RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 TRIM35Q9UPQ4 493 aa34.27■■■■□ 3.08
SURF1-203ENST00000463965 MYH14Q7Z406 1995 aaKnown RBP34.26■■■■□ 3.08
SURF1-203ENST00000463965 ARHGEF1Q92888 912 aaKnown RBP34.26■■■■□ 3.08
SURF1-203ENST00000463965 TSPYL4Q9UJ04 414 aa34.26■■■■□ 3.08
SURF1-203ENST00000463965 SGIP1Q9BQI5 828 aa34.25■■■■□ 3.07
SURF1-203ENST00000463965 MSL1Q68DK7 614 aa34.24■■■■□ 3.07
SURF1-203ENST00000463965 ARXQ96QS3 562 aa34.23■■■■□ 3.07
SURF1-203ENST00000463965 ZBTB1Q9Y2K1 713 aa34.22■■■■□ 3.07
SURF1-203ENST00000463965 CANXP27824 592 aaKnown RBP34.21■■■■□ 3.07
SURF1-203ENST00000463965 CALD1Q05682 793 aaKnown RBP34.21■■■■□ 3.07
SURF1-203ENST00000463965 FAM9BQ8IZU0 186 aa34.21■■■■□ 3.07
SURF1-203ENST00000463965 SOS1Q07889 1333 aaPredicted RBP34.21■■■■□ 3.07
SURF1-203ENST00000463965 NPM2Q86SE8 214 aaKnown RBP34.2■■■■□ 3.07
SURF1-203ENST00000463965 EIF4A1P60842 406 aaKnown RBP34.19■■■■□ 3.06
SURF1-203ENST00000463965 LAS1LQ9Y4W2 734 aaKnown RBP34.19■■■■□ 3.06
SURF1-203ENST00000463965 USP16Q9Y5T5 823 aa34.19■■■■□ 3.06
SURF1-203ENST00000463965 NLGN1Q8N2Q7 840 aa34.17■■■■□ 3.06
SURF1-203ENST00000463965 KDM3BQ7LBC6 1761 aa34.16■■■■□ 3.06
SURF1-203ENST00000463965 A0A087WZG4 1122 aa34.16■■■■□ 3.06
SURF1-203ENST00000463965 ZPR1O75312 459 aa34.16■■■■□ 3.06
SURF1-203ENST00000463965 DIEXFQ68CQ4 756 aaKnown RBP34.16■■■■□ 3.06
SURF1-203ENST00000463965 PRAMEF22A3QJZ6 481 aa34.15■■■■□ 3.06
SURF1-203ENST00000463965 A1BGP04217 495 aa34.15■■■■□ 3.06
SURF1-203ENST00000463965 COL15A1P39059 1388 aa34.14■■■■□ 3.06
SURF1-203ENST00000463965 CHL1O00533 1208 aa34.14■■■■□ 3.06
SURF1-203ENST00000463965 GIGYF1O75420 1035 aaPredicted RBP34.14■■■■□ 3.06
SURF1-203ENST00000463965 IL6STP40189 918 aaPredicted RBP34.14■■■■□ 3.06
SURF1-203ENST00000463965 CFAP44Q96MT7 982 aa34.13■■■■□ 3.05
SURF1-203ENST00000463965 ZNF330Q9Y3S2 320 aaPredicted RBP34.13■■■■□ 3.05
SURF1-203ENST00000463965 COL24A1Q17RW2 1714 aa34.13■■■■□ 3.05
SURF1-203ENST00000463965 USP42Q9H9J4 1324 aaKnown RBP34.12■■■■□ 3.05
SURF1-203ENST00000463965 CCER2I3L3R5 266 aa34.12■■■■□ 3.05
SURF1-203ENST00000463965 GYS1P13807 737 aa34.12■■■■□ 3.05
SURF1-203ENST00000463965 EIF5P55010 431 aaKnown RBP34.12■■■■□ 3.05
SURF1-203ENST00000463965 CCDC27Q2M243 656 aa34.11■■■■□ 3.05
SURF1-203ENST00000463965 NCBP3Q53F19 620 aaKnown RBP34.11■■■■□ 3.05
SURF1-203ENST00000463965 SRP68Q9UHB9 627 aaKnown RBP34.11■■■■□ 3.05
SURF1-203ENST00000463965 FHDC1Q9C0D6 1143 aaPredicted RBP34.1■■■■□ 3.05
SURF1-203ENST00000463965 NARFQ9UHQ1 456 aa34.1■■■■□ 3.05
SURF1-203ENST00000463965 GNAI1P63096 354 aa34.09■■■■□ 3.05
SURF1-203ENST00000463965 KLHL34Q8N239 644 aa34.09■■■■□ 3.05
SURF1-203ENST00000463965 IFT57Q9NWB7 429 aa34.08■■■■□ 3.05
SURF1-203ENST00000463965 MMP10P09238 476 aa34.07■■■■□ 3.04
SURF1-203ENST00000463965 USPL1Q5W0Q7 1092 aa34.07■■■■□ 3.04
SURF1-203ENST00000463965 C4AP0C0L4 1744 aa34.06■■■■□ 3.04
SURF1-203ENST00000463965 SYT17Q9BSW7 474 aa34.05■■■■□ 3.04
SURF1-203ENST00000463965 SENP3-EIF4A1A0A087X0R7 540 aa34.04■■■■□ 3.04
SURF1-203ENST00000463965 PIP4K2AP48426 406 aaPredicted RBP34.03■■■■□ 3.04
SURF1-203ENST00000463965 FKBP8Q14318 412 aa34.03■■■■□ 3.04
SURF1-203ENST00000463965 WWC1Q8IX03 1113 aa34.03■■■■□ 3.04
SURF1-203ENST00000463965 NGEFQ8N5V2 710 aa34.03■■■■□ 3.04
SURF1-203ENST00000463965 PARP3Q9Y6F1 533 aa34.03■■■■□ 3.04
SURF1-203ENST00000463965 ZNF853P0CG23 659 aa34.02■■■■□ 3.04
SURF1-203ENST00000463965 MBIPQ9NS73 344 aa34.02■■■■□ 3.04
SURF1-203ENST00000463965 TBC1D2BQ9UPU7 963 aa34.01■■■■□ 3.03
SURF1-203ENST00000463965 SALL2Q9Y467 1007 aaPredicted RBP34.01■■■■□ 3.03
SURF1-203ENST00000463965 NBPF26B4DH59 902 aa34■■■■□ 3.03
SURF1-203ENST00000463965 EIF2S2P20042 333 aaKnown RBP34■■■■□ 3.03
SURF1-203ENST00000463965 NBPF10Q6P3W6 841 aaKnown RBP34■■■■□ 3.03
SURF1-203ENST00000463965 DZIP3Q86Y13 1208 aaKnown RBP34■■■■□ 3.03
SURF1-203ENST00000463965 NBPF15Q8N660 670 aa34■■■■□ 3.03
SURF1-203ENST00000463965 LAMB4A4D0S4 1761 aa34■■■■□ 3.03
SURF1-203ENST00000463965 ERBB4Q15303 1308 aa34■■■■□ 3.03
SURF1-203ENST00000463965 DCAF8L1A6NGE4 600 aa33.99■■■■□ 3.03
SURF1-203ENST00000463965 CD2APQ9Y5K6 639 aa33.98■■■■□ 3.03
SURF1-203ENST00000463965 HOXB7P09629 217 aa33.96■■■■□ 3.03
SURF1-203ENST00000463965 IL16Q14005 1332 aa33.96■■■■□ 3.03
SURF1-203ENST00000463965 MYL6BP14649 208 aa33.94■■■■□ 3.02
SURF1-203ENST00000463965 TM4SF1P30408 202 aa33.94■■■■□ 3.02
SURF1-203ENST00000463965 KRT24Q2M2I5 525 aa33.94■■■■□ 3.02
SURF1-203ENST00000463965 WDR63Q8IWG1 891 aa33.94■■■■□ 3.02
SURF1-203ENST00000463965 BCL2L12Q9HB09 334 aa33.94■■■■□ 3.02
SURF1-203ENST00000463965 CAMTA2O94983 1202 aa33.93■■■■□ 3.02
SURF1-203ENST00000463965 ZNF652Q9Y2D9 606 aa33.93■■■■□ 3.02
SURF1-203ENST00000463965 DUSP27Q5VZP5 1158 aa33.92■■■■□ 3.02
SURF1-203ENST00000463965 MIER1Q8N108 512 aa33.92■■■■□ 3.02
SURF1-203ENST00000463965 NFIXQ14938 502 aa33.91■■■■□ 3.02
SURF1-203ENST00000463965 HDGFL1Q5TGJ6 251 aa33.9■■■■□ 3.02
SURF1-203ENST00000463965 CLEC4GQ6UXB4 293 aa33.9■■■■□ 3.02
SURF1-203ENST00000463965 NECTIN2Q92692 538 aa33.9■■■■□ 3.02
SURF1-203ENST00000463965 DDR1Q08345 913 aa33.89■■■■□ 3.02
SURF1-203ENST00000463965 KIF6Q6ZMV9 814 aa33.89■■■■□ 3.02
SURF1-203ENST00000463965 CHMP4AQ9BY43 222 aa33.89■■■■□ 3.02
SURF1-203ENST00000463965 POLRMTO00411 1230 aaKnown RBP33.88■■■■□ 3.01
SURF1-203ENST00000463965 RGL2O15211 777 aa33.88■■■■□ 3.01
SURF1-203ENST00000463965 BICDL1Q6ZP65 573 aa33.88■■■■□ 3.01
SURF1-203ENST00000463965 NLGN2Q8NFZ4 835 aa33.87■■■■□ 3.01
SURF1-203ENST00000463965 TBC1D9BQ66K14 1250 aa33.86■■■■□ 3.01
SURF1-203ENST00000463965 TSR2Q969E8 191 aaKnown RBP33.86■■■■□ 3.01
SURF1-203ENST00000463965 SETDB2Q96T68 719 aa33.86■■■■□ 3.01
SURF1-203ENST00000463965 DDX21Q9NR30 783 aaKnown RBP eCLIP33.85■■■■□ 3.01
SURF1-203ENST00000463965 SCN7AQ01118 1682 aa33.84■■■■□ 3.01
SURF1-203ENST00000463965 ELL2O00472 640 aaPredicted RBP33.84■■■■□ 3.01
SURF1-203ENST00000463965 SERPINB2P05120 415 aa33.84■■■■□ 3.01
SURF1-203ENST00000463965 PDIA6Q15084 440 aa33.84■■■■□ 3.01
SURF1-203ENST00000463965 ERVV-1B6SEH8 477 aa33.83■■■■□ 3.01
SURF1-203ENST00000463965 MAP3K15Q6ZN16 1313 aa33.82■■■■□ 3.01
SURF1-203ENST00000463965 C8orf58Q8NAV2 365 aa33.82■■■■□ 3
SURF1-203ENST00000463965 DBF4Q9UBU7 674 aaPredicted RBP33.82■■■■□ 3
SURF1-203ENST00000463965 TGFB2P61812 414 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms