RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
XRN1-203ENST00000463916 ADAMTS8Q9UP79 889 aa17.17■□□□□ 0.34
XRN1-203ENST00000463916 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
XRN1-203ENST00000463916 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
XRN1-203ENST00000463916 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
XRN1-203ENST00000463916 STARD3NLO95772 234 aa17.16■□□□□ 0.34
XRN1-203ENST00000463916 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
XRN1-203ENST00000463916 FKBP8Q14318 412 aa17.16■□□□□ 0.34
XRN1-203ENST00000463916 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
XRN1-203ENST00000463916 USP16Q9Y5T5 823 aa17.15■□□□□ 0.34
XRN1-203ENST00000463916 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
XRN1-203ENST00000463916 A1BGP04217 495 aa17.14■□□□□ 0.33
XRN1-203ENST00000463916 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
XRN1-203ENST00000463916 RIPK4P57078 832 aa17.14■□□□□ 0.33
XRN1-203ENST00000463916 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
XRN1-203ENST00000463916 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
XRN1-203ENST00000463916 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
XRN1-203ENST00000463916 USPL1Q5W0Q7 1092 aa17.14■□□□□ 0.33
XRN1-203ENST00000463916 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
XRN1-203ENST00000463916 COL15A1P39059 1388 aa17.13■□□□□ 0.33
XRN1-203ENST00000463916 EIF5P55010 431 aaKnown RBP17.13■□□□□ 0.33
XRN1-203ENST00000463916 PIP4K2AP48426 406 aaPredicted RBP17.12■□□□□ 0.33
XRN1-203ENST00000463916 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
XRN1-203ENST00000463916 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
XRN1-203ENST00000463916 ZPR1O75312 459 aa17.11■□□□□ 0.33
XRN1-203ENST00000463916 DDR1Q08345 913 aa17.11■□□□□ 0.33
XRN1-203ENST00000463916 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
XRN1-203ENST00000463916 GPR162Q16538 588 aa17.11■□□□□ 0.33
XRN1-203ENST00000463916 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
XRN1-203ENST00000463916 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
XRN1-203ENST00000463916 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
XRN1-203ENST00000463916 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.33
XRN1-203ENST00000463916 TM4SF1P30408 202 aa17.1■□□□□ 0.33
XRN1-203ENST00000463916 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
XRN1-203ENST00000463916 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
XRN1-203ENST00000463916 KDM3BQ7LBC6 1761 aa17.09■□□□□ 0.33
XRN1-203ENST00000463916 IL6STP40189 918 aaPredicted RBP17.09■□□□□ 0.33
XRN1-203ENST00000463916 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
XRN1-203ENST00000463916 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
XRN1-203ENST00000463916 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
XRN1-203ENST00000463916 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.33
XRN1-203ENST00000463916 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.33
XRN1-203ENST00000463916 POLRMTO00411 1230 aaKnown RBP17.08■□□□□ 0.32
XRN1-203ENST00000463916 NFIXQ14938 502 aa17.08■□□□□ 0.32
XRN1-203ENST00000463916 NBPF26B4DH59 902 aa17.07■□□□□ 0.32
XRN1-203ENST00000463916 NBPF10Q6P3W6 841 aaKnown RBP17.07■□□□□ 0.32
XRN1-203ENST00000463916 NBPF15Q8N660 670 aa17.07■□□□□ 0.32
XRN1-203ENST00000463916 C10orf71Q711Q0 1435 aa17.07■□□□□ 0.32
XRN1-203ENST00000463916 GIGYF1O75420 1035 aaPredicted RBP17.06■□□□□ 0.32
XRN1-203ENST00000463916 YY1P25490 414 aa17.06■□□□□ 0.32
XRN1-203ENST00000463916 KIF13BQ9NQT8 1826 aa17.06■□□□□ 0.32
XRN1-203ENST00000463916 A0A0G2JLW4 131 aa17.05■□□□□ 0.32
XRN1-203ENST00000463916 TSPYL4Q9UJ04 414 aa17.05■□□□□ 0.32
XRN1-203ENST00000463916 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
XRN1-203ENST00000463916 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
XRN1-203ENST00000463916 A0A087WZG4 1122 aa17.05■□□□□ 0.32
XRN1-203ENST00000463916 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
XRN1-203ENST00000463916 APAF1O14727 1248 aa17.04■□□□□ 0.32
XRN1-203ENST00000463916 ANP32CO43423 234 aa17.03■□□□□ 0.32
XRN1-203ENST00000463916 CAMTA2O94983 1202 aa17.03■□□□□ 0.32
XRN1-203ENST00000463916 TBC1D9BQ66K14 1250 aa17.03■□□□□ 0.32
XRN1-203ENST00000463916 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
XRN1-203ENST00000463916 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
XRN1-203ENST00000463916 TGFB2P61812 414 aa17.03■□□□□ 0.32
XRN1-203ENST00000463916 DZIP3Q86Y13 1208 aaKnown RBP17.03■□□□□ 0.32
XRN1-203ENST00000463916 DPEP1P16444 411 aa17.02■□□□□ 0.32
XRN1-203ENST00000463916 KCNA3P22001 575 aa17.02■□□□□ 0.32
XRN1-203ENST00000463916 SERPINB2P05120 415 aa17.01■□□□□ 0.31
XRN1-203ENST00000463916 AFDNP55196 1824 aaKnown RBP17.01■□□□□ 0.31
XRN1-203ENST00000463916 SCN7AQ01118 1682 aa17.01■□□□□ 0.31
XRN1-203ENST00000463916 SENP3-EIF4A1A0A087X0R7 540 aa17.01■□□□□ 0.31
XRN1-203ENST00000463916 CHL1O00533 1208 aa17.01■□□□□ 0.31
XRN1-203ENST00000463916 LAMB4A4D0S4 1761 aa17.01■□□□□ 0.31
XRN1-203ENST00000463916 GRIN3BO60391 1043 aa17■□□□□ 0.31
XRN1-203ENST00000463916 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
XRN1-203ENST00000463916 BABAM1Q9NWV8 329 aa17■□□□□ 0.31
XRN1-203ENST00000463916 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
XRN1-203ENST00000463916 KRT24Q2M2I5 525 aa17■□□□□ 0.31
XRN1-203ENST00000463916 MRS2Q9HD23 443 aa17■□□□□ 0.31
XRN1-203ENST00000463916 CHD4Q14839 1912 aa17■□□□□ 0.31
XRN1-203ENST00000463916 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
XRN1-203ENST00000463916 CHRNA5P30532 468 aa16.99■□□□□ 0.31
XRN1-203ENST00000463916 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
XRN1-203ENST00000463916 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
XRN1-203ENST00000463916 BCORQ6W2J9 1755 aa16.98■□□□□ 0.31
XRN1-203ENST00000463916 MYL6BP14649 208 aa16.97■□□□□ 0.31
XRN1-203ENST00000463916 CCDC24Q8N4L8 307 aa16.97■□□□□ 0.31
XRN1-203ENST00000463916 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
XRN1-203ENST00000463916 HLFQ16534 295 aa16.97■□□□□ 0.31
XRN1-203ENST00000463916 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
XRN1-203ENST00000463916 BRCA1P38398 1863 aaKnown RBP16.96■□□□□ 0.31
XRN1-203ENST00000463916 PDIA6Q15084 440 aa16.96■□□□□ 0.31
XRN1-203ENST00000463916 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
XRN1-203ENST00000463916 SETDB2Q96T68 719 aa16.96■□□□□ 0.31
XRN1-203ENST00000463916 CLEC4GQ6UXB4 293 aa16.95■□□□□ 0.3
XRN1-203ENST00000463916 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
XRN1-203ENST00000463916 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
XRN1-203ENST00000463916 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
XRN1-203ENST00000463916 PROSER3Q2NL68 480 aa16.95■□□□□ 0.3
XRN1-203ENST00000463916 PRR5LQ6MZQ0 368 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms