RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 RC3H1Q5TC82 1133 aaKnown RBP27.54■■■□□ 2
CD58-204ENST00000464088 MAPK8IP3Q9UPT6 1336 aa27.54■■■□□ 2
CD58-204ENST00000464088 DPEP1P16444 411 aa27.53■■■□□ 2
CD58-204ENST00000464088 CCDC146Q8IYE0 955 aa27.53■■■□□ 2
CD58-204ENST00000464088 RUNDC1Q96C34 613 aa27.53■■■□□ 2
CD58-204ENST00000464088 CCDC87Q9NVE4 849 aa27.53■■■□□ 2
CD58-204ENST00000464088 CCER2I3L3R5 266 aa27.52■■■□□ 2
CD58-204ENST00000464088 NFE2L2Q16236 605 aa27.52■■■□□ 2
CD58-204ENST00000464088 IL17REQ8NFR9 667 aa27.52■■■□□ 2
CD58-204ENST00000464088 ARHGEF1Q92888 912 aaKnown RBP27.52■■■□□ 2
CD58-204ENST00000464088 SLC4A9Q96Q91 983 aa27.52■■■□□ 2
CD58-204ENST00000464088 GYS1P13807 737 aa27.51■■□□□ 1.99
CD58-204ENST00000464088 CEMIPQ8WUJ3 1361 aa27.5■■□□□ 1.99
CD58-204ENST00000464088 CNTNAP4Q9C0A0 1308 aa27.5■■□□□ 1.99
CD58-204ENST00000464088 KCNA3P22001 575 aa27.5■■□□□ 1.99
CD58-204ENST00000464088 SIPA1L3O60292 1781 aaPredicted RBP27.5■■□□□ 1.99
CD58-204ENST00000464088 HTATSF1O43719 755 aaKnown RBP27.49■■□□□ 1.99
CD58-204ENST00000464088 MIER1Q8N108 512 aa27.49■■□□□ 1.99
CD58-204ENST00000464088 JMYQ8N9B5 988 aa27.49■■□□□ 1.99
CD58-204ENST00000464088 MYH14Q7Z406 1995 aaKnown RBP27.49■■□□□ 1.99
CD58-204ENST00000464088 RPS6KA4O75676 772 aa27.48■■□□□ 1.99
CD58-204ENST00000464088 TMPOP42166 694 aaKnown RBP27.48■■□□□ 1.99
CD58-204ENST00000464088 CABP4P57796 275 aa27.48■■□□□ 1.99
CD58-204ENST00000464088 FSTL1Q12841 308 aa27.48■■□□□ 1.99
CD58-204ENST00000464088 C9orf131Q5VYM1 1079 aa27.48■■□□□ 1.99
CD58-204ENST00000464088 KLRG1Q96E93 195 aa27.48■■□□□ 1.99
CD58-204ENST00000464088 SLC52A2Q9HAB3 445 aa27.47■■□□□ 1.99
CD58-204ENST00000464088 PARP3Q9Y6F1 533 aa27.47■■□□□ 1.99
CD58-204ENST00000464088 RFC4P35249 363 aa27.46■■□□□ 1.99
CD58-204ENST00000464088 NFATC2IPQ8NCF5 419 aa27.46■■□□□ 1.99
CD58-204ENST00000464088 MCM10Q7L590 875 aa27.44■■□□□ 1.98
CD58-204ENST00000464088 C16orf71Q8IYS4 520 aaPredicted RBP27.44■■□□□ 1.98
CD58-204ENST00000464088 RTF1Q92541 710 aaKnown RBP27.44■■□□□ 1.98
CD58-204ENST00000464088 RBM42Q9BTD8 480 aaKnown RBP27.44■■□□□ 1.98
CD58-204ENST00000464088 PIM2Q9P1W9 311 aa27.44■■□□□ 1.98
CD58-204ENST00000464088 SBF1O95248 1867 aa27.44■■□□□ 1.98
CD58-204ENST00000464088 RIPK4P57078 832 aa27.43■■□□□ 1.98
CD58-204ENST00000464088 DCTN1Q14203 1278 aa27.43■■□□□ 1.98
CD58-204ENST00000464088 TNRC6CQ9HCJ0 1690 aaKnown RBP27.43■■□□□ 1.98
CD58-204ENST00000464088 KDM2BQ8NHM5 1336 aa27.42■■□□□ 1.98
CD58-204ENST00000464088 COL13A1Q5TAT6 717 aaPredicted RBP27.42■■□□□ 1.98
CD58-204ENST00000464088 RRP7AQ9Y3A4 280 aaKnown RBP27.42■■□□□ 1.98
CD58-204ENST00000464088 KCPQ6ZWJ8 1503 aa27.41■■□□□ 1.98
CD58-204ENST00000464088 APAF1O14727 1248 aa27.41■■□□□ 1.98
CD58-204ENST00000464088 HTRA3P83110 453 aa27.41■■□□□ 1.98
CD58-204ENST00000464088 FAM9BQ8IZU0 186 aa27.4■■□□□ 1.98
CD58-204ENST00000464088 TEFQ10587 303 aa27.39■■□□□ 1.98
CD58-204ENST00000464088 DALRD3Q5D0E6 543 aaKnown RBP27.39■■□□□ 1.98
CD58-204ENST00000464088 PCNTO95613 3336 aa27.38■■□□□ 1.97
CD58-204ENST00000464088 TRIM35Q9UPQ4 493 aa27.38■■□□□ 1.97
CD58-204ENST00000464088 THUMPD2Q9BTF0 503 aaKnown RBP27.37■■□□□ 1.97
CD58-204ENST00000464088 UBR2Q8IWV8 1755 aa27.37■■□□□ 1.97
CD58-204ENST00000464088 LMOD3Q0VAK6 560 aa27.36■■□□□ 1.97
CD58-204ENST00000464088 NEUROD2Q15784 382 aa27.36■■□□□ 1.97
CD58-204ENST00000464088 RNF181Q9P0P0 153 aa27.36■■□□□ 1.97
CD58-204ENST00000464088 RRAGCQ9HB90 399 aa27.35■■□□□ 1.97
CD58-204ENST00000464088 USP42Q9H9J4 1324 aaKnown RBP27.35■■□□□ 1.97
CD58-204ENST00000464088 DDR1Q08345 913 aa27.34■■□□□ 1.97
CD58-204ENST00000464088 FKBP8Q14318 412 aa27.34■■□□□ 1.97
CD58-204ENST00000464088 TJP1Q07157 1748 aa27.33■■□□□ 1.97
CD58-204ENST00000464088 CRKLP46109 303 aaKnown RBP27.33■■□□□ 1.97
CD58-204ENST00000464088 SLC39A6Q13433 755 aa27.33■■□□□ 1.97
CD58-204ENST00000464088 SMC1BQ8NDV3 1235 aa27.32■■□□□ 1.96
CD58-204ENST00000464088 SRP68Q9UHB9 627 aaKnown RBP27.32■■□□□ 1.96
CD58-204ENST00000464088 TAF7Q15545 349 aaPredicted RBP27.31■■□□□ 1.96
CD58-204ENST00000464088 ZC3H4Q9UPT8 1303 aaKnown RBP27.31■■□□□ 1.96
CD58-204ENST00000464088 KDM3BQ7LBC6 1761 aa27.3■■□□□ 1.96
CD58-204ENST00000464088 TM4SF1P30408 202 aa27.3■■□□□ 1.96
CD58-204ENST00000464088 NCBP3Q53F19 620 aaKnown RBP27.3■■□□□ 1.96
CD58-204ENST00000464088 BTBD11A6QL63 1104 aa27.29■■□□□ 1.96
CD58-204ENST00000464088 PTCD1O75127 700 aaKnown RBP27.29■■□□□ 1.96
CD58-204ENST00000464088 CHRNA5P30532 468 aa27.29■■□□□ 1.96
CD58-204ENST00000464088 ZNF790Q6PG37 636 aa27.29■■□□□ 1.96
CD58-204ENST00000464088 POLRMTO00411 1230 aaKnown RBP27.28■■□□□ 1.96
CD58-204ENST00000464088 KCNQ3O43525 872 aa27.27■■□□□ 1.96
CD58-204ENST00000464088 CCDC27Q2M243 656 aa27.27■■□□□ 1.96
CD58-204ENST00000464088 TNS4Q8IZW8 715 aa27.27■■□□□ 1.96
CD58-204ENST00000464088 PRELPP51888 382 aa27.26■■□□□ 1.95
CD58-204ENST00000464088 DLEC1Q9Y238 1755 aa27.25■■□□□ 1.95
CD58-204ENST00000464088 INTS5Q6P9B9 1019 aaKnown RBP27.25■■□□□ 1.95
CD58-204ENST00000464088 AFDNP55196 1824 aaKnown RBP27.25■■□□□ 1.95
CD58-204ENST00000464088 NRXN2Q9P2S2 1712 aa27.24■■□□□ 1.95
CD58-204ENST00000464088 TTC5Q8N0Z6 440 aa27.24■■□□□ 1.95
CD58-204ENST00000464088 ZNF496Q96IT1 587 aaPredicted RBP27.24■■□□□ 1.95
CD58-204ENST00000464088 MIS18AQ9NYP9 233 aa27.24■■□□□ 1.95
CD58-204ENST00000464088 BABAM1Q9NWV8 329 aa27.22■■□□□ 1.95
CD58-204ENST00000464088 GLTPD2A6NH11 291 aa27.21■■□□□ 1.95
CD58-204ENST00000464088 CAPN15O75808 1086 aa27.21■■□□□ 1.95
CD58-204ENST00000464088 VEGFAP15692 232 aaPredicted RBP27.21■■□□□ 1.95
CD58-204ENST00000464088 WWC1Q8IX03 1113 aa27.21■■□□□ 1.95
CD58-204ENST00000464088 VSIG10Q8N0Z9 540 aa27.21■■□□□ 1.95
CD58-204ENST00000464088 CCDC88AQ3V6T2 1871 aa27.21■■□□□ 1.95
CD58-204ENST00000464088 HEG1Q9ULI3 1381 aa27.21■■□□□ 1.95
CD58-204ENST00000464088 LMNB1P20700 586 aa27.2■■□□□ 1.94
CD58-204ENST00000464088 RASSF7Q02833 373 aa27.2■■□□□ 1.94
CD58-204ENST00000464088 CHL1O00533 1208 aa27.19■■□□□ 1.94
CD58-204ENST00000464088 ZPR1O75312 459 aa27.19■■□□□ 1.94
CD58-204ENST00000464088 USPL1Q5W0Q7 1092 aa27.19■■□□□ 1.94
CD58-204ENST00000464088 NGEFQ8N5V2 710 aa27.19■■□□□ 1.94
CD58-204ENST00000464088 FMNL2Q96PY5 1086 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms