RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 BTAF1O14981 1849 aa15.24■□□□□ 0.03
SEC61A1-203ENST00000464451 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
SEC61A1-203ENST00000464451 GNAT3A8MTJ3 354 aa15.24■□□□□ 0.03
SEC61A1-203ENST00000464451 CABP4P57796 275 aa15.24■□□□□ 0.03
SEC61A1-203ENST00000464451 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
SEC61A1-203ENST00000464451 NFATC2IPQ8NCF5 419 aa15.24■□□□□ 0.03
SEC61A1-203ENST00000464451 MAP3K5Q99683 1374 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 RNMTO43148 476 aaKnown RBP15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 TSPYL6Q8N831 410 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 ITGB4P16144 1822 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 MCM10Q7L590 875 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 PROM2Q8N271 834 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 IL17REQ8NFR9 667 aa15.23■□□□□ 0.03
SEC61A1-203ENST00000464451 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
SEC61A1-203ENST00000464451 ASAP1Q9ULH1 1129 aa15.22■□□□□ 0.03
SEC61A1-203ENST00000464451 PLSCR1O15162 318 aa15.21■□□□□ 0.03
SEC61A1-203ENST00000464451 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
SEC61A1-203ENST00000464451 UPF2Q9HAU5 1272 aaKnown RBP15.21■□□□□ 0.03
SEC61A1-203ENST00000464451 C8orf58Q8NAV2 365 aa15.2■□□□□ 0.02
SEC61A1-203ENST00000464451 DLG5Q8TDM6 1919 aa15.2■□□□□ 0.02
SEC61A1-203ENST00000464451 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
SEC61A1-203ENST00000464451 ZBTB7BO15156 539 aaPredicted RBP15.2■□□□□ 0.02
SEC61A1-203ENST00000464451 SEC24BO95487 1268 aa15.2■□□□□ 0.02
SEC61A1-203ENST00000464451 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
SEC61A1-203ENST00000464451 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
SEC61A1-203ENST00000464451 SLC52A2Q9HAB3 445 aa15.19■□□□□ 0.02
SEC61A1-203ENST00000464451 ATG3Q9NT62 314 aa15.19■□□□□ 0.02
SEC61A1-203ENST00000464451 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
SEC61A1-203ENST00000464451 ABCC4O15439 1325 aa15.19■□□□□ 0.02
SEC61A1-203ENST00000464451 SLC4A3P48751 1232 aa15.18■□□□□ 0.02
SEC61A1-203ENST00000464451 LRRC4BQ9NT99 713 aa15.18■□□□□ 0.02
SEC61A1-203ENST00000464451 PALLDQ8WX93 1383 aa15.18■□□□□ 0.02
SEC61A1-203ENST00000464451 CHL1O00533 1208 aa15.18■□□□□ 0.02
SEC61A1-203ENST00000464451 TEFQ10587 303 aa15.18■□□□□ 0.02
SEC61A1-203ENST00000464451 SLC39A6Q13433 755 aa15.18■□□□□ 0.02
SEC61A1-203ENST00000464451 NUCB1Q02818 461 aa15.17■□□□□ 0.02
SEC61A1-203ENST00000464451 PTCD1O75127 700 aaKnown RBP15.16■□□□□ 0.02
SEC61A1-203ENST00000464451 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
SEC61A1-203ENST00000464451 CCNL1Q9UK58 526 aaPredicted RBP15.16■□□□□ 0.02
SEC61A1-203ENST00000464451 DEKP35659 375 aaKnown RBP15.16■□□□□ 0.02
SEC61A1-203ENST00000464451 RREB1Q92766 1687 aa15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 ADAMTS7Q9UKP4 1686 aa15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 PSDA5PKW4 1024 aaPredicted RBP15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 BECN1Q14457 450 aa15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 SMARCC1Q92922 1105 aaPredicted RBP15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 TBC1D32Q96NH3 1257 aa15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 CEMIPQ8WUJ3 1361 aa15.15■□□□□ 0.02
SEC61A1-203ENST00000464451 NUP188Q5SRE5 1749 aa15.14■□□□□ 0.01
SEC61A1-203ENST00000464451 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
SEC61A1-203ENST00000464451 ANO8Q9HCE9 1232 aaPredicted RBP15.14■□□□□ 0.01
SEC61A1-203ENST00000464451 MRC1P22897 1456 aa15.14■□□□□ 0.01
SEC61A1-203ENST00000464451 RGPD3A6NKT7 1758 aaPredicted RBP15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 RGPD4Q7Z3J3 1758 aa15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 LOC102724428A0A0B4J2F2 783 aa15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 KCNQ3O43525 872 aa15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 SIK1P57059 783 aa15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 LY75O60449 1722 aa15.13■□□□□ 0.01
SEC61A1-203ENST00000464451 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
SEC61A1-203ENST00000464451 ATP6V1AP38606 617 aa15.12■□□□□ 0.01
SEC61A1-203ENST00000464451 SLC27A3Q5K4L6 730 aa15.12■□□□□ 0.01
SEC61A1-203ENST00000464451 SLC4A9Q96Q91 983 aa15.12■□□□□ 0.01
SEC61A1-203ENST00000464451 NBPF14Q5TI25 921 aa15.12■□□□□ 0.01
SEC61A1-203ENST00000464451 ITPK1Q13572 414 aa15.11■□□□□ 0.01
SEC61A1-203ENST00000464451 ZNF827Q17R98 1081 aa15.11■□□□□ 0.01
SEC61A1-203ENST00000464451 INTS3Q68E01 1043 aaKnown RBP15.11■□□□□ 0.01
SEC61A1-203ENST00000464451 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
SEC61A1-203ENST00000464451 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
SEC61A1-203ENST00000464451 PTPRCP08575 1304 aa15.1■□□□□ 0.01
SEC61A1-203ENST00000464451 TAF7Q15545 349 aaPredicted RBP15.1■□□□□ 0.01
SEC61A1-203ENST00000464451 ZNF790Q6PG37 636 aa15.1■□□□□ 0.01
SEC61A1-203ENST00000464451 SMIM5Q71RC9 77 aa15.1■□□□□ 0.01
SEC61A1-203ENST00000464451 C1orf115Q9H7X2 142 aa15.1■□□□□ 0.01
SEC61A1-203ENST00000464451 SIPA1L3O60292 1781 aaPredicted RBP15.09■□□□□ 0.01
SEC61A1-203ENST00000464451 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
SEC61A1-203ENST00000464451 ANKRD45Q5TZF3 282 aa15.09■□□□□ 0.01
SEC61A1-203ENST00000464451 LINC00116Q8NCU8 138 aa15.09■□□□□ 0.01
SEC61A1-203ENST00000464451 STK32BQ9NY57 414 aa15.09■□□□□ 0.01
SEC61A1-203ENST00000464451 KRT24Q2M2I5 525 aa15.08■□□□□ 0.01
SEC61A1-203ENST00000464451 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0.01
SEC61A1-203ENST00000464451 ZNF496Q96IT1 587 aaPredicted RBP15.08■□□□□ 0.01
SEC61A1-203ENST00000464451 PDGFDQ9GZP0 370 aaPredicted RBP15.08■□□□□ 0.01
SEC61A1-203ENST00000464451 PAPPAQ13219 1627 aa15.08■□□□□ 0
SEC61A1-203ENST00000464451 SLC15A2Q16348 729 aa15.08■□□□□ 0
SEC61A1-203ENST00000464451 BMP2KLQ5H9B9 411 aa15.08■□□□□ 0
SEC61A1-203ENST00000464451 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
SEC61A1-203ENST00000464451 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
SEC61A1-203ENST00000464451 DNAJC10Q8IXB1 793 aa15.07■□□□□ 0
SEC61A1-203ENST00000464451 C22orf23Q9BZE7 217 aa15.07■□□□□ 0
SEC61A1-203ENST00000464451 C5P01031 1676 aa15.07■□□□□ 0
SEC61A1-203ENST00000464451 AKT1S1Q96B36 256 aa15.06■□□□□ 0
SEC61A1-203ENST00000464451 TFCP2L1Q9NZI6 479 aa15.06■□□□□ 0
SEC61A1-203ENST00000464451 PRAMEF22A3QJZ6 481 aa15.06■□□□□ 0
SEC61A1-203ENST00000464451 MFAP1P55081 439 aaKnown RBP15.06■□□□□ 0
SEC61A1-203ENST00000464451 PHF14O94880 888 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms