RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 BICD2Q8TD16 824 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 CHMP4CQ96CF2 233 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 LRRCC1Q9C099 1032 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 PPP6R1Q9UPN7 881 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 NEO1Q92859 1461 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 PREX1Q8TCU6 1659 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 PTPRTO14522 1441 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 SPHKAPQ2M3C7 1700 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 GNAI3P08754 354 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 PRKAR2BP31323 418 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 CCT4P50991 539 aaKnown RBP4.57□□□□□ -1.68
CCNL1-204ENST00000464316 ZNF75DP51815 510 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 AXDND1Q5T1B0 1012 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-204ENST00000464316 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCNL1-204ENST00000464316 UPF3BQ9BZI7 483 aaKnown RBP4.57□□□□□ -1.68
CCNL1-204ENST00000464316 YY1AP1Q9H869 796 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 IQSEC2Q5JU85 1478 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 TOPAZ1Q8N9V7 1692 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 PIK3R4Q99570 1358 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 PTPRCP08575 1304 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 TET3O43151 1660 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 CLGNO14967 610 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 GNAI2P04899 355 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 SYT1P21579 422 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 CDC25BP30305 580 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 CYP2C19P33261 490 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 LARP1BQ659C4 914 aaKnown RBP4.57□□□□□ -1.68
CCNL1-204ENST00000464316 C16orf71Q8IYS4 520 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-204ENST00000464316 PLEKHF1Q96S99 279 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 ACBD3Q9H3P7 528 aa4.57□□□□□ -1.68
CCNL1-204ENST00000464316 ZNF215Q9UL58 517 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-204ENST00000464316 RPGRIP1LQ68CZ1 1315 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 NPHP3Q7Z494 1330 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 MYOM2P54296 1465 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 ERVK-7P63135 1459 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 PSMA5P28066 241 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 USP8P40818 1118 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 HNRNPH2P55795 449 aaKnown RBP4.56□□□□□ -1.68
CCNL1-204ENST00000464316 SNW1Q13573 536 aaKnown RBP4.56□□□□□ -1.68
CCNL1-204ENST00000464316 ANKRD1Q15327 319 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 JAKMIP3Q5VZ66 844 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 SIRT2Q8IXJ6 389 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 SLC26A8Q96RN1 970 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CHMP4AQ9BY43 222 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 FAM107BQ9H098 131 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 GGNBP2Q9H3C7 697 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 BRMS1Q9HCU9 246 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CYP46A1Q9Y6A2 500 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 RGS12O14924 1447 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 TULP2O00295 520 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 NPHP1O15259 732 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 EIF3JO75822 258 aaKnown RBP4.56□□□□□ -1.68
CCNL1-204ENST00000464316 MAPK8IP2Q13387 824 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-204ENST00000464316 ANO6Q4KMQ2 910 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CEP85Q6P2H3 762 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CCDC73Q6ZRK6 1079 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 SPATA32Q96LK8 384 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 STK31Q9BXU1 1019 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 RSPH14Q9UHP6 348 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CFAP45Q9UL16 551 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CHMP3Q9Y3E7 222 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 ARHGAP5Q13017 1502 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 ATP10BO94823 1461 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 UBR1Q8IWV7 1749 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 PTCH1Q13635 1447 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 FAM135BQ49AJ0 1406 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 A0A1B0GUL7 405 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 KIF3BO15066 747 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 SMARCA5O60264 1052 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-204ENST00000464316 SETQ01105 290 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-204ENST00000464316 HSP90B2PQ58FF3 399 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 MUM1L1Q5H9M0 696 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CNTROBQ8N137 903 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 CCDC150Q8NCX0 1101 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 MRFAP1L1Q96HT8 127 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 GPATCH3Q96I76 525 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 TRERF1Q96PN7 1200 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 KCNF1Q9H3M0 494 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 ANO10Q9NW15 660 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 RTL1A6NKG5 1358 aa4.56□□□□□ -1.68
CCNL1-204ENST00000464316 SPATA31D1Q6ZQQ2 1576 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CEP170BQ9Y4F5 1589 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CHMLP26374 656 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 TUBB4BP68371 445 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 GNL2Q13823 731 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ELF2Q15723 593 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 KMT5BQ4FZB7 885 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 HSP90AB4PQ58FF6 505 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 LUZP1Q86V48 1076 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 TEX2Q8IWB9 1127 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CEP57L1Q8IYX8 460 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 TDRD7Q8NHU6 1098 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CBX8Q9HC52 389 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 HDAC5Q9UQL6 1122 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 LRRFIP2Q9Y608 721 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 ADGRF5Q8IZF2 1346 aa4.55□□□□□ -1.68
CCNL1-204ENST00000464316 POLR3GO15318 223 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 SFPQP23246 707 aaKnown RBP eCLIP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CALRP27797 417 aaKnown RBP4.55□□□□□ -1.68
CCNL1-204ENST00000464316 CASQ1P31415 396 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms