RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 ZBTB1Q9Y2K1 713 aa25.51■■□□□ 1.67
SRSF4-202ENST00000466448 COL15A1P39059 1388 aa25.51■■□□□ 1.67
SRSF4-202ENST00000466448 NARFQ9UHQ1 456 aa25.5■■□□□ 1.67
SRSF4-202ENST00000466448 ARFGEF1Q9Y6D6 1849 aa25.49■■□□□ 1.67
SRSF4-202ENST00000466448 NFIXQ14938 502 aa25.49■■□□□ 1.67
SRSF4-202ENST00000466448 VSIG10Q8N0Z9 540 aa25.48■■□□□ 1.67
SRSF4-202ENST00000466448 APLP1P51693 650 aa25.47■■□□□ 1.67
SRSF4-202ENST00000466448 BCL2L12Q9HB09 334 aa25.47■■□□□ 1.67
SRSF4-202ENST00000466448 RNF181Q9P0P0 153 aa25.47■■□□□ 1.67
SRSF4-202ENST00000466448 COL3A1P02461 1466 aaPredicted RBP25.45■■□□□ 1.66
SRSF4-202ENST00000466448 CANXP27824 592 aaKnown RBP25.44■■□□□ 1.66
SRSF4-202ENST00000466448 KDM2BQ8NHM5 1336 aa25.42■■□□□ 1.66
SRSF4-202ENST00000466448 UBR2Q8IWV8 1755 aa25.42■■□□□ 1.66
SRSF4-202ENST00000466448 SERPINB2P05120 415 aa25.42■■□□□ 1.66
SRSF4-202ENST00000466448 TTC5Q8N0Z6 440 aa25.42■■□□□ 1.66
SRSF4-202ENST00000466448 RBM46Q8TBY0 533 aaKnown RBP25.42■■□□□ 1.66
SRSF4-202ENST00000466448 NRXN2Q9P2S2 1712 aa25.41■■□□□ 1.66
SRSF4-202ENST00000466448 U2SURPO15042 1029 aaKnown RBP25.41■■□□□ 1.66
SRSF4-202ENST00000466448 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
SRSF4-202ENST00000466448 NPC1L1Q9UHC9 1359 aa25.41■■□□□ 1.66
SRSF4-202ENST00000466448 C16orf71Q8IYS4 520 aaPredicted RBP25.4■■□□□ 1.66
SRSF4-202ENST00000466448 DNAJC5GQ8N7S2 189 aa25.4■■□□□ 1.66
SRSF4-202ENST00000466448 STARD3NLO95772 234 aa25.39■■□□□ 1.66
SRSF4-202ENST00000466448 EIF5P55010 431 aaKnown RBP25.39■■□□□ 1.66
SRSF4-202ENST00000466448 RASSF7Q02833 373 aa25.39■■□□□ 1.66
SRSF4-202ENST00000466448 IL17REQ8NFR9 667 aa25.39■■□□□ 1.66
SRSF4-202ENST00000466448 ZNF496Q96IT1 587 aaPredicted RBP25.39■■□□□ 1.66
SRSF4-202ENST00000466448 CARMIL3Q8ND23 1372 aa25.39■■□□□ 1.65
SRSF4-202ENST00000466448 VIRMAQ69YN4 1812 aaKnown RBP25.39■■□□□ 1.65
SRSF4-202ENST00000466448 GNAT3A8MTJ3 354 aa25.38■■□□□ 1.65
SRSF4-202ENST00000466448 TEFQ10587 303 aa25.38■■□□□ 1.65
SRSF4-202ENST00000466448 AFDNP55196 1824 aaKnown RBP25.37■■□□□ 1.65
SRSF4-202ENST00000466448 ZNF790Q6PG37 636 aa25.37■■□□□ 1.65
SRSF4-202ENST00000466448 BICDL1Q6ZP65 573 aa25.37■■□□□ 1.65
SRSF4-202ENST00000466448 GAS2L2Q8NHY3 880 aa25.37■■□□□ 1.65
SRSF4-202ENST00000466448 RRAGCQ9HB90 399 aa25.37■■□□□ 1.65
SRSF4-202ENST00000466448 HEG1Q9ULI3 1381 aa25.36■■□□□ 1.65
SRSF4-202ENST00000466448 C2CD5Q86YS7 1000 aa25.36■■□□□ 1.65
SRSF4-202ENST00000466448 A0A087WZG4 1122 aa25.35■■□□□ 1.65
SRSF4-202ENST00000466448 FSTL1Q12841 308 aa25.35■■□□□ 1.65
SRSF4-202ENST00000466448 TTLL6Q8N841 843 aa25.35■■□□□ 1.65
SRSF4-202ENST00000466448 PRELPP51888 382 aa25.34■■□□□ 1.65
SRSF4-202ENST00000466448 ZC3H4Q9UPT8 1303 aaKnown RBP25.34■■□□□ 1.65
SRSF4-202ENST00000466448 H0YIN7 160 aa25.33■■□□□ 1.65
SRSF4-202ENST00000466448 TBC1D9BQ66K14 1250 aa25.33■■□□□ 1.65
SRSF4-202ENST00000466448 DLEC1Q9Y238 1755 aa25.33■■□□□ 1.65
SRSF4-202ENST00000466448 LMNB1P20700 586 aa25.32■■□□□ 1.64
SRSF4-202ENST00000466448 HTRA3P83110 453 aa25.32■■□□□ 1.64
SRSF4-202ENST00000466448 TEX13AQ9BXU3 409 aaPredicted RBP25.32■■□□□ 1.64
SRSF4-202ENST00000466448 ZNF330Q9Y3S2 320 aaPredicted RBP25.32■■□□□ 1.64
SRSF4-202ENST00000466448 CEMIPQ8WUJ3 1361 aa25.31■■□□□ 1.64
SRSF4-202ENST00000466448 TBC1D2BQ9UPU7 963 aa25.31■■□□□ 1.64
SRSF4-202ENST00000466448 TNRC6CQ9HCJ0 1690 aaKnown RBP25.31■■□□□ 1.64
SRSF4-202ENST00000466448 WDR90Q96KV7 1748 aa25.31■■□□□ 1.64
SRSF4-202ENST00000466448 SBF1O95248 1867 aa25.3■■□□□ 1.64
SRSF4-202ENST00000466448 IL6STP40189 918 aaPredicted RBP25.3■■□□□ 1.64
SRSF4-202ENST00000466448 PHACTR3Q96KR7 559 aa25.3■■□□□ 1.64
SRSF4-202ENST00000466448 FMNL2Q96PY5 1086 aa25.3■■□□□ 1.64
SRSF4-202ENST00000466448 SIPA1L3O60292 1781 aaPredicted RBP25.3■■□□□ 1.64
SRSF4-202ENST00000466448 SCN7AQ01118 1682 aa25.29■■□□□ 1.64
SRSF4-202ENST00000466448 NFKBIEO00221 500 aa25.29■■□□□ 1.64
SRSF4-202ENST00000466448 A1BGP04217 495 aa25.28■■□□□ 1.64
SRSF4-202ENST00000466448 PRKAR2BP31323 418 aa25.28■■□□□ 1.64
SRSF4-202ENST00000466448 PRR5LQ6MZQ0 368 aa25.28■■□□□ 1.64
SRSF4-202ENST00000466448 GLTPD2A6NH11 291 aa25.27■■□□□ 1.64
SRSF4-202ENST00000466448 KCNQ3O43525 872 aa25.27■■□□□ 1.64
SRSF4-202ENST00000466448 CCDC24Q8N4L8 307 aa25.27■■□□□ 1.64
SRSF4-202ENST00000466448 SMC1BQ8NDV3 1235 aa25.27■■□□□ 1.64
SRSF4-202ENST00000466448 BRIP1Q9BX63 1249 aa25.27■■□□□ 1.64
SRSF4-202ENST00000466448 RSPH6AQ9H0K4 717 aa25.27■■□□□ 1.64
SRSF4-202ENST00000466448 BTBD11A6QL63 1104 aa25.26■■□□□ 1.63
SRSF4-202ENST00000466448 PDE6BP35913 854 aa25.26■■□□□ 1.63
SRSF4-202ENST00000466448 KLRG1Q96E93 195 aa25.26■■□□□ 1.63
SRSF4-202ENST00000466448 ZNF622Q969S3 477 aaKnown RBP eCLIP25.25■■□□□ 1.635e-7■■□□□ 12
SRSF4-202ENST00000466448 CFAP53Q96M91 514 aa25.25■■□□□ 1.63
SRSF4-202ENST00000466448 CAMTA2O94983 1202 aa25.24■■□□□ 1.63
SRSF4-202ENST00000466448 PDZRN3Q9UPQ7 1066 aa25.24■■□□□ 1.63
SRSF4-202ENST00000466448 ANKRD31Q8N7Z5 1873 aa25.23■■□□□ 1.63
SRSF4-202ENST00000466448 C21orf2O43822 256 aa25.23■■□□□ 1.63
SRSF4-202ENST00000466448 VEGFAP15692 232 aaPredicted RBP25.23■■□□□ 1.63
SRSF4-202ENST00000466448 ZNF219Q9P2Y4 722 aaPredicted RBP25.23■■□□□ 1.63
SRSF4-202ENST00000466448 NPM2Q86SE8 214 aaKnown RBP25.22■■□□□ 1.63
SRSF4-202ENST00000466448 CNBD1Q8NA66 436 aa25.22■■□□□ 1.63
SRSF4-202ENST00000466448 SETDB2Q96T68 719 aa25.22■■□□□ 1.63
SRSF4-202ENST00000466448 USP16Q9Y5T5 823 aa25.22■■□□□ 1.63
SRSF4-202ENST00000466448 TIAM2Q8IVF5 1701 aa25.22■■□□□ 1.63
SRSF4-202ENST00000466448 COL11A2P13942 1736 aaPredicted RBP25.21■■□□□ 1.63
SRSF4-202ENST00000466448 DZIP3Q86Y13 1208 aaKnown RBP25.21■■□□□ 1.63
SRSF4-202ENST00000466448 JMYQ8N9B5 988 aa25.21■■□□□ 1.63
SRSF4-202ENST00000466448 PRAMEF22A3QJZ6 481 aa25.2■■□□□ 1.62
SRSF4-202ENST00000466448 PIP4K2AP48426 406 aaPredicted RBP25.2■■□□□ 1.62
SRSF4-202ENST00000466448 MCM10Q7L590 875 aa25.19■■□□□ 1.62
SRSF4-202ENST00000466448 NUDCQ9Y266 331 aa25.19■■□□□ 1.62
SRSF4-202ENST00000466448 NPHP1O15259 732 aa25.18■■□□□ 1.62
SRSF4-202ENST00000466448 U2AF1L5P0DN76 240 aaPredicted RBP25.18■■□□□ 1.62
SRSF4-202ENST00000466448 U2AF1Q01081 240 aaKnown RBP eCLIP25.18■■□□□ 1.625e-9■■□□□ 13.5
SRSF4-202ENST00000466448 POTECB2RU33 542 aa25.17■■□□□ 1.62
SRSF4-202ENST00000466448 PPP2R1AP30153 589 aa25.17■■□□□ 1.62
SRSF4-202ENST00000466448 ST5P78524 1137 aa25.17■■□□□ 1.62
SRSF4-202ENST00000466448 RTF1Q92541 710 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms