RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 DHX37Q8IY37 1157 aaKnown RBP11.52□□□□□ -0.56
DDX39B-215ENST00000462256 UTP14AQ9BVJ6 771 aaKnown RBP11.52□□□□□ -0.56
DDX39B-215ENST00000462256 ARHGAP27Q6ZUM4 889 aa11.52□□□□□ -0.57
DDX39B-215ENST00000462256 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
DDX39B-215ENST00000462256 CWC25Q9NXE8 425 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-215ENST00000462256 MMP10P09238 476 aa11.51□□□□□ -0.57
DDX39B-215ENST00000462256 SLC15A2Q16348 729 aa11.51□□□□□ -0.57
DDX39B-215ENST00000462256 SLC16A10Q8TF71 515 aa11.51□□□□□ -0.57
DDX39B-215ENST00000462256 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-215ENST00000462256 IL17REQ8NFR9 667 aa11.51□□□□□ -0.57
DDX39B-215ENST00000462256 MBIPQ9NS73 344 aa11.51□□□□□ -0.57
DDX39B-215ENST00000462256 PPLO60437 1756 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 PARP10Q53GL7 1025 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 CHPF2Q9P2E5 772 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
DDX39B-215ENST00000462256 GNL3LQ9NVN8 582 aaKnown RBP11.5□□□□□ -0.57
DDX39B-215ENST00000462256 PDE6BP35913 854 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 DNAAF4Q8WXU2 420 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDX39B-215ENST00000462256 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
DDX39B-215ENST00000462256 PARD3Q8TEW0 1356 aa11.49□□□□□ -0.57
DDX39B-215ENST00000462256 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
DDX39B-215ENST00000462256 BABAM1Q9NWV8 329 aa11.49□□□□□ -0.57
DDX39B-215ENST00000462256 CCT4P50991 539 aaKnown RBP11.49□□□□□ -0.57
DDX39B-215ENST00000462256 NBR1Q14596 966 aa11.49□□□□□ -0.57
DDX39B-215ENST00000462256 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
DDX39B-215ENST00000462256 IFIT5Q13325 482 aaKnown RBP11.49□□□□□ -0.57
DDX39B-215ENST00000462256 CCDC184Q52MB2 194 aa11.49□□□□□ -0.57
DDX39B-215ENST00000462256 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX39B-215ENST00000462256 PI4KAP2A4QPH2 592 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 ADRA2BP18089 450 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■□□□□ 11
DDX39B-215ENST00000462256 CCDC152Q4G0S7 254 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 PI4KAP1Q8N8J0 262 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 MYO5BQ9ULV0 1848 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 FLIIQ13045 1269 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 HSP90AB4PQ58FF6 505 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 MAP3K2Q9Y2U5 619 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 LTBP4Q8N2S1 1624 aa11.48□□□□□ -0.57
DDX39B-215ENST00000462256 C2CD5Q86YS7 1000 aa11.47□□□□□ -0.57
DDX39B-215ENST00000462256 PHLPP1O60346 1717 aa11.47□□□□□ -0.57
DDX39B-215ENST00000462256 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
DDX39B-215ENST00000462256 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
DDX39B-215ENST00000462256 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
DDX39B-215ENST00000462256 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.47□□□□□ -0.57
DDX39B-215ENST00000462256 IL6STP40189 918 aaPredicted RBP11.47□□□□□ -0.57
DDX39B-215ENST00000462256 CASC1Q6TDU7 716 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 UBE3BQ7Z3V4 1068 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 RBM17Q96I25 401 aaKnown RBP11.46□□□□□ -0.57
DDX39B-215ENST00000462256 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 ROBO1Q9Y6N7 1651 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 SSFA2P28290 1259 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
DDX39B-215ENST00000462256 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.58
DDX39B-215ENST00000462256 PLSCR1O15162 318 aa11.46□□□□□ -0.58
DDX39B-215ENST00000462256 DDX19BQ9UMR2 479 aa11.46□□□□□ -0.58
DDX39B-215ENST00000462256 NSFL1CQ9UNZ2 370 aaKnown RBP11.46□□□□□ -0.58
DDX39B-215ENST00000462256 SERPINB2P05120 415 aa11.45□□□□□ -0.58
DDX39B-215ENST00000462256 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
DDX39B-215ENST00000462256 ZC3H12CQ9C0D7 883 aaKnown RBP11.45□□□□□ -0.58
DDX39B-215ENST00000462256 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
DDX39B-215ENST00000462256 IL16Q14005 1332 aa11.45□□□□□ -0.58
DDX39B-215ENST00000462256 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
DDX39B-215ENST00000462256 IFIT2P09913 472 aaKnown RBP11.45□□□□□ -0.58
DDX39B-215ENST00000462256 LMOD1P29536 600 aaPredicted RBP11.45□□□□□ -0.58
DDX39B-215ENST00000462256 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
DDX39B-215ENST00000462256 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
DDX39B-215ENST00000462256 TMOD2Q9NZR1 351 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 KCNQ3O43525 872 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 HOXB7P09629 217 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 METTL24Q5JXM2 366 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 COG6Q9Y2V7 657 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 LRRFIP1Q32MZ4 808 aaKnown RBP11.44□□□□□ -0.58
DDX39B-215ENST00000462256 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 UPF2Q9HAU5 1272 aaKnown RBP11.44□□□□□ -0.58
DDX39B-215ENST00000462256 GNAI2P04899 355 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 EIF4A1P60842 406 aaKnown RBP11.44□□□□□ -0.58
DDX39B-215ENST00000462256 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 EYA3Q99504 573 aa11.44□□□□□ -0.58
DDX39B-215ENST00000462256 SRP68Q9UHB9 627 aaKnown RBP11.44□□□□□ -0.58
DDX39B-215ENST00000462256 KIF1AQ12756 1690 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 F6X3S4 739 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 GRIN3BO60391 1043 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 SURF6O75683 361 aaKnown RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 DALRD3Q5D0E6 543 aaKnown RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 NOB1Q9ULX3 412 aaKnown RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 CDK12Q9NYV4 1490 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms