RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
UBE4B-206ENST00000466379 MAP3K2Q9Y2U5 619 aa16.85■□□□□ 0.29
UBE4B-206ENST00000466379 MRC1P22897 1456 aa16.85■□□□□ 0.29
UBE4B-206ENST00000466379 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
UBE4B-206ENST00000466379 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
UBE4B-206ENST00000466379 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
UBE4B-206ENST00000466379 CABP4P57796 275 aa16.84■□□□□ 0.29
UBE4B-206ENST00000466379 EVA1CP58658 441 aa16.84■□□□□ 0.29
UBE4B-206ENST00000466379 ZCRB1Q8TBF4 217 aaKnown RBP16.84■□□□□ 0.29
UBE4B-206ENST00000466379 PDIA6Q15084 440 aa16.84■□□□□ 0.29
UBE4B-206ENST00000466379 C22orf23Q9BZE7 217 aa16.84■□□□□ 0.29
UBE4B-206ENST00000466379 MYL6BP14649 208 aa16.83■□□□□ 0.28
UBE4B-206ENST00000466379 PIP4K2AP48426 406 aaPredicted RBP16.83■□□□□ 0.28
UBE4B-206ENST00000466379 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
UBE4B-206ENST00000466379 USP35Q9P2H5 1018 aa16.83■□□□□ 0.28
UBE4B-206ENST00000466379 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
UBE4B-206ENST00000466379 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 DDX21Q9NR30 783 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBE4B-206ENST00000466379 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
UBE4B-206ENST00000466379 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 HYPKQ9NX55 129 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 PLEKHG2Q9H7P9 1386 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 PCDH11XQ9BZA7 1347 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 PCDH11YQ9BZA8 1340 aa16.82■□□□□ 0.28
UBE4B-206ENST00000466379 IL2RBP14784 551 aa16.81■□□□□ 0.28
UBE4B-206ENST00000466379 DDX54Q8TDD1 881 aaKnown RBP16.81■□□□□ 0.28
UBE4B-206ENST00000466379 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
UBE4B-206ENST00000466379 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
UBE4B-206ENST00000466379 PPP1R42Q7Z4L9 355 aa16.8■□□□□ 0.28
UBE4B-206ENST00000466379 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
UBE4B-206ENST00000466379 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
UBE4B-206ENST00000466379 FMNL2Q96PY5 1086 aa16.79■□□□□ 0.28
UBE4B-206ENST00000466379 BTG4Q9NY30 223 aa16.79■□□□□ 0.28
UBE4B-206ENST00000466379 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
UBE4B-206ENST00000466379 SNRPA1P09661 255 aaKnown RBP16.79■□□□□ 0.28
UBE4B-206ENST00000466379 LRRCC1Q9C099 1032 aa16.79■□□□□ 0.28
UBE4B-206ENST00000466379 CDC45O75419 566 aa16.78■□□□□ 0.28
UBE4B-206ENST00000466379 SSH3Q8TE77 659 aa16.78■□□□□ 0.28
UBE4B-206ENST00000466379 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
UBE4B-206ENST00000466379 SRGAP3O43295 1099 aa16.77■□□□□ 0.28
UBE4B-206ENST00000466379 GLI3P10071 1580 aa16.77■□□□□ 0.28
UBE4B-206ENST00000466379 COPS6Q7L5N1 327 aa16.77■□□□□ 0.27
UBE4B-206ENST00000466379 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.27
UBE4B-206ENST00000466379 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.27
UBE4B-206ENST00000466379 DDX58O95786 925 aaKnown RBP16.76■□□□□ 0.27
UBE4B-206ENST00000466379 SDSP20132 328 aa16.76■□□□□ 0.27
UBE4B-206ENST00000466379 ALDH1L1O75891 902 aa16.76■□□□□ 0.27
UBE4B-206ENST00000466379 PDE1AP54750 535 aa16.76■□□□□ 0.27
UBE4B-206ENST00000466379 POLA2Q14181 598 aa16.76■□□□□ 0.27
UBE4B-206ENST00000466379 BECN1Q14457 450 aa16.76■□□□□ 0.27
UBE4B-206ENST00000466379 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
UBE4B-206ENST00000466379 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
UBE4B-206ENST00000466379 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
UBE4B-206ENST00000466379 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
UBE4B-206ENST00000466379 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
UBE4B-206ENST00000466379 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
UBE4B-206ENST00000466379 ERVV-2B6SEH9 535 aa16.73■□□□□ 0.27
UBE4B-206ENST00000466379 IGKV5-2P06315 115 aa16.73■□□□□ 0.27
UBE4B-206ENST00000466379 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
UBE4B-206ENST00000466379 MYD88Q99836 296 aa16.73■□□□□ 0.27
UBE4B-206ENST00000466379 SALL3Q9BXA9 1300 aa16.73■□□□□ 0.27
UBE4B-206ENST00000466379 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
UBE4B-206ENST00000466379 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
UBE4B-206ENST00000466379 LAMB4A4D0S4 1761 aa16.73■□□□□ 0.27
UBE4B-206ENST00000466379 PTCD1O75127 700 aaKnown RBP16.72■□□□□ 0.27
UBE4B-206ENST00000466379 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
UBE4B-206ENST00000466379 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
UBE4B-206ENST00000466379 OSBPL3Q9H4L5 887 aa16.72■□□□□ 0.27
UBE4B-206ENST00000466379 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-206ENST00000466379 GRM8O00222 908 aa16.72■□□□□ 0.27
UBE4B-206ENST00000466379 MX1P20591 662 aa16.72■□□□□ 0.27
UBE4B-206ENST00000466379 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
UBE4B-206ENST00000466379 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
UBE4B-206ENST00000466379 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
UBE4B-206ENST00000466379 COL14A1Q05707 1796 aaKnown RBP16.71■□□□□ 0.27
UBE4B-206ENST00000466379 UBR2Q8IWV8 1755 aa16.71■□□□□ 0.27
UBE4B-206ENST00000466379 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
UBE4B-206ENST00000466379 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
UBE4B-206ENST00000466379 KAZALD1Q96I82 304 aa16.71■□□□□ 0.27
UBE4B-206ENST00000466379 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-206ENST00000466379 METTL22Q9BUU2 404 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-206ENST00000466379 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
UBE4B-206ENST00000466379 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 RAB11FIP3O75154 756 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 NEXNQ0ZGT2 675 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 NBPF14Q5TI25 921 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
UBE4B-206ENST00000466379 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
UBE4B-206ENST00000466379 SLKQ9H2G2 1235 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-206ENST00000466379 COL22A1Q8NFW1 1626 aaPredicted RBP16.69■□□□□ 0.26
UBE4B-206ENST00000466379 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
UBE4B-206ENST00000466379 ADAMTS2O95450 1211 aa16.68■□□□□ 0.26
UBE4B-206ENST00000466379 A1BGP04217 495 aa16.68■□□□□ 0.26
UBE4B-206ENST00000466379 OS9Q13438 667 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms