENST00000467238 LTV1Q96GA3 475 aaPredicted RBP9.84□□□□□ -0.83
SND1-205ENST00000467238 ACSBG1Q96GR2 724 aa9.84□□□□□ -0.83
SND1-205ENST00000467238 SPON1Q9HCB6 807 aa9.84□□□□□ -0.83
SND1-205ENST00000467238 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
SND1-205ENST00000467238 CHD4Q14839 1912 aa9.84□□□□□ -0.83
SND1-205ENST00000467238 CLSPNQ9HAW4 1339 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms