RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 SPINK5Q9NQ38 1064 aaPredicted RBP26.34■■□□□ 1.81
NUP43-205ENST00000463048 CCDC87Q9NVE4 849 aa26.34■■□□□ 1.81
NUP43-205ENST00000463048 CICQ96RK0 1608 aaPredicted RBP26.34■■□□□ 1.81
NUP43-205ENST00000463048 CNTNAP4Q9C0A0 1308 aa26.34■■□□□ 1.81
NUP43-205ENST00000463048 MYH14Q7Z406 1995 aaKnown RBP26.33■■□□□ 1.81
NUP43-205ENST00000463048 GIGYF1O75420 1035 aaPredicted RBP26.33■■□□□ 1.81
NUP43-205ENST00000463048 INTS5Q6P9B9 1019 aaKnown RBP26.33■■□□□ 1.81
NUP43-205ENST00000463048 NECTIN2Q92692 538 aa26.33■■□□□ 1.81
NUP43-205ENST00000463048 TEX13AQ9BXU3 409 aaPredicted RBP26.33■■□□□ 1.81
NUP43-205ENST00000463048 ZNF330Q9Y3S2 320 aaPredicted RBP26.33■■□□□ 1.81
NUP43-205ENST00000463048 PNPLA7Q6ZV29 1317 aa26.33■■□□□ 1.81
NUP43-205ENST00000463048 ELL2O00472 640 aaPredicted RBP26.32■■□□□ 1.8
NUP43-205ENST00000463048 A1BGP04217 495 aa26.32■■□□□ 1.8
NUP43-205ENST00000463048 HMGB2P26583 209 aaKnown RBP26.32■■□□□ 1.8
NUP43-205ENST00000463048 ZBTB1Q9Y2K1 713 aa26.32■■□□□ 1.8
NUP43-205ENST00000463048 EIF2S2P20042 333 aaKnown RBP26.31■■□□□ 1.8
NUP43-205ENST00000463048 RC3H1Q5TC82 1133 aaKnown RBP26.31■■□□□ 1.8
NUP43-205ENST00000463048 RTCBQ9Y3I0 505 aaKnown RBP26.31■■□□□ 1.8
NUP43-205ENST00000463048 UBR3Q6ZT12 1888 aa26.31■■□□□ 1.8
NUP43-205ENST00000463048 IL16Q14005 1332 aa26.31■■□□□ 1.8
NUP43-205ENST00000463048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.3■■□□□ 1.8
NUP43-205ENST00000463048 COL23A1Q86Y22 540 aaPredicted RBP26.3■■□□□ 1.8
NUP43-205ENST00000463048 ZNF521Q96K83 1311 aa26.3■■□□□ 1.8
NUP43-205ENST00000463048 FANCIQ9NVI1 1328 aa26.29■■□□□ 1.8
NUP43-205ENST00000463048 LAMB4A4D0S4 1761 aa26.28■■□□□ 1.8
NUP43-205ENST00000463048 RPS6KA4O75676 772 aa26.28■■□□□ 1.8
NUP43-205ENST00000463048 ZBTB7AO95365 584 aa26.27■■□□□ 1.8
NUP43-205ENST00000463048 GOLGA2Q08379 1002 aa26.27■■□□□ 1.8
NUP43-205ENST00000463048 DUSP27Q5VZP5 1158 aa26.27■■□□□ 1.8
NUP43-205ENST00000463048 C8orf58Q8NAV2 365 aa26.27■■□□□ 1.8
NUP43-205ENST00000463048 ARXQ96QS3 562 aa26.27■■□□□ 1.8
NUP43-205ENST00000463048 TRAPPC3LQ5T215 181 aa26.26■■□□□ 1.79
NUP43-205ENST00000463048 CDCA7LQ96GN5 454 aa26.26■■□□□ 1.79
NUP43-205ENST00000463048 QSER1Q2KHR3 1735 aa26.25■■□□□ 1.79
NUP43-205ENST00000463048 SSFA2P28290 1259 aa26.25■■□□□ 1.79
NUP43-205ENST00000463048 MYH16Q9H6N6 1097 aa26.25■■□□□ 1.79
NUP43-205ENST00000463048 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
NUP43-205ENST00000463048 TSPYL6Q8N831 410 aa26.24■■□□□ 1.79
NUP43-205ENST00000463048 ARHGEF1Q92888 912 aaKnown RBP26.24■■□□□ 1.79
NUP43-205ENST00000463048 SOS1Q07889 1333 aaPredicted RBP26.23■■□□□ 1.79
NUP43-205ENST00000463048 MYL6BP14649 208 aa26.23■■□□□ 1.79
NUP43-205ENST00000463048 MSL1Q68DK7 614 aa26.23■■□□□ 1.79
NUP43-205ENST00000463048 FLAD1Q8NFF5 587 aa26.23■■□□□ 1.79
NUP43-205ENST00000463048 ATF5Q9Y2D1 282 aaPredicted RBP26.23■■□□□ 1.79
NUP43-205ENST00000463048 NBPF26B4DH59 902 aa26.22■■□□□ 1.79
NUP43-205ENST00000463048 ANXA1P04083 346 aa26.22■■□□□ 1.79
NUP43-205ENST00000463048 RFC4P35249 363 aa26.22■■□□□ 1.79
NUP43-205ENST00000463048 EXOSC9Q06265 439 aaKnown RBP26.22■■□□□ 1.79
NUP43-205ENST00000463048 NBPF10Q6P3W6 841 aaKnown RBP26.22■■□□□ 1.79
NUP43-205ENST00000463048 NBPF15Q8N660 670 aa26.22■■□□□ 1.79
NUP43-205ENST00000463048 COL15A1P39059 1388 aa26.21■■□□□ 1.79
NUP43-205ENST00000463048 HDGFL1Q5TGJ6 251 aa26.21■■□□□ 1.79
NUP43-205ENST00000463048 SRP68Q9UHB9 627 aaKnown RBP26.21■■□□□ 1.79
NUP43-205ENST00000463048 NPM2Q86SE8 214 aaKnown RBP26.2■■□□□ 1.78
NUP43-205ENST00000463048 C4AP0C0L4 1744 aa26.19■■□□□ 1.78
NUP43-205ENST00000463048 E9PSI1 815 aa26.19■■□□□ 1.78
NUP43-205ENST00000463048 TCERG1O14776 1098 aaKnown RBP26.19■■□□□ 1.78
NUP43-205ENST00000463048 SLFN5Q08AF3 891 aa26.19■■□□□ 1.78
NUP43-205ENST00000463048 YTHDC1Q96MU7 727 aaKnown RBP26.19■■□□□ 1.78
NUP43-205ENST00000463048 IL6STP40189 918 aaPredicted RBP26.18■■□□□ 1.78
NUP43-205ENST00000463048 EIF5P55010 431 aaKnown RBP26.18■■□□□ 1.78
NUP43-205ENST00000463048 PROSER3Q2NL68 480 aa26.18■■□□□ 1.78
NUP43-205ENST00000463048 TWISTNBQ3B726 338 aaPredicted RBP26.18■■□□□ 1.78
NUP43-205ENST00000463048 TBC1D2BQ9UPU7 963 aa26.18■■□□□ 1.78
NUP43-205ENST00000463048 ADRA2BP18089 450 aa26.17■■□□□ 1.78
NUP43-205ENST00000463048 CHPF2Q9P2E5 772 aa26.17■■□□□ 1.78
NUP43-205ENST00000463048 ZPR1O75312 459 aa26.15■■□□□ 1.78
NUP43-205ENST00000463048 HOXB7P09629 217 aa26.15■■□□□ 1.78
NUP43-205ENST00000463048 USPL1Q5W0Q7 1092 aa26.15■■□□□ 1.78
NUP43-205ENST00000463048 PDIA6Q15084 440 aa26.14■■□□□ 1.78
NUP43-205ENST00000463048 MTFR1LQ9H019 292 aa26.14■■□□□ 1.78
NUP43-205ENST00000463048 A0A087WZG4 1122 aa26.13■■□□□ 1.77
NUP43-205ENST00000463048 DZIP3Q86Y13 1208 aaKnown RBP26.13■■□□□ 1.77
NUP43-205ENST00000463048 SLC16A10Q8TF71 515 aa26.13■■□□□ 1.77
NUP43-205ENST00000463048 USP42Q9H9J4 1324 aaKnown RBP26.13■■□□□ 1.77
NUP43-205ENST00000463048 AIMP1Q12904 312 aaKnown RBP26.12■■□□□ 1.77
NUP43-205ENST00000463048 SPON1Q9HCB6 807 aa26.12■■□□□ 1.77
NUP43-205ENST00000463048 ZBED9Q6R2W3 1325 aa26.12■■□□□ 1.77
NUP43-205ENST00000463048 GYS1P13807 737 aa26.11■■□□□ 1.77
NUP43-205ENST00000463048 TTLL7Q6ZT98 887 aa26.11■■□□□ 1.77
NUP43-205ENST00000463048 NARFQ9UHQ1 456 aa26.11■■□□□ 1.77
NUP43-205ENST00000463048 ERBB4Q15303 1308 aa26.11■■□□□ 1.77
NUP43-205ENST00000463048 CCDC30Q5VVM6 783 aa26.1■■□□□ 1.77
NUP43-205ENST00000463048 DDX21Q9NR30 783 aaKnown RBP eCLIP26.1■■□□□ 1.77
NUP43-205ENST00000463048 VAMP4O75379 141 aa26.09■■□□□ 1.77
NUP43-205ENST00000463048 FKBP8Q14318 412 aa26.09■■□□□ 1.77
NUP43-205ENST00000463048 XAGE3Q8WTP9 111 aa26.09■■□□□ 1.77
NUP43-205ENST00000463048 DBF4Q9UBU7 674 aaPredicted RBP26.09■■□□□ 1.77
NUP43-205ENST00000463048 BICDL1Q6ZP65 573 aa26.08■■□□□ 1.77
NUP43-205ENST00000463048 CAMTA2O94983 1202 aa26.07■■□□□ 1.76
NUP43-205ENST00000463048 KIF6Q6ZMV9 814 aa26.07■■□□□ 1.76
NUP43-205ENST00000463048 COPS6Q7L5N1 327 aa26.07■■□□□ 1.76
NUP43-205ENST00000463048 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
NUP43-205ENST00000463048 ZBTB3Q9H5J0 574 aa26.07■■□□□ 1.76
NUP43-205ENST00000463048 BCL2L12Q9HB09 334 aa26.07■■□□□ 1.76
NUP43-205ENST00000463048 LRP10Q7Z4F1 713 aa26.06■■□□□ 1.76
NUP43-205ENST00000463048 STK31Q9BXU1 1019 aa26.06■■□□□ 1.76
NUP43-205ENST00000463048 PHAXQ9H814 394 aaKnown RBP26.06■■□□□ 1.76
NUP43-205ENST00000463048 POLD1P28340 1107 aa26.05■■□□□ 1.76
NUP43-205ENST00000463048 PTGER2P43116 358 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms